Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1331 and B158DRAFT_1332 are separated by 160 nucleotides B158DRAFT_1332 and B158DRAFT_1333 are separated by 74 nucleotides B158DRAFT_1333 and B158DRAFT_1334 are separated by 9 nucleotides B158DRAFT_1334 and B158DRAFT_1335 are separated by 88 nucleotides
B158DRAFT_1331: B158DRAFT_1331 - Cytochrome c biogenesis factor, at 1,372,773 to 1,373,798
_1331
B158DRAFT_1332: B158DRAFT_1332 - Uncharacterized low-complexity protein, at 1,373,959 to 1,374,324
_1332
B158DRAFT_1333: B158DRAFT_1333 - component of chlorite stress sensing system with B158DRAFT_1334 (DUF2063) (from data) , at 1,374,399 to 1,375,244
_1333
B158DRAFT_1334: B158DRAFT_1334 - component of chlorite stress sensing system with PGA1_c21010 (DUF692) (from data) , at 1,375,254 to 1,376,039
_1334
B158DRAFT_1335: B158DRAFT_1335 - Surface lipoprotein, at 1,376,128 to 1,376,856
_1335
Position (kb)
1374
1375
1376 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.437 kb on - strand, within B158DRAFT_1331 at 1373.520 kb on + strand, within B158DRAFT_1331 at 1373.537 kb on + strand, within B158DRAFT_1331 at 1373.542 kb on + strand, within B158DRAFT_1331 at 1373.552 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.588 kb on + strand, within B158DRAFT_1331 at 1373.596 kb on - strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.622 kb on - strand, within B158DRAFT_1331 at 1373.634 kb on + strand, within B158DRAFT_1331 at 1373.675 kb on - strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.702 kb on + strand at 1373.715 kb on - strand at 1373.755 kb on - strand at 1373.814 kb on + strand at 1373.995 kb on - strand at 1374.043 kb on + strand, within B158DRAFT_1332 at 1374.057 kb on - strand, within B158DRAFT_1332 at 1374.079 kb on + strand, within B158DRAFT_1332 at 1374.088 kb on - strand, within B158DRAFT_1332 at 1374.088 kb on - strand, within B158DRAFT_1332 at 1374.132 kb on - strand, within B158DRAFT_1332 at 1374.313 kb on + strand at 1374.313 kb on + strand at 1374.321 kb on - strand at 1374.321 kb on - strand at 1374.416 kb on + strand at 1374.429 kb on + strand at 1374.438 kb on - strand at 1374.438 kb on - strand at 1374.459 kb on - strand at 1374.461 kb on + strand at 1374.469 kb on - strand at 1374.469 kb on - strand at 1374.548 kb on + strand, within B158DRAFT_1333 at 1374.556 kb on - strand, within B158DRAFT_1333 at 1374.556 kb on - strand, within B158DRAFT_1333 at 1374.556 kb on - strand, within B158DRAFT_1333 at 1374.556 kb on - strand, within B158DRAFT_1333 at 1374.591 kb on + strand, within B158DRAFT_1333 at 1374.593 kb on + strand, within B158DRAFT_1333 at 1374.601 kb on - strand, within B158DRAFT_1333 at 1374.601 kb on - strand, within B158DRAFT_1333 at 1374.607 kb on - strand, within B158DRAFT_1333 at 1374.618 kb on + strand, within B158DRAFT_1333 at 1374.626 kb on - strand, within B158DRAFT_1333 at 1374.626 kb on - strand, within B158DRAFT_1333 at 1374.626 kb on - strand, within B158DRAFT_1333 at 1374.626 kb on - strand, within B158DRAFT_1333 at 1374.675 kb on - strand, within B158DRAFT_1333 at 1374.677 kb on + strand, within B158DRAFT_1333 at 1374.685 kb on - strand, within B158DRAFT_1333 at 1374.685 kb on - strand, within B158DRAFT_1333 at 1374.685 kb on - strand, within B158DRAFT_1333 at 1374.687 kb on - strand, within B158DRAFT_1333 at 1374.729 kb on - strand, within B158DRAFT_1333 at 1374.802 kb on - strand, within B158DRAFT_1333 at 1374.843 kb on + strand, within B158DRAFT_1333 at 1374.851 kb on - strand, within B158DRAFT_1333 at 1374.864 kb on + strand, within B158DRAFT_1333 at 1374.864 kb on + strand, within B158DRAFT_1333 at 1374.936 kb on - strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.956 kb on + strand, within B158DRAFT_1333 at 1374.964 kb on - strand, within B158DRAFT_1333 at 1374.964 kb on - strand, within B158DRAFT_1333 at 1374.964 kb on - strand, within B158DRAFT_1333 at 1375.035 kb on + strand, within B158DRAFT_1333 at 1375.035 kb on + strand, within B158DRAFT_1333 at 1375.043 kb on + strand, within B158DRAFT_1333 at 1375.043 kb on - strand, within B158DRAFT_1333 at 1375.051 kb on - strand, within B158DRAFT_1333 at 1375.051 kb on - strand, within B158DRAFT_1333 at 1375.051 kb on - strand, within B158DRAFT_1333 at 1375.071 kb on - strand, within B158DRAFT_1333 at 1375.075 kb on + strand, within B158DRAFT_1333 at 1375.083 kb on + strand, within B158DRAFT_1333 at 1375.083 kb on - strand, within B158DRAFT_1333 at 1375.124 kb on + strand, within B158DRAFT_1333 at 1375.124 kb on + strand, within B158DRAFT_1333 at 1375.183 kb on + strand at 1375.193 kb on + strand at 1375.193 kb on + strand at 1375.201 kb on - strand at 1375.201 kb on - strand at 1375.201 kb on - strand at 1375.201 kb on - strand at 1375.239 kb on + strand at 1375.239 kb on + strand at 1375.247 kb on - strand at 1375.247 kb on - strand at 1375.255 kb on - strand at 1375.556 kb on + strand, within B158DRAFT_1334 at 1375.566 kb on + strand, within B158DRAFT_1334 at 1375.620 kb on - strand, within B158DRAFT_1334 at 1375.620 kb on - strand, within B158DRAFT_1334 at 1375.620 kb on - strand, within B158DRAFT_1334 at 1375.686 kb on + strand, within B158DRAFT_1334 at 1375.885 kb on + strand, within B158DRAFT_1334 at 1376.003 kb on + strand at 1376.035 kb on - strand at 1376.048 kb on - strand at 1376.126 kb on - strand at 1376.161 kb on + strand at 1376.169 kb on - strand at 1376.195 kb on + strand at 1376.221 kb on + strand, within B158DRAFT_1335 at 1376.242 kb on - strand, within B158DRAFT_1335
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,373,405 + B158DRAFT_1331 0.62 -1.1 1,373,405 + B158DRAFT_1331 0.62 -1.1 1,373,405 + B158DRAFT_1331 0.62 -0.7 1,373,405 + B158DRAFT_1331 0.62 -1.5 1,373,413 - B158DRAFT_1331 0.62 -0.4 1,373,413 - B158DRAFT_1331 0.62 -1.4 1,373,413 - B158DRAFT_1331 0.62 -2.6 1,373,413 - B158DRAFT_1331 0.62 -0.3 1,373,413 - B158DRAFT_1331 0.62 -3.6 1,373,437 - B158DRAFT_1331 0.65 -1.8 1,373,520 + B158DRAFT_1331 0.73 +0.2 1,373,537 + B158DRAFT_1331 0.74 -0.8 1,373,542 + B158DRAFT_1331 0.75 -1.6 1,373,552 + B158DRAFT_1331 0.76 +2.0 1,373,572 + B158DRAFT_1331 0.78 -2.4 1,373,572 + B158DRAFT_1331 0.78 -1.9 1,373,588 + B158DRAFT_1331 0.79 -0.0 1,373,596 - B158DRAFT_1331 0.80 -1.1 1,373,611 + B158DRAFT_1331 0.82 -1.3 1,373,611 + B158DRAFT_1331 0.82 -2.2 1,373,611 + B158DRAFT_1331 0.82 -1.6 1,373,622 - B158DRAFT_1331 0.83 +0.2 1,373,634 + B158DRAFT_1331 0.84 -1.9 1,373,675 - B158DRAFT_1331 0.88 -1.5 1,373,692 + B158DRAFT_1331 0.90 -1.4 1,373,692 + B158DRAFT_1331 0.90 -1.9 1,373,692 + B158DRAFT_1331 0.90 -1.6 1,373,692 + B158DRAFT_1331 0.90 -2.7 1,373,700 - -0.0 1,373,700 - -2.6 1,373,700 - +0.1 1,373,700 - -0.6 1,373,702 + -1.9 1,373,715 - -3.2 1,373,755 - -2.8 1,373,814 + -0.2 1,373,995 - -0.0 1,374,043 + B158DRAFT_1332 0.23 +1.4 1,374,057 - B158DRAFT_1332 0.27 +1.0 1,374,079 + B158DRAFT_1332 0.33 +1.8 1,374,088 - B158DRAFT_1332 0.35 -1.7 1,374,088 - B158DRAFT_1332 0.35 -0.2 1,374,132 - B158DRAFT_1332 0.47 -2.6 1,374,313 + -1.5 1,374,313 + +0.6 1,374,321 - -1.1 1,374,321 - -0.2 1,374,416 + -0.9 1,374,429 + +0.2 1,374,438 - -1.7 1,374,438 - +1.4 1,374,459 - -1.6 1,374,461 + -0.3 1,374,469 - -0.6 1,374,469 - -0.3 1,374,548 + B158DRAFT_1333 0.18 -0.6 1,374,556 - B158DRAFT_1333 0.19 -0.9 1,374,556 - B158DRAFT_1333 0.19 -0.2 1,374,556 - B158DRAFT_1333 0.19 -2.1 1,374,556 - B158DRAFT_1333 0.19 +0.0 1,374,591 + B158DRAFT_1333 0.23 -0.1 1,374,593 + B158DRAFT_1333 0.23 -0.3 1,374,601 - B158DRAFT_1333 0.24 -2.5 1,374,601 - B158DRAFT_1333 0.24 -2.1 1,374,607 - B158DRAFT_1333 0.25 +0.2 1,374,618 + B158DRAFT_1333 0.26 +0.5 1,374,626 - B158DRAFT_1333 0.27 +0.3 1,374,626 - B158DRAFT_1333 0.27 +0.1 1,374,626 - B158DRAFT_1333 0.27 +0.3 1,374,626 - B158DRAFT_1333 0.27 -1.2 1,374,675 - B158DRAFT_1333 0.33 -1.4 1,374,677 + B158DRAFT_1333 0.33 +0.2 1,374,685 - B158DRAFT_1333 0.34 +0.0 1,374,685 - B158DRAFT_1333 0.34 +0.6 1,374,685 - B158DRAFT_1333 0.34 +1.3 1,374,687 - B158DRAFT_1333 0.34 -1.0 1,374,729 - B158DRAFT_1333 0.39 +1.2 1,374,802 - B158DRAFT_1333 0.48 -0.4 1,374,843 + B158DRAFT_1333 0.52 +3.2 1,374,851 - B158DRAFT_1333 0.53 +1.0 1,374,864 + B158DRAFT_1333 0.55 -0.1 1,374,864 + B158DRAFT_1333 0.55 -0.8 1,374,936 - B158DRAFT_1333 0.63 +0.5 1,374,956 + B158DRAFT_1333 0.66 +1.3 1,374,956 + B158DRAFT_1333 0.66 -0.7 1,374,956 + B158DRAFT_1333 0.66 +0.5 1,374,956 + B158DRAFT_1333 0.66 -0.1 1,374,956 + B158DRAFT_1333 0.66 +1.5 1,374,956 + B158DRAFT_1333 0.66 +0.3 1,374,964 - B158DRAFT_1333 0.67 -0.1 1,374,964 - B158DRAFT_1333 0.67 -1.4 1,374,964 - B158DRAFT_1333 0.67 +0.4 1,375,035 + B158DRAFT_1333 0.75 +1.4 1,375,035 + B158DRAFT_1333 0.75 +0.9 1,375,043 + B158DRAFT_1333 0.76 +0.1 1,375,043 - B158DRAFT_1333 0.76 +0.2 1,375,051 - B158DRAFT_1333 0.77 -1.1 1,375,051 - B158DRAFT_1333 0.77 -1.4 1,375,051 - B158DRAFT_1333 0.77 -0.1 1,375,071 - B158DRAFT_1333 0.79 +0.6 1,375,075 + B158DRAFT_1333 0.80 -0.0 1,375,083 + B158DRAFT_1333 0.81 -1.3 1,375,083 - B158DRAFT_1333 0.81 +0.8 1,375,124 + B158DRAFT_1333 0.86 +1.1 1,375,124 + B158DRAFT_1333 0.86 +1.9 1,375,183 + +1.1 1,375,193 + +0.6 1,375,193 + +0.9 1,375,201 - +0.1 1,375,201 - -0.3 1,375,201 - -0.3 1,375,201 - +2.1 1,375,239 + +0.4 1,375,239 + -1.4 1,375,247 - +0.6 1,375,247 - +1.2 1,375,255 - -0.9 1,375,556 + B158DRAFT_1334 0.38 +0.4 1,375,566 + B158DRAFT_1334 0.40 -1.5 1,375,620 - B158DRAFT_1334 0.47 -0.7 1,375,620 - B158DRAFT_1334 0.47 +0.2 1,375,620 - B158DRAFT_1334 0.47 +0.6 1,375,686 + B158DRAFT_1334 0.55 +1.1 1,375,885 + B158DRAFT_1334 0.80 -0.8 1,376,003 + -1.9 1,376,035 - -0.5 1,376,048 - -0.4 1,376,126 - +2.2 1,376,161 + -2.3 1,376,169 - -2.0 1,376,195 + +0.6 1,376,221 + B158DRAFT_1335 0.13 -1.1 1,376,242 - B158DRAFT_1335 0.16 -0.4
Or see this region's nucleotide sequence