Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1941

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1940 and B158DRAFT_1941 are separated by 164 nucleotidesB158DRAFT_1941 and B158DRAFT_1942 are separated by 321 nucleotides B158DRAFT_1940: B158DRAFT_1940 - Gametolysin peptidase M11., at 75,090 to 77,096 _1940 B158DRAFT_1941: B158DRAFT_1941 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 77,261 to 78,607 _1941 B158DRAFT_1942: B158DRAFT_1942 - Cytochrome B561, at 78,929 to 79,459 _1942 Position (kb) 77 78 79Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 76.263 kb on + strand, within B158DRAFT_1940at 76.271 kb on - strand, within B158DRAFT_1940at 76.271 kb on - strand, within B158DRAFT_1940at 76.291 kb on + strand, within B158DRAFT_1940at 76.311 kb on - strand, within B158DRAFT_1940at 76.323 kb on + strand, within B158DRAFT_1940at 76.340 kb on - strand, within B158DRAFT_1940at 76.354 kb on - strand, within B158DRAFT_1940at 76.367 kb on - strand, within B158DRAFT_1940at 76.379 kb on + strand, within B158DRAFT_1940at 76.425 kb on + strand, within B158DRAFT_1940at 76.430 kb on + strand, within B158DRAFT_1940at 76.433 kb on - strand, within B158DRAFT_1940at 76.438 kb on - strand, within B158DRAFT_1940at 76.438 kb on - strand, within B158DRAFT_1940at 76.478 kb on - strand, within B158DRAFT_1940at 76.528 kb on + strand, within B158DRAFT_1940at 76.536 kb on - strand, within B158DRAFT_1940at 76.545 kb on + strand, within B158DRAFT_1940at 76.562 kb on - strand, within B158DRAFT_1940at 76.648 kb on + strand, within B158DRAFT_1940at 76.656 kb on - strand, within B158DRAFT_1940at 76.750 kb on + strand, within B158DRAFT_1940at 76.755 kb on + strand, within B158DRAFT_1940at 76.758 kb on - strand, within B158DRAFT_1940at 76.758 kb on - strand, within B158DRAFT_1940at 76.762 kb on + strand, within B158DRAFT_1940at 76.762 kb on + strand, within B158DRAFT_1940at 76.762 kb on + strand, within B158DRAFT_1940at 76.762 kb on + strand, within B158DRAFT_1940at 76.765 kb on - strand, within B158DRAFT_1940at 76.770 kb on - strand, within B158DRAFT_1940at 76.833 kb on - strand, within B158DRAFT_1940at 76.839 kb on - strand, within B158DRAFT_1940at 76.926 kb on - strandat 76.938 kb on - strandat 76.942 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.011 kb on + strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.019 kb on - strandat 77.063 kb on - strandat 77.096 kb on + strandat 77.278 kb on - strandat 77.401 kb on - strand, within B158DRAFT_1941at 77.404 kb on + strand, within B158DRAFT_1941at 77.412 kb on - strand, within B158DRAFT_1941at 77.412 kb on - strand, within B158DRAFT_1941at 77.529 kb on + strand, within B158DRAFT_1941at 77.529 kb on + strand, within B158DRAFT_1941at 77.582 kb on + strand, within B158DRAFT_1941at 77.590 kb on - strand, within B158DRAFT_1941at 77.733 kb on + strand, within B158DRAFT_1941at 77.734 kb on + strand, within B158DRAFT_1941at 77.852 kb on - strand, within B158DRAFT_1941at 77.895 kb on + strand, within B158DRAFT_1941at 77.895 kb on + strand, within B158DRAFT_1941at 77.930 kb on + strand, within B158DRAFT_1941at 77.967 kb on - strand, within B158DRAFT_1941at 78.013 kb on + strand, within B158DRAFT_1941at 78.094 kb on - strand, within B158DRAFT_1941at 78.142 kb on - strand, within B158DRAFT_1941at 78.176 kb on + strand, within B158DRAFT_1941at 78.184 kb on - strand, within B158DRAFT_1941at 78.184 kb on - strand, within B158DRAFT_1941at 78.184 kb on - strand, within B158DRAFT_1941at 78.281 kb on - strand, within B158DRAFT_1941at 78.893 kb on - strandat 78.990 kb on - strand, within B158DRAFT_1942at 79.001 kb on + strand, within B158DRAFT_1942at 79.105 kb on + strand, within B158DRAFT_1942at 79.105 kb on + strand, within B158DRAFT_1942at 79.112 kb on + strand, within B158DRAFT_1942at 79.140 kb on + strand, within B158DRAFT_1942at 79.179 kb on + strand, within B158DRAFT_1942at 79.292 kb on + strand, within B158DRAFT_1942at 79.292 kb on + strand, within B158DRAFT_1942at 79.292 kb on + strand, within B158DRAFT_1942at 79.292 kb on + strand, within B158DRAFT_1942at 79.292 kb on + strand, within B158DRAFT_1942at 79.300 kb on - strand, within B158DRAFT_1942at 79.300 kb on - strand, within B158DRAFT_1942at 79.300 kb on - strand, within B158DRAFT_1942at 79.300 kb on - strand, within B158DRAFT_1942at 79.300 kb on - strand, within B158DRAFT_1942at 79.410 kb on - strandat 79.555 kb on + strandat 79.559 kb on + strandat 79.564 kb on + strandat 79.565 kb on + strandat 79.568 kb on - strandat 79.570 kb on + strandat 79.573 kb on - strandat 79.590 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
76,263 + B158DRAFT_1940 0.58 -2.4
76,271 - B158DRAFT_1940 0.59 -0.0
76,271 - B158DRAFT_1940 0.59 +0.0
76,291 + B158DRAFT_1940 0.60 -1.5
76,311 - B158DRAFT_1940 0.61 +0.4
76,323 + B158DRAFT_1940 0.61 -0.5
76,340 - B158DRAFT_1940 0.62 +1.0
76,354 - B158DRAFT_1940 0.63 -0.9
76,367 - B158DRAFT_1940 0.64 -0.2
76,379 + B158DRAFT_1940 0.64 +0.1
76,425 + B158DRAFT_1940 0.67 -2.1
76,430 + B158DRAFT_1940 0.67 -0.1
76,433 - B158DRAFT_1940 0.67 -0.2
76,438 - B158DRAFT_1940 0.67 +0.9
76,438 - B158DRAFT_1940 0.67 +0.2
76,478 - B158DRAFT_1940 0.69 +0.1
76,528 + B158DRAFT_1940 0.72 -0.2
76,536 - B158DRAFT_1940 0.72 -0.7
76,545 + B158DRAFT_1940 0.72 +0.2
76,562 - B158DRAFT_1940 0.73 -2.1
76,648 + B158DRAFT_1940 0.78 +0.2
76,656 - B158DRAFT_1940 0.78 +0.9
76,750 + B158DRAFT_1940 0.83 -0.0
76,755 + B158DRAFT_1940 0.83 -1.6
76,758 - B158DRAFT_1940 0.83 -1.4
76,758 - B158DRAFT_1940 0.83 -1.6
76,762 + B158DRAFT_1940 0.83 +0.5
76,762 + B158DRAFT_1940 0.83 -1.0
76,762 + B158DRAFT_1940 0.83 -0.7
76,762 + B158DRAFT_1940 0.83 +0.1
76,765 - B158DRAFT_1940 0.83 +0.3
76,770 - B158DRAFT_1940 0.84 -0.1
76,833 - B158DRAFT_1940 0.87 -1.8
76,839 - B158DRAFT_1940 0.87 -1.2
76,926 - -1.1
76,938 - +0.5
76,942 + -0.3
77,011 + -0.7
77,011 + -0.2
77,011 + -1.2
77,011 + -0.3
77,011 + -0.9
77,011 + -0.9
77,011 + -1.0
77,019 - -1.4
77,019 - -0.7
77,019 - -0.9
77,019 - -0.4
77,019 - -0.1
77,019 - -0.8
77,019 - -0.5
77,019 - -0.0
77,063 - -1.1
77,096 + +0.9
77,278 - -0.7
77,401 - B158DRAFT_1941 0.10 +0.2
77,404 + B158DRAFT_1941 0.11 +1.8
77,412 - B158DRAFT_1941 0.11 -0.2
77,412 - B158DRAFT_1941 0.11 +1.1
77,529 + B158DRAFT_1941 0.20 -1.7
77,529 + B158DRAFT_1941 0.20 -0.7
77,582 + B158DRAFT_1941 0.24 -0.4
77,590 - B158DRAFT_1941 0.24 +1.5
77,733 + B158DRAFT_1941 0.35 +0.6
77,734 + B158DRAFT_1941 0.35 +0.3
77,852 - B158DRAFT_1941 0.44 +1.8
77,895 + B158DRAFT_1941 0.47 -1.4
77,895 + B158DRAFT_1941 0.47 +0.3
77,930 + B158DRAFT_1941 0.50 -0.7
77,967 - B158DRAFT_1941 0.52 +0.9
78,013 + B158DRAFT_1941 0.56 +0.2
78,094 - B158DRAFT_1941 0.62 -0.4
78,142 - B158DRAFT_1941 0.65 -1.9
78,176 + B158DRAFT_1941 0.68 -2.9
78,184 - B158DRAFT_1941 0.69 -0.7
78,184 - B158DRAFT_1941 0.69 +0.4
78,184 - B158DRAFT_1941 0.69 +0.6
78,281 - B158DRAFT_1941 0.76 -1.8
78,893 - -0.9
78,990 - B158DRAFT_1942 0.11 +0.7
79,001 + B158DRAFT_1942 0.14 -0.1
79,105 + B158DRAFT_1942 0.33 -1.8
79,105 + B158DRAFT_1942 0.33 -0.9
79,112 + B158DRAFT_1942 0.34 -0.9
79,140 + B158DRAFT_1942 0.40 -1.0
79,179 + B158DRAFT_1942 0.47 +0.6
79,292 + B158DRAFT_1942 0.68 -0.4
79,292 + B158DRAFT_1942 0.68 +0.4
79,292 + B158DRAFT_1942 0.68 -0.5
79,292 + B158DRAFT_1942 0.68 -0.4
79,292 + B158DRAFT_1942 0.68 -3.2
79,300 - B158DRAFT_1942 0.70 +0.9
79,300 - B158DRAFT_1942 0.70 -1.0
79,300 - B158DRAFT_1942 0.70 -0.0
79,300 - B158DRAFT_1942 0.70 -1.4
79,300 - B158DRAFT_1942 0.70 -0.1
79,410 - +0.8
79,555 + +1.7
79,559 + -0.2
79,564 + -1.1
79,565 + -0.4
79,568 - -0.5
79,570 + -0.7
79,573 - -0.7
79,590 + -0.2

Or see this region's nucleotide sequence