Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0171

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0168 and B158DRAFT_0169 are separated by 63 nucleotidesB158DRAFT_0169 and B158DRAFT_0170 are separated by 11 nucleotidesB158DRAFT_0170 and B158DRAFT_0171 are separated by 25 nucleotidesB158DRAFT_0171 and B158DRAFT_0172 are separated by 19 nucleotides B158DRAFT_0168: B158DRAFT_0168 - Dicarboxylate transport., at 165,560 to 168,199 _0168 B158DRAFT_0169: B158DRAFT_0169 - hypothetical protein, at 168,263 to 168,457 _0169 B158DRAFT_0170: B158DRAFT_0170 - Uncharacterized protein conserved in bacteria, at 168,469 to 168,801 _0170 B158DRAFT_0171: B158DRAFT_0171 - Glutathione S-transferase, at 168,827 to 169,423 _0171 B158DRAFT_0172: B158DRAFT_0172 - ATPases of the AAA+ class, at 169,443 to 170,942 _0172 Position (kb) 168 169 170Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 168.029 kb on + strandat 168.029 kb on - strandat 168.238 kb on + strandat 168.284 kb on + strand, within B158DRAFT_0169at 168.307 kb on + strand, within B158DRAFT_0169at 168.330 kb on - strand, within B158DRAFT_0169at 168.421 kb on + strand, within B158DRAFT_0169at 168.454 kb on - strandat 168.531 kb on - strand, within B158DRAFT_0170at 168.535 kb on + strand, within B158DRAFT_0170at 168.545 kb on + strand, within B158DRAFT_0170at 168.553 kb on - strand, within B158DRAFT_0170at 168.561 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.573 kb on - strand, within B158DRAFT_0170at 168.640 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.743 kb on - strand, within B158DRAFT_0170at 168.839 kb on - strandat 168.934 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.975 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.113 kb on + strand, within B158DRAFT_0171at 169.114 kb on - strand, within B158DRAFT_0171at 169.141 kb on + strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.440 kb on - strandat 169.508 kb on - strandat 169.548 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.625 kb on + strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.713 kb on + strand, within B158DRAFT_0172at 169.854 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.866 kb on + strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.874 kb on - strand, within B158DRAFT_0172at 169.874 kb on - strand, within B158DRAFT_0172at 170.021 kb on - strand, within B158DRAFT_0172at 170.105 kb on - strand, within B158DRAFT_0172at 170.114 kb on + strand, within B158DRAFT_0172at 170.114 kb on + strand, within B158DRAFT_0172at 170.117 kb on - strand, within B158DRAFT_0172at 170.185 kb on - strand, within B158DRAFT_0172at 170.199 kb on + strand, within B158DRAFT_0172at 170.199 kb on + strand, within B158DRAFT_0172at 170.206 kb on + strand, within B158DRAFT_0172at 170.359 kb on - strand, within B158DRAFT_0172at 170.366 kb on + strand, within B158DRAFT_0172at 170.399 kb on + strand, within B158DRAFT_0172at 170.407 kb on - strand, within B158DRAFT_0172

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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168,029 + -1.4
168,029 - +0.3
168,238 + -0.5
168,284 + B158DRAFT_0169 0.11 -0.4
168,307 + B158DRAFT_0169 0.23 -1.1
168,330 - B158DRAFT_0169 0.34 +0.5
168,421 + B158DRAFT_0169 0.81 -2.1
168,454 - -1.2
168,531 - B158DRAFT_0170 0.19 +3.6
168,535 + B158DRAFT_0170 0.20 -2.3
168,545 + B158DRAFT_0170 0.23 +0.6
168,553 - B158DRAFT_0170 0.25 -0.6
168,561 - B158DRAFT_0170 0.28 -0.7
168,567 - B158DRAFT_0170 0.29 -1.7
168,567 - B158DRAFT_0170 0.29 -0.8
168,573 - B158DRAFT_0170 0.31 -1.1
168,640 + B158DRAFT_0170 0.51 -0.1
168,735 + B158DRAFT_0170 0.80 -0.7
168,735 + B158DRAFT_0170 0.80 -0.5
168,743 - B158DRAFT_0170 0.82 -2.0
168,839 - +0.9
168,934 + B158DRAFT_0171 0.18 -0.5
168,944 + B158DRAFT_0171 0.20 -0.8
168,944 + B158DRAFT_0171 0.20 +0.3
168,944 + B158DRAFT_0171 0.20 -0.6
168,944 + B158DRAFT_0171 0.20 -1.1
168,944 + B158DRAFT_0171 0.20 -0.1
168,944 + B158DRAFT_0171 0.20 -0.9
168,952 - B158DRAFT_0171 0.21 -1.5
168,952 - B158DRAFT_0171 0.21 -2.8
168,952 - B158DRAFT_0171 0.21 -2.0
168,952 - B158DRAFT_0171 0.21 -0.7
168,952 - B158DRAFT_0171 0.21 -2.0
168,975 + B158DRAFT_0171 0.25 +1.0
168,997 + B158DRAFT_0171 0.28 -0.6
168,997 + B158DRAFT_0171 0.28 +0.3
168,997 + B158DRAFT_0171 0.28 -0.2
168,997 + B158DRAFT_0171 0.28 -0.1
169,005 - B158DRAFT_0171 0.30 +3.2
169,005 - B158DRAFT_0171 0.30 +0.9
169,083 - B158DRAFT_0171 0.43 -0.0
169,083 - B158DRAFT_0171 0.43 +0.2
169,083 - B158DRAFT_0171 0.43 -0.6
169,113 + B158DRAFT_0171 0.48 -0.4
169,114 - B158DRAFT_0171 0.48 -0.9
169,141 + B158DRAFT_0171 0.53 +0.8
169,280 - B158DRAFT_0171 0.76 -0.2
169,280 - B158DRAFT_0171 0.76 -0.8
169,440 - +0.7
169,508 - -0.0
169,548 + +1.7
169,585 + +0.4
169,585 + -1.6
169,585 + +3.7
169,585 + -0.4
169,585 + -1.3
169,585 + -1.5
169,585 + +0.1
169,585 + -0.8
169,585 + -0.6
169,585 + -0.6
169,587 + +0.6
169,587 + +0.6
169,587 + -2.7
169,593 - B158DRAFT_0172 0.10 -0.4
169,593 - B158DRAFT_0172 0.10 -3.2
169,593 - B158DRAFT_0172 0.10 +0.7
169,593 - B158DRAFT_0172 0.10 -0.2
169,593 - B158DRAFT_0172 0.10 +1.1
169,593 - B158DRAFT_0172 0.10 +0.1
169,593 - B158DRAFT_0172 0.10 -0.3
169,593 - B158DRAFT_0172 0.10 +0.0
169,593 - B158DRAFT_0172 0.10 +1.2
169,593 - B158DRAFT_0172 0.10 +4.6
169,593 - B158DRAFT_0172 0.10 +0.8
169,593 - B158DRAFT_0172 0.10 +1.0
169,624 + B158DRAFT_0172 0.12 +0.3
169,624 + B158DRAFT_0172 0.12 -1.1
169,625 + B158DRAFT_0172 0.12 +1.6
169,632 - B158DRAFT_0172 0.13 +0.1
169,632 - B158DRAFT_0172 0.13 -1.5
169,632 - B158DRAFT_0172 0.13 -0.3
169,632 - B158DRAFT_0172 0.13 -0.4
169,634 - B158DRAFT_0172 0.13 -0.5
169,634 - B158DRAFT_0172 0.13 -0.0
169,650 - B158DRAFT_0172 0.14 -1.9
169,650 - B158DRAFT_0172 0.14 +1.4
169,713 + B158DRAFT_0172 0.18 -0.9
169,854 + B158DRAFT_0172 0.27 +0.7
169,859 + B158DRAFT_0172 0.28 -2.2
169,859 + B158DRAFT_0172 0.28 -0.9
169,859 + B158DRAFT_0172 0.28 -0.6
169,859 + B158DRAFT_0172 0.28 -0.6
169,866 + B158DRAFT_0172 0.28 +0.0
169,867 - B158DRAFT_0172 0.28 -1.1
169,867 - B158DRAFT_0172 0.28 -1.8
169,867 - B158DRAFT_0172 0.28 -1.4
169,867 - B158DRAFT_0172 0.28 +0.5
169,867 - B158DRAFT_0172 0.28 -0.0
169,874 - B158DRAFT_0172 0.29 -1.6
169,874 - B158DRAFT_0172 0.29 +0.4
170,021 - B158DRAFT_0172 0.39 -2.4
170,105 - B158DRAFT_0172 0.44 -0.3
170,114 + B158DRAFT_0172 0.45 -0.5
170,114 + B158DRAFT_0172 0.45 +1.2
170,117 - B158DRAFT_0172 0.45 -1.0
170,185 - B158DRAFT_0172 0.49 -1.4
170,199 + B158DRAFT_0172 0.50 -0.1
170,199 + B158DRAFT_0172 0.50 +1.0
170,206 + B158DRAFT_0172 0.51 -2.8
170,359 - B158DRAFT_0172 0.61 -2.0
170,366 + B158DRAFT_0172 0.62 -0.8
170,399 + B158DRAFT_0172 0.64 -0.1
170,407 - B158DRAFT_0172 0.64 -3.0

Or see this region's nucleotide sequence