Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1825 and B158DRAFT_1826 are separated by 99 nucleotides B158DRAFT_1826 and B158DRAFT_1827 are separated by 330 nucleotides B158DRAFT_1827 and B158DRAFT_1828 overlap by 4 nucleotides B158DRAFT_1828 and B158DRAFT_1829 are separated by 222 nucleotides
B158DRAFT_1825: B158DRAFT_1825 - hypothetical protein, at 1,925,632 to 1,925,985
_1825
B158DRAFT_1826: B158DRAFT_1826 - Cold shock proteins, at 1,926,085 to 1,926,291
_1826
B158DRAFT_1827: B158DRAFT_1827 - Domain of unknown function (DU1801)., at 1,926,622 to 1,927,050
_1827
B158DRAFT_1828: B158DRAFT_1828 - hypothetical protein, at 1,927,047 to 1,927,217
_1828
B158DRAFT_1829: B158DRAFT_1829 - thioredoxin-disulfide reductase, at 1,927,440 to 1,928,387
_1829
Position (kb)
1926
1927
1928 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.703 kb on - strand, within B158DRAFT_1825 at 1925.734 kb on - strand, within B158DRAFT_1825 at 1925.776 kb on - strand, within B158DRAFT_1825 at 1925.776 kb on - strand, within B158DRAFT_1825 at 1925.839 kb on + strand, within B158DRAFT_1825 at 1925.842 kb on - strand, within B158DRAFT_1825 at 1925.849 kb on - strand, within B158DRAFT_1825 at 1925.877 kb on - strand, within B158DRAFT_1825 at 1925.894 kb on + strand, within B158DRAFT_1825 at 1925.894 kb on + strand, within B158DRAFT_1825 at 1925.902 kb on - strand, within B158DRAFT_1825 at 1925.923 kb on + strand, within B158DRAFT_1825 at 1925.923 kb on + strand, within B158DRAFT_1825 at 1926.148 kb on + strand, within B158DRAFT_1826 at 1926.181 kb on + strand, within B158DRAFT_1826 at 1926.204 kb on - strand, within B158DRAFT_1826 at 1926.307 kb on - strand at 1926.354 kb on - strand at 1926.418 kb on + strand at 1926.548 kb on + strand at 1926.601 kb on - strand at 1926.603 kb on + strand at 1926.603 kb on + strand at 1926.611 kb on - strand at 1926.611 kb on - strand at 1926.613 kb on + strand at 1926.621 kb on - strand at 1926.621 kb on - strand at 1926.621 kb on - strand at 1926.656 kb on + strand at 1926.664 kb on - strand at 1926.670 kb on - strand, within B158DRAFT_1827 at 1926.684 kb on + strand, within B158DRAFT_1827 at 1926.740 kb on + strand, within B158DRAFT_1827 at 1926.743 kb on - strand, within B158DRAFT_1827 at 1926.748 kb on - strand, within B158DRAFT_1827 at 1926.748 kb on - strand, within B158DRAFT_1827 at 1926.785 kb on + strand, within B158DRAFT_1827 at 1926.834 kb on - strand, within B158DRAFT_1827 at 1926.845 kb on + strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.948 kb on - strand, within B158DRAFT_1827 at 1926.953 kb on - strand, within B158DRAFT_1827 at 1927.044 kb on - strand at 1927.046 kb on + strand at 1927.115 kb on + strand, within B158DRAFT_1828 at 1927.131 kb on + strand, within B158DRAFT_1828 at 1927.206 kb on - strand at 1927.231 kb on + strand at 1927.244 kb on + strand at 1927.306 kb on - strand at 1927.376 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,925,681 + B158DRAFT_1825 0.14 +1.3 1,925,681 + B158DRAFT_1825 0.14 +0.2 1,925,681 + B158DRAFT_1825 0.14 -0.3 1,925,703 - B158DRAFT_1825 0.20 -0.4 1,925,734 - B158DRAFT_1825 0.29 -1.1 1,925,776 - B158DRAFT_1825 0.41 -0.3 1,925,776 - B158DRAFT_1825 0.41 -1.6 1,925,839 + B158DRAFT_1825 0.58 -0.6 1,925,842 - B158DRAFT_1825 0.59 +1.2 1,925,849 - B158DRAFT_1825 0.61 +0.7 1,925,877 - B158DRAFT_1825 0.69 -0.7 1,925,894 + B158DRAFT_1825 0.74 +0.2 1,925,894 + B158DRAFT_1825 0.74 -0.8 1,925,902 - B158DRAFT_1825 0.76 -2.2 1,925,923 + B158DRAFT_1825 0.82 -1.2 1,925,923 + B158DRAFT_1825 0.82 +0.3 1,926,148 + B158DRAFT_1826 0.30 -2.7 1,926,181 + B158DRAFT_1826 0.46 -0.8 1,926,204 - B158DRAFT_1826 0.57 -1.7 1,926,307 - -0.5 1,926,354 - -3.7 1,926,418 + -1.2 1,926,548 + -0.7 1,926,601 - -0.6 1,926,603 + +0.4 1,926,603 + -0.6 1,926,611 - -1.6 1,926,611 - -2.4 1,926,613 + -0.6 1,926,621 - +0.7 1,926,621 - +0.7 1,926,621 - +0.4 1,926,656 + -1.7 1,926,664 - +3.7 1,926,670 - B158DRAFT_1827 0.11 +0.3 1,926,684 + B158DRAFT_1827 0.14 -0.7 1,926,740 + B158DRAFT_1827 0.28 -0.1 1,926,743 - B158DRAFT_1827 0.28 -2.2 1,926,748 - B158DRAFT_1827 0.29 -0.2 1,926,748 - B158DRAFT_1827 0.29 -0.8 1,926,785 + B158DRAFT_1827 0.38 +0.3 1,926,834 - B158DRAFT_1827 0.49 +0.6 1,926,845 + B158DRAFT_1827 0.52 -0.8 1,926,853 - B158DRAFT_1827 0.54 -2.0 1,926,853 - B158DRAFT_1827 0.54 -0.4 1,926,853 - B158DRAFT_1827 0.54 -1.0 1,926,853 - B158DRAFT_1827 0.54 -0.6 1,926,948 - B158DRAFT_1827 0.76 -0.2 1,926,953 - B158DRAFT_1827 0.77 -0.4 1,927,044 - -0.5 1,927,046 + -0.8 1,927,115 + B158DRAFT_1828 0.40 +1.6 1,927,131 + B158DRAFT_1828 0.49 +0.0 1,927,206 - -1.6 1,927,231 + -0.5 1,927,244 + -1.0 1,927,306 - -2.3 1,927,376 + +0.7
Or see this region's nucleotide sequence