Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1537 and B158DRAFT_1538 are separated by 126 nucleotides B158DRAFT_1538 and B158DRAFT_1539 are separated by 320 nucleotides B158DRAFT_1539 and B158DRAFT_1540 are separated by 184 nucleotides B158DRAFT_1540 and B158DRAFT_1541 are separated by 195 nucleotides
B158DRAFT_1537: B158DRAFT_1537 - hypothetical protein, at 1,591,864 to 1,592,316
_1537
B158DRAFT_1538: B158DRAFT_1538 - Uncharacterized conserved protein, at 1,592,443 to 1,592,655
_1538
B158DRAFT_1539: B158DRAFT_1539 - hypothetical protein, at 1,592,976 to 1,595,576
_1539
B158DRAFT_1540: B158DRAFT_1540 - hypothetical protein, at 1,595,761 to 1,596,012
_1540
B158DRAFT_1541: B158DRAFT_1541 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,596,208 to 1,596,966
_1541
Position (kb)
1592
1593
1594
1595
1596 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.958 kb on - strand at 1593.199 kb on - strand at 1593.419 kb on + strand, within B158DRAFT_1539 at 1593.608 kb on + strand, within B158DRAFT_1539 at 1593.641 kb on + strand, within B158DRAFT_1539 at 1593.748 kb on + strand, within B158DRAFT_1539 at 1594.109 kb on + strand, within B158DRAFT_1539 at 1594.117 kb on - strand, within B158DRAFT_1539 at 1594.326 kb on - strand, within B158DRAFT_1539 at 1594.378 kb on - strand, within B158DRAFT_1539 at 1594.658 kb on - strand, within B158DRAFT_1539 at 1594.770 kb on - strand, within B158DRAFT_1539 at 1594.857 kb on - strand, within B158DRAFT_1539 at 1595.017 kb on - strand, within B158DRAFT_1539 at 1595.094 kb on + strand, within B158DRAFT_1539 at 1595.102 kb on - strand, within B158DRAFT_1539 at 1595.108 kb on + strand, within B158DRAFT_1539 at 1595.224 kb on - strand, within B158DRAFT_1539 at 1595.438 kb on + strand at 1595.805 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.957 kb on - strand, within B158DRAFT_1540 at 1595.969 kb on - strand, within B158DRAFT_1540 at 1596.096 kb on + strand at 1596.117 kb on + strand at 1596.171 kb on + strand at 1596.179 kb on - strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.274 kb on - strand at 1596.281 kb on + strand at 1596.289 kb on - strand, within B158DRAFT_1541 at 1596.291 kb on + strand, within B158DRAFT_1541 at 1596.298 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.328 kb on + strand, within B158DRAFT_1541 at 1596.344 kb on + strand, within B158DRAFT_1541 at 1596.387 kb on + strand, within B158DRAFT_1541 at 1596.395 kb on - strand, within B158DRAFT_1541 at 1596.427 kb on + strand, within B158DRAFT_1541 at 1596.428 kb on + strand, within B158DRAFT_1541 at 1596.435 kb on - strand, within B158DRAFT_1541 at 1596.453 kb on + strand, within B158DRAFT_1541 at 1596.496 kb on - strand, within B158DRAFT_1541 at 1596.550 kb on - strand, within B158DRAFT_1541
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,592,944 + -1.1 1,592,944 + -0.1 1,592,944 + -1.4 1,592,944 + -1.0 1,592,958 - +1.1 1,593,199 - -1.3 1,593,419 + B158DRAFT_1539 0.17 +3.1 1,593,608 + B158DRAFT_1539 0.24 +2.0 1,593,641 + B158DRAFT_1539 0.26 -0.5 1,593,748 + B158DRAFT_1539 0.30 +4.4 1,594,109 + B158DRAFT_1539 0.44 -1.1 1,594,117 - B158DRAFT_1539 0.44 +1.8 1,594,326 - B158DRAFT_1539 0.52 -0.0 1,594,378 - B158DRAFT_1539 0.54 -0.1 1,594,658 - B158DRAFT_1539 0.65 +0.3 1,594,770 - B158DRAFT_1539 0.69 -1.1 1,594,857 - B158DRAFT_1539 0.72 -1.9 1,595,017 - B158DRAFT_1539 0.78 +0.5 1,595,094 + B158DRAFT_1539 0.81 -0.6 1,595,102 - B158DRAFT_1539 0.82 +0.7 1,595,108 + B158DRAFT_1539 0.82 -0.5 1,595,224 - B158DRAFT_1539 0.86 -2.3 1,595,438 + -1.8 1,595,805 + B158DRAFT_1540 0.17 -0.7 1,595,879 + B158DRAFT_1540 0.47 +0.6 1,595,879 + B158DRAFT_1540 0.47 +0.4 1,595,949 + B158DRAFT_1540 0.75 -0.8 1,595,949 + B158DRAFT_1540 0.75 -0.4 1,595,949 + B158DRAFT_1540 0.75 +0.2 1,595,957 - B158DRAFT_1540 0.78 +0.5 1,595,969 - B158DRAFT_1540 0.83 -1.7 1,596,096 + -0.3 1,596,117 + -0.8 1,596,171 + -2.0 1,596,179 - +3.5 1,596,261 + -1.5 1,596,261 + +0.5 1,596,261 + +0.1 1,596,261 + -2.8 1,596,261 + +1.9 1,596,261 + -0.3 1,596,261 + +2.4 1,596,261 + -0.5 1,596,261 + -0.7 1,596,261 + +0.0 1,596,261 + +0.2 1,596,261 + +0.2 1,596,261 + -1.2 1,596,261 + -1.5 1,596,261 + -1.4 1,596,261 + -1.2 1,596,261 + -2.5 1,596,261 + -0.9 1,596,261 + +0.1 1,596,261 + +1.9 1,596,261 + -2.1 1,596,261 + -0.5 1,596,261 + -0.6 1,596,261 + +1.1 1,596,261 + -0.6 1,596,261 + -3.5 1,596,261 + -1.9 1,596,261 + -0.3 1,596,261 + -0.6 1,596,261 + +0.5 1,596,261 + -1.2 1,596,261 + +0.6 1,596,269 - -0.4 1,596,269 - -0.1 1,596,269 - -1.5 1,596,269 - -1.5 1,596,269 - -0.4 1,596,269 - -0.6 1,596,269 - +1.7 1,596,269 - -3.1 1,596,269 - +0.2 1,596,269 - +0.0 1,596,269 - +0.6 1,596,269 - -1.0 1,596,269 - -1.8 1,596,269 - +0.7 1,596,269 - -0.9 1,596,269 - +1.8 1,596,269 - -0.7 1,596,269 - -1.6 1,596,269 - +0.6 1,596,269 - +0.2 1,596,269 - +0.9 1,596,269 - -1.0 1,596,269 - +1.7 1,596,274 - +0.4 1,596,281 + -0.6 1,596,289 - B158DRAFT_1541 0.11 -0.5 1,596,291 + B158DRAFT_1541 0.11 -1.0 1,596,298 + B158DRAFT_1541 0.12 +0.6 1,596,315 + B158DRAFT_1541 0.14 +1.7 1,596,315 + B158DRAFT_1541 0.14 +0.1 1,596,315 + B158DRAFT_1541 0.14 -1.9 1,596,328 + B158DRAFT_1541 0.16 -1.1 1,596,344 + B158DRAFT_1541 0.18 -0.3 1,596,387 + B158DRAFT_1541 0.24 -2.2 1,596,395 - B158DRAFT_1541 0.25 -0.2 1,596,427 + B158DRAFT_1541 0.29 -0.4 1,596,428 + B158DRAFT_1541 0.29 -0.7 1,596,435 - B158DRAFT_1541 0.30 -0.5 1,596,453 + B158DRAFT_1541 0.32 -1.5 1,596,496 - B158DRAFT_1541 0.38 +0.4 1,596,550 - B158DRAFT_1541 0.45 +0.2
Or see this region's nucleotide sequence