Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2394

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2392 and B158DRAFT_2393 are separated by 0 nucleotidesB158DRAFT_2393 and B158DRAFT_2394 are separated by 21 nucleotidesB158DRAFT_2394 and B158DRAFT_2395 are separated by 57 nucleotides B158DRAFT_2392: B158DRAFT_2392 - Uncharacterized low-complexity proteins, at 561,077 to 562,828 _2392 B158DRAFT_2393: B158DRAFT_2393 - hypothetical protein, at 562,829 to 563,716 _2393 B158DRAFT_2394: B158DRAFT_2394 - diguanylate cyclase (GGDEF) domain, at 563,738 to 566,089 _2394 B158DRAFT_2395: B158DRAFT_2395 - phosphoenolpyruvate carboxykinase (ATP), at 566,147 to 567,748 _2395 Position (kb) 563 564 565 566 567Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 562.804 kb on - strandat 562.807 kb on + strandat 562.966 kb on + strand, within B158DRAFT_2393at 562.979 kb on - strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.061 kb on - strand, within B158DRAFT_2393at 563.302 kb on + strand, within B158DRAFT_2393at 563.310 kb on - strand, within B158DRAFT_2393at 563.350 kb on - strand, within B158DRAFT_2393at 563.390 kb on - strand, within B158DRAFT_2393at 563.390 kb on - strand, within B158DRAFT_2393at 563.432 kb on - strand, within B158DRAFT_2393at 563.453 kb on - strand, within B158DRAFT_2393at 563.453 kb on - strand, within B158DRAFT_2393at 563.455 kb on + strand, within B158DRAFT_2393at 563.505 kb on - strand, within B158DRAFT_2393at 563.522 kb on + strand, within B158DRAFT_2393at 563.537 kb on + strand, within B158DRAFT_2393at 563.537 kb on + strand, within B158DRAFT_2393at 563.545 kb on - strand, within B158DRAFT_2393at 563.560 kb on + strand, within B158DRAFT_2393at 563.570 kb on - strand, within B158DRAFT_2393at 563.579 kb on + strand, within B158DRAFT_2393at 563.677 kb on + strandat 563.677 kb on + strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.720 kb on - strandat 563.841 kb on + strandat 563.953 kb on + strandat 564.016 kb on + strand, within B158DRAFT_2394at 564.019 kb on - strand, within B158DRAFT_2394at 564.025 kb on + strand, within B158DRAFT_2394at 564.031 kb on + strand, within B158DRAFT_2394at 564.165 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.283 kb on - strand, within B158DRAFT_2394at 564.544 kb on + strand, within B158DRAFT_2394at 564.724 kb on - strand, within B158DRAFT_2394at 564.724 kb on - strand, within B158DRAFT_2394at 564.762 kb on - strand, within B158DRAFT_2394at 564.796 kb on - strand, within B158DRAFT_2394at 564.796 kb on - strand, within B158DRAFT_2394at 564.851 kb on + strand, within B158DRAFT_2394at 564.870 kb on + strand, within B158DRAFT_2394at 564.917 kb on - strand, within B158DRAFT_2394at 564.932 kb on - strand, within B158DRAFT_2394at 565.042 kb on + strand, within B158DRAFT_2394at 565.060 kb on + strand, within B158DRAFT_2394at 565.068 kb on - strand, within B158DRAFT_2394at 565.068 kb on - strand, within B158DRAFT_2394at 565.068 kb on - strand, within B158DRAFT_2394at 565.068 kb on - strand, within B158DRAFT_2394at 565.080 kb on + strand, within B158DRAFT_2394at 565.226 kb on + strand, within B158DRAFT_2394at 565.347 kb on - strand, within B158DRAFT_2394at 565.452 kb on - strand, within B158DRAFT_2394at 565.539 kb on + strand, within B158DRAFT_2394at 565.571 kb on + strand, within B158DRAFT_2394at 565.571 kb on + strand, within B158DRAFT_2394at 565.571 kb on + strand, within B158DRAFT_2394at 565.571 kb on + strand, within B158DRAFT_2394at 565.647 kb on + strand, within B158DRAFT_2394at 565.704 kb on + strand, within B158DRAFT_2394at 565.931 kb on + strandat 566.065 kb on - strandat 566.176 kb on - strandat 566.300 kb on + strandat 566.363 kb on + strand, within B158DRAFT_2395at 566.365 kb on + strand, within B158DRAFT_2395at 566.368 kb on + strand, within B158DRAFT_2395at 566.371 kb on - strand, within B158DRAFT_2395at 566.426 kb on - strand, within B158DRAFT_2395at 566.446 kb on - strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.448 kb on + strand, within B158DRAFT_2395at 566.456 kb on - strand, within B158DRAFT_2395at 566.456 kb on - strand, within B158DRAFT_2395at 566.456 kb on - strand, within B158DRAFT_2395at 566.500 kb on + strand, within B158DRAFT_2395at 566.558 kb on + strand, within B158DRAFT_2395at 566.593 kb on - strand, within B158DRAFT_2395at 566.625 kb on - strand, within B158DRAFT_2395at 566.632 kb on - strand, within B158DRAFT_2395at 566.718 kb on + strand, within B158DRAFT_2395at 566.718 kb on + strand, within B158DRAFT_2395at 566.726 kb on - strand, within B158DRAFT_2395at 566.990 kb on - strand, within B158DRAFT_2395at 566.990 kb on - strand, within B158DRAFT_2395at 566.992 kb on - strand, within B158DRAFT_2395at 567.014 kb on - strand, within B158DRAFT_2395at 567.071 kb on + strand, within B158DRAFT_2395at 567.071 kb on + strand, within B158DRAFT_2395at 567.084 kb on - strand, within B158DRAFT_2395at 567.084 kb on - strand, within B158DRAFT_2395

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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562,804 - +1.9
562,807 + +2.2
562,966 + B158DRAFT_2393 0.15 -1.1
562,979 - B158DRAFT_2393 0.17 +5.6
563,053 + B158DRAFT_2393 0.25 +3.2
563,053 + B158DRAFT_2393 0.25 +2.5
563,053 + B158DRAFT_2393 0.25 +3.5
563,053 + B158DRAFT_2393 0.25 +3.6
563,061 - B158DRAFT_2393 0.26 -0.5
563,302 + B158DRAFT_2393 0.53 +1.4
563,310 - B158DRAFT_2393 0.54 +6.4
563,350 - B158DRAFT_2393 0.59 +3.9
563,390 - B158DRAFT_2393 0.63 +0.3
563,390 - B158DRAFT_2393 0.63 +5.3
563,432 - B158DRAFT_2393 0.68 +2.7
563,453 - B158DRAFT_2393 0.70 +4.6
563,453 - B158DRAFT_2393 0.70 +5.3
563,455 + B158DRAFT_2393 0.70 -0.2
563,505 - B158DRAFT_2393 0.76 +3.6
563,522 + B158DRAFT_2393 0.78 +0.7
563,537 + B158DRAFT_2393 0.80 +1.7
563,537 + B158DRAFT_2393 0.80 +0.3
563,545 - B158DRAFT_2393 0.81 +3.3
563,560 + B158DRAFT_2393 0.82 +2.2
563,570 - B158DRAFT_2393 0.83 +4.8
563,579 + B158DRAFT_2393 0.84 +1.7
563,677 + +2.4
563,677 + -0.5
563,685 - -0.3
563,685 - +1.9
563,685 - +0.6
563,685 - +2.2
563,685 - +0.3
563,685 - +0.3
563,720 - +5.2
563,841 + +6.9
563,953 + -1.9
564,016 + B158DRAFT_2394 0.12 +4.7
564,019 - B158DRAFT_2394 0.12 +4.4
564,025 + B158DRAFT_2394 0.12 +4.9
564,031 + B158DRAFT_2394 0.12 +4.7
564,165 + B158DRAFT_2394 0.18 +0.4
564,275 + B158DRAFT_2394 0.23 +6.3
564,275 + B158DRAFT_2394 0.23 +5.0
564,275 + B158DRAFT_2394 0.23 +3.1
564,275 + B158DRAFT_2394 0.23 +1.9
564,283 - B158DRAFT_2394 0.23 +7.6
564,544 + B158DRAFT_2394 0.34 +4.5
564,724 - B158DRAFT_2394 0.42 +6.5
564,724 - B158DRAFT_2394 0.42 +7.3
564,762 - B158DRAFT_2394 0.44 +4.9
564,796 - B158DRAFT_2394 0.45 +6.6
564,796 - B158DRAFT_2394 0.45 +3.6
564,851 + B158DRAFT_2394 0.47 +6.1
564,870 + B158DRAFT_2394 0.48 -0.9
564,917 - B158DRAFT_2394 0.50 +1.7
564,932 - B158DRAFT_2394 0.51 +6.4
565,042 + B158DRAFT_2394 0.55 +5.9
565,060 + B158DRAFT_2394 0.56 -1.8
565,068 - B158DRAFT_2394 0.57 +4.7
565,068 - B158DRAFT_2394 0.57 +4.2
565,068 - B158DRAFT_2394 0.57 +7.6
565,068 - B158DRAFT_2394 0.57 +5.5
565,080 + B158DRAFT_2394 0.57 +5.6
565,226 + B158DRAFT_2394 0.63 +6.2
565,347 - B158DRAFT_2394 0.68 +5.5
565,452 - B158DRAFT_2394 0.73 +2.9
565,539 + B158DRAFT_2394 0.77 +5.5
565,571 + B158DRAFT_2394 0.78 +5.0
565,571 + B158DRAFT_2394 0.78 +0.8
565,571 + B158DRAFT_2394 0.78 +5.8
565,571 + B158DRAFT_2394 0.78 +5.7
565,647 + B158DRAFT_2394 0.81 +3.6
565,704 + B158DRAFT_2394 0.84 +5.0
565,931 + +5.9
566,065 - +4.5
566,176 - +2.0
566,300 + -2.7
566,363 + B158DRAFT_2395 0.13 +1.7
566,365 + B158DRAFT_2395 0.14 +4.5
566,368 + B158DRAFT_2395 0.14 +3.3
566,371 - B158DRAFT_2395 0.14 -1.1
566,426 - B158DRAFT_2395 0.17 +2.6
566,446 - B158DRAFT_2395 0.19 +0.3
566,448 + B158DRAFT_2395 0.19 +5.5
566,448 + B158DRAFT_2395 0.19 +1.8
566,448 + B158DRAFT_2395 0.19 +0.7
566,448 + B158DRAFT_2395 0.19 +4.0
566,448 + B158DRAFT_2395 0.19 +2.3
566,448 + B158DRAFT_2395 0.19 +0.7
566,456 - B158DRAFT_2395 0.19 +2.5
566,456 - B158DRAFT_2395 0.19 +3.8
566,456 - B158DRAFT_2395 0.19 -1.5
566,500 + B158DRAFT_2395 0.22 -0.5
566,558 + B158DRAFT_2395 0.26 +2.8
566,593 - B158DRAFT_2395 0.28 -1.2
566,625 - B158DRAFT_2395 0.30 +1.9
566,632 - B158DRAFT_2395 0.30 +0.1
566,718 + B158DRAFT_2395 0.36 +2.6
566,718 + B158DRAFT_2395 0.36 +2.9
566,726 - B158DRAFT_2395 0.36 +3.9
566,990 - B158DRAFT_2395 0.53 +4.6
566,990 - B158DRAFT_2395 0.53 +0.5
566,992 - B158DRAFT_2395 0.53 +1.2
567,014 - B158DRAFT_2395 0.54 -1.1
567,071 + B158DRAFT_2395 0.58 +1.2
567,071 + B158DRAFT_2395 0.58 +2.0
567,084 - B158DRAFT_2395 0.58 +2.4
567,084 - B158DRAFT_2395 0.58 +4.8

Or see this region's nucleotide sequence