Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2719 and PfGW456L13_2720 are separated by 56 nucleotides PfGW456L13_2720 and PfGW456L13_2721 are separated by 248 nucleotides PfGW456L13_2721 and PfGW456L13_2722 are separated by 236 nucleotides
PfGW456L13_2719 - Multidrug resistance protein A, at 3,016,351 to 3,017,448
_2719
PfGW456L13_2720 - FIG01074225: hypothetical protein, at 3,017,505 to 3,019,037
_2720
PfGW456L13_2721 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 3,019,286 to 3,019,531
_2721
PfGW456L13_2722 - hypothetical protein, at 3,019,768 to 3,020,460
_2722
Position (kb)
3017
3018
3019
3020 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3016.534 kb on + strand, within PfGW456L13_2719 at 3016.534 kb on + strand, within PfGW456L13_2719 at 3016.535 kb on - strand, within PfGW456L13_2719 at 3016.535 kb on - strand, within PfGW456L13_2719 at 3016.535 kb on - strand, within PfGW456L13_2719 at 3016.579 kb on + strand, within PfGW456L13_2719 at 3016.580 kb on - strand, within PfGW456L13_2719 at 3016.580 kb on - strand, within PfGW456L13_2719 at 3016.580 kb on - strand, within PfGW456L13_2719 at 3016.580 kb on - strand, within PfGW456L13_2719 at 3016.657 kb on + strand, within PfGW456L13_2719 at 3016.965 kb on - strand, within PfGW456L13_2719 at 3017.052 kb on - strand, within PfGW456L13_2719 at 3017.193 kb on + strand, within PfGW456L13_2719 at 3017.194 kb on - strand, within PfGW456L13_2719 at 3017.194 kb on - strand, within PfGW456L13_2719 at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.592 kb on + strand at 3017.593 kb on - strand at 3017.593 kb on - strand at 3017.631 kb on + strand at 3017.632 kb on - strand at 3018.114 kb on + strand, within PfGW456L13_2720 at 3018.114 kb on + strand, within PfGW456L13_2720 at 3018.114 kb on + strand, within PfGW456L13_2720 at 3018.114 kb on + strand, within PfGW456L13_2720 at 3018.114 kb on + strand, within PfGW456L13_2720 at 3018.115 kb on - strand, within PfGW456L13_2720 at 3018.115 kb on - strand, within PfGW456L13_2720 at 3018.115 kb on - strand, within PfGW456L13_2720 at 3018.441 kb on + strand, within PfGW456L13_2720 at 3019.024 kb on + strand at 3019.024 kb on + strand at 3019.025 kb on - strand at 3019.085 kb on + strand at 3019.103 kb on + strand at 3019.149 kb on - strand at 3019.197 kb on + strand at 3019.197 kb on + strand at 3019.197 kb on + strand at 3019.198 kb on - strand at 3019.577 kb on + strand at 3019.593 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.695 kb on + strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.696 kb on - strand at 3019.744 kb on + strand at 3019.744 kb on + strand at 3019.744 kb on + strand at 3019.745 kb on - strand at 3019.745 kb on - strand at 3019.745 kb on - strand at 3019.745 kb on - strand at 3019.745 kb on - strand at 3019.824 kb on - strand at 3019.968 kb on - strand, within PfGW456L13_2722 at 3019.968 kb on - strand, within PfGW456L13_2722 at 3019.968 kb on - strand, within PfGW456L13_2722 at 3019.968 kb on - strand, within PfGW456L13_2722 at 3019.982 kb on + strand, within PfGW456L13_2722 at 3019.982 kb on + strand, within PfGW456L13_2722 at 3019.982 kb on + strand, within PfGW456L13_2722
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,016,534 + PfGW456L13_2719 0.17 +1.5 3,016,534 + PfGW456L13_2719 0.17 +0.5 3,016,535 - PfGW456L13_2719 0.17 -0.1 3,016,535 - PfGW456L13_2719 0.17 +1.5 3,016,535 - PfGW456L13_2719 0.17 -0.9 3,016,579 + PfGW456L13_2719 0.21 -0.0 3,016,580 - PfGW456L13_2719 0.21 -0.8 3,016,580 - PfGW456L13_2719 0.21 +0.3 3,016,580 - PfGW456L13_2719 0.21 +0.9 3,016,580 - PfGW456L13_2719 0.21 -0.4 3,016,657 + PfGW456L13_2719 0.28 +0.9 3,016,965 - PfGW456L13_2719 0.56 +0.1 3,017,052 - PfGW456L13_2719 0.64 +0.7 3,017,193 + PfGW456L13_2719 0.77 +0.2 3,017,194 - PfGW456L13_2719 0.77 -1.7 3,017,194 - PfGW456L13_2719 0.77 -0.3 3,017,592 + -0.3 3,017,592 + -0.0 3,017,592 + -1.9 3,017,592 + +1.2 3,017,592 + -1.1 3,017,592 + +0.3 3,017,592 + +0.1 3,017,593 - +0.2 3,017,593 - -1.8 3,017,631 + +0.4 3,017,632 - +0.3 3,018,114 + PfGW456L13_2720 0.40 -0.5 3,018,114 + PfGW456L13_2720 0.40 -0.7 3,018,114 + PfGW456L13_2720 0.40 +0.6 3,018,114 + PfGW456L13_2720 0.40 +1.2 3,018,114 + PfGW456L13_2720 0.40 -0.4 3,018,115 - PfGW456L13_2720 0.40 -0.6 3,018,115 - PfGW456L13_2720 0.40 +0.2 3,018,115 - PfGW456L13_2720 0.40 +1.8 3,018,441 + PfGW456L13_2720 0.61 -0.1 3,019,024 + -1.8 3,019,024 + -0.5 3,019,025 - +0.4 3,019,085 + -0.8 3,019,103 + -0.0 3,019,149 - -0.0 3,019,197 + +0.2 3,019,197 + +0.5 3,019,197 + +0.4 3,019,198 - -0.3 3,019,577 + +0.3 3,019,593 + +0.9 3,019,695 + -1.4 3,019,695 + -0.4 3,019,695 + +2.5 3,019,695 + -1.1 3,019,695 + +1.1 3,019,695 + -0.9 3,019,695 + +0.9 3,019,695 + +0.2 3,019,696 - -0.2 3,019,696 - +0.9 3,019,696 - -1.1 3,019,696 - -0.2 3,019,696 - -0.1 3,019,696 - -2.4 3,019,696 - +1.6 3,019,696 - -0.5 3,019,696 - -1.8 3,019,744 + -0.5 3,019,744 + +0.2 3,019,744 + +0.5 3,019,745 - -0.4 3,019,745 - -0.1 3,019,745 - +0.3 3,019,745 - -1.6 3,019,745 - -1.1 3,019,824 - -0.5 3,019,968 - PfGW456L13_2722 0.29 +0.5 3,019,968 - PfGW456L13_2722 0.29 +1.1 3,019,968 - PfGW456L13_2722 0.29 +1.0 3,019,968 - PfGW456L13_2722 0.29 +1.0 3,019,982 + PfGW456L13_2722 0.31 -1.1 3,019,982 + PfGW456L13_2722 0.31 +1.3 3,019,982 + PfGW456L13_2722 0.31 +0.9
Or see this region's nucleotide sequence