Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1333

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1331 and B158DRAFT_1332 are separated by 160 nucleotidesB158DRAFT_1332 and B158DRAFT_1333 are separated by 74 nucleotidesB158DRAFT_1333 and B158DRAFT_1334 are separated by 9 nucleotidesB158DRAFT_1334 and B158DRAFT_1335 are separated by 88 nucleotides B158DRAFT_1331: B158DRAFT_1331 - Cytochrome c biogenesis factor, at 1,372,773 to 1,373,798 _1331 B158DRAFT_1332: B158DRAFT_1332 - Uncharacterized low-complexity protein, at 1,373,959 to 1,374,324 _1332 B158DRAFT_1333: B158DRAFT_1333 - component of chlorite stress sensing system with B158DRAFT_1334 (DUF2063) (from data), at 1,374,399 to 1,375,244 _1333 B158DRAFT_1334: B158DRAFT_1334 - component of chlorite stress sensing system with PGA1_c21010 (DUF692) (from data), at 1,375,254 to 1,376,039 _1334 B158DRAFT_1335: B158DRAFT_1335 - Surface lipoprotein, at 1,376,128 to 1,376,856 _1335 Position (kb) 1374 1375 1376Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1373.405 kb on + strand, within B158DRAFT_1331at 1373.405 kb on + strand, within B158DRAFT_1331at 1373.405 kb on + strand, within B158DRAFT_1331at 1373.405 kb on + strand, within B158DRAFT_1331at 1373.413 kb on - strand, within B158DRAFT_1331at 1373.413 kb on - strand, within B158DRAFT_1331at 1373.413 kb on - strand, within B158DRAFT_1331at 1373.413 kb on - strand, within B158DRAFT_1331at 1373.413 kb on - strand, within B158DRAFT_1331at 1373.437 kb on - strand, within B158DRAFT_1331at 1373.520 kb on + strand, within B158DRAFT_1331at 1373.537 kb on + strand, within B158DRAFT_1331at 1373.542 kb on + strand, within B158DRAFT_1331at 1373.552 kb on + strand, within B158DRAFT_1331at 1373.572 kb on + strand, within B158DRAFT_1331at 1373.572 kb on + strand, within B158DRAFT_1331at 1373.588 kb on + strand, within B158DRAFT_1331at 1373.596 kb on - strand, within B158DRAFT_1331at 1373.611 kb on + strand, within B158DRAFT_1331at 1373.611 kb on + strand, within B158DRAFT_1331at 1373.611 kb on + strand, within B158DRAFT_1331at 1373.622 kb on - strand, within B158DRAFT_1331at 1373.634 kb on + strand, within B158DRAFT_1331at 1373.675 kb on - strand, within B158DRAFT_1331at 1373.692 kb on + strand, within B158DRAFT_1331at 1373.692 kb on + strand, within B158DRAFT_1331at 1373.692 kb on + strand, within B158DRAFT_1331at 1373.692 kb on + strand, within B158DRAFT_1331at 1373.700 kb on - strandat 1373.700 kb on - strandat 1373.700 kb on - strandat 1373.700 kb on - strandat 1373.702 kb on + strandat 1373.715 kb on - strandat 1373.755 kb on - strandat 1373.814 kb on + strandat 1373.995 kb on - strandat 1374.043 kb on + strand, within B158DRAFT_1332at 1374.057 kb on - strand, within B158DRAFT_1332at 1374.079 kb on + strand, within B158DRAFT_1332at 1374.088 kb on - strand, within B158DRAFT_1332at 1374.088 kb on - strand, within B158DRAFT_1332at 1374.132 kb on - strand, within B158DRAFT_1332at 1374.313 kb on + strandat 1374.313 kb on + strandat 1374.321 kb on - strandat 1374.321 kb on - strandat 1374.416 kb on + strandat 1374.429 kb on + strandat 1374.438 kb on - strandat 1374.438 kb on - strandat 1374.459 kb on - strandat 1374.461 kb on + strandat 1374.469 kb on - strandat 1374.469 kb on - strandat 1374.548 kb on + strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.591 kb on + strand, within B158DRAFT_1333at 1374.593 kb on + strand, within B158DRAFT_1333at 1374.601 kb on - strand, within B158DRAFT_1333at 1374.601 kb on - strand, within B158DRAFT_1333at 1374.607 kb on - strand, within B158DRAFT_1333at 1374.618 kb on + strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.675 kb on - strand, within B158DRAFT_1333at 1374.677 kb on + strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.687 kb on - strand, within B158DRAFT_1333at 1374.729 kb on - strand, within B158DRAFT_1333at 1374.802 kb on - strand, within B158DRAFT_1333at 1374.843 kb on + strand, within B158DRAFT_1333at 1374.851 kb on - strand, within B158DRAFT_1333at 1374.864 kb on + strand, within B158DRAFT_1333at 1374.864 kb on + strand, within B158DRAFT_1333at 1374.936 kb on - strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1375.035 kb on + strand, within B158DRAFT_1333at 1375.035 kb on + strand, within B158DRAFT_1333at 1375.043 kb on + strand, within B158DRAFT_1333at 1375.043 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.071 kb on - strand, within B158DRAFT_1333at 1375.075 kb on + strand, within B158DRAFT_1333at 1375.083 kb on + strand, within B158DRAFT_1333at 1375.083 kb on - strand, within B158DRAFT_1333at 1375.124 kb on + strand, within B158DRAFT_1333at 1375.124 kb on + strand, within B158DRAFT_1333at 1375.183 kb on + strandat 1375.193 kb on + strandat 1375.193 kb on + strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.239 kb on + strandat 1375.239 kb on + strandat 1375.247 kb on - strandat 1375.247 kb on - strandat 1375.255 kb on - strandat 1375.556 kb on + strand, within B158DRAFT_1334at 1375.566 kb on + strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.686 kb on + strand, within B158DRAFT_1334at 1375.885 kb on + strand, within B158DRAFT_1334at 1376.003 kb on + strandat 1376.035 kb on - strandat 1376.048 kb on - strandat 1376.126 kb on - strandat 1376.161 kb on + strandat 1376.169 kb on - strandat 1376.195 kb on + strandat 1376.221 kb on + strand, within B158DRAFT_1335at 1376.242 kb on - strand, within B158DRAFT_1335

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,373,405 + B158DRAFT_1331 0.62 -1.1
1,373,405 + B158DRAFT_1331 0.62 -1.1
1,373,405 + B158DRAFT_1331 0.62 -0.7
1,373,405 + B158DRAFT_1331 0.62 -1.5
1,373,413 - B158DRAFT_1331 0.62 -0.4
1,373,413 - B158DRAFT_1331 0.62 -1.4
1,373,413 - B158DRAFT_1331 0.62 -2.6
1,373,413 - B158DRAFT_1331 0.62 -0.3
1,373,413 - B158DRAFT_1331 0.62 -3.6
1,373,437 - B158DRAFT_1331 0.65 -1.8
1,373,520 + B158DRAFT_1331 0.73 +0.2
1,373,537 + B158DRAFT_1331 0.74 -0.8
1,373,542 + B158DRAFT_1331 0.75 -1.6
1,373,552 + B158DRAFT_1331 0.76 +2.0
1,373,572 + B158DRAFT_1331 0.78 -2.4
1,373,572 + B158DRAFT_1331 0.78 -1.9
1,373,588 + B158DRAFT_1331 0.79 -0.0
1,373,596 - B158DRAFT_1331 0.80 -1.1
1,373,611 + B158DRAFT_1331 0.82 -1.3
1,373,611 + B158DRAFT_1331 0.82 -2.2
1,373,611 + B158DRAFT_1331 0.82 -1.6
1,373,622 - B158DRAFT_1331 0.83 +0.2
1,373,634 + B158DRAFT_1331 0.84 -1.9
1,373,675 - B158DRAFT_1331 0.88 -1.5
1,373,692 + B158DRAFT_1331 0.90 -1.4
1,373,692 + B158DRAFT_1331 0.90 -1.9
1,373,692 + B158DRAFT_1331 0.90 -1.6
1,373,692 + B158DRAFT_1331 0.90 -2.7
1,373,700 - -0.0
1,373,700 - -2.6
1,373,700 - +0.1
1,373,700 - -0.6
1,373,702 + -1.9
1,373,715 - -3.2
1,373,755 - -2.8
1,373,814 + -0.2
1,373,995 - -0.0
1,374,043 + B158DRAFT_1332 0.23 +1.4
1,374,057 - B158DRAFT_1332 0.27 +1.0
1,374,079 + B158DRAFT_1332 0.33 +1.8
1,374,088 - B158DRAFT_1332 0.35 -1.7
1,374,088 - B158DRAFT_1332 0.35 -0.2
1,374,132 - B158DRAFT_1332 0.47 -2.6
1,374,313 + -1.5
1,374,313 + +0.6
1,374,321 - -1.1
1,374,321 - -0.2
1,374,416 + -0.9
1,374,429 + +0.2
1,374,438 - -1.7
1,374,438 - +1.4
1,374,459 - -1.6
1,374,461 + -0.3
1,374,469 - -0.6
1,374,469 - -0.3
1,374,548 + B158DRAFT_1333 0.18 -0.6
1,374,556 - B158DRAFT_1333 0.19 -0.9
1,374,556 - B158DRAFT_1333 0.19 -0.2
1,374,556 - B158DRAFT_1333 0.19 -2.1
1,374,556 - B158DRAFT_1333 0.19 +0.0
1,374,591 + B158DRAFT_1333 0.23 -0.1
1,374,593 + B158DRAFT_1333 0.23 -0.3
1,374,601 - B158DRAFT_1333 0.24 -2.5
1,374,601 - B158DRAFT_1333 0.24 -2.1
1,374,607 - B158DRAFT_1333 0.25 +0.2
1,374,618 + B158DRAFT_1333 0.26 +0.5
1,374,626 - B158DRAFT_1333 0.27 +0.3
1,374,626 - B158DRAFT_1333 0.27 +0.1
1,374,626 - B158DRAFT_1333 0.27 +0.3
1,374,626 - B158DRAFT_1333 0.27 -1.2
1,374,675 - B158DRAFT_1333 0.33 -1.4
1,374,677 + B158DRAFT_1333 0.33 +0.2
1,374,685 - B158DRAFT_1333 0.34 +0.0
1,374,685 - B158DRAFT_1333 0.34 +0.6
1,374,685 - B158DRAFT_1333 0.34 +1.3
1,374,687 - B158DRAFT_1333 0.34 -1.0
1,374,729 - B158DRAFT_1333 0.39 +1.2
1,374,802 - B158DRAFT_1333 0.48 -0.4
1,374,843 + B158DRAFT_1333 0.52 +3.2
1,374,851 - B158DRAFT_1333 0.53 +1.0
1,374,864 + B158DRAFT_1333 0.55 -0.1
1,374,864 + B158DRAFT_1333 0.55 -0.8
1,374,936 - B158DRAFT_1333 0.63 +0.5
1,374,956 + B158DRAFT_1333 0.66 +1.3
1,374,956 + B158DRAFT_1333 0.66 -0.7
1,374,956 + B158DRAFT_1333 0.66 +0.5
1,374,956 + B158DRAFT_1333 0.66 -0.1
1,374,956 + B158DRAFT_1333 0.66 +1.5
1,374,956 + B158DRAFT_1333 0.66 +0.3
1,374,964 - B158DRAFT_1333 0.67 -0.1
1,374,964 - B158DRAFT_1333 0.67 -1.4
1,374,964 - B158DRAFT_1333 0.67 +0.4
1,375,035 + B158DRAFT_1333 0.75 +1.4
1,375,035 + B158DRAFT_1333 0.75 +0.9
1,375,043 + B158DRAFT_1333 0.76 +0.1
1,375,043 - B158DRAFT_1333 0.76 +0.2
1,375,051 - B158DRAFT_1333 0.77 -1.1
1,375,051 - B158DRAFT_1333 0.77 -1.4
1,375,051 - B158DRAFT_1333 0.77 -0.1
1,375,071 - B158DRAFT_1333 0.79 +0.6
1,375,075 + B158DRAFT_1333 0.80 -0.0
1,375,083 + B158DRAFT_1333 0.81 -1.3
1,375,083 - B158DRAFT_1333 0.81 +0.8
1,375,124 + B158DRAFT_1333 0.86 +1.1
1,375,124 + B158DRAFT_1333 0.86 +1.9
1,375,183 + +1.1
1,375,193 + +0.6
1,375,193 + +0.9
1,375,201 - +0.1
1,375,201 - -0.3
1,375,201 - -0.3
1,375,201 - +2.1
1,375,239 + +0.4
1,375,239 + -1.4
1,375,247 - +0.6
1,375,247 - +1.2
1,375,255 - -0.9
1,375,556 + B158DRAFT_1334 0.38 +0.4
1,375,566 + B158DRAFT_1334 0.40 -1.5
1,375,620 - B158DRAFT_1334 0.47 -0.7
1,375,620 - B158DRAFT_1334 0.47 +0.2
1,375,620 - B158DRAFT_1334 0.47 +0.6
1,375,686 + B158DRAFT_1334 0.55 +1.1
1,375,885 + B158DRAFT_1334 0.80 -0.8
1,376,003 + -1.9
1,376,035 - -0.5
1,376,048 - -0.4
1,376,126 - +2.2
1,376,161 + -2.3
1,376,169 - -2.0
1,376,195 + +0.6
1,376,221 + B158DRAFT_1335 0.13 -1.1
1,376,242 - B158DRAFT_1335 0.16 -0.4

Or see this region's nucleotide sequence