Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0995 and B158DRAFT_0996 are separated by 74 nucleotides B158DRAFT_0996 and B158DRAFT_0997 are separated by 32 nucleotides
B158DRAFT_0995: B158DRAFT_0995 - adhesin-associated sorting protein (DUF1329) (from data) , at 1,029,175 to 1,030,557
_0995
B158DRAFT_0996: B158DRAFT_0996 - adhesin-associated BNR repeat protein (from data) , at 1,030,632 to 1,031,639
_0996
B158DRAFT_0997: B158DRAFT_0997 - adhesin-associated MmpL efflux pump (from data) , at 1,031,672 to 1,034,020
_0997
Position (kb)
1030
1031
1032 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1029.701 kb on + strand, within B158DRAFT_0995 at 1029.741 kb on + strand, within B158DRAFT_0995 at 1029.749 kb on - strand, within B158DRAFT_0995 at 1029.749 kb on - strand, within B158DRAFT_0995 at 1029.749 kb on - strand, within B158DRAFT_0995 at 1029.786 kb on + strand, within B158DRAFT_0995 at 1029.794 kb on - strand, within B158DRAFT_0995 at 1029.823 kb on + strand, within B158DRAFT_0995 at 1029.859 kb on - strand, within B158DRAFT_0995 at 1029.869 kb on - strand, within B158DRAFT_0995 at 1029.938 kb on + strand, within B158DRAFT_0995 at 1029.946 kb on - strand, within B158DRAFT_0995 at 1029.971 kb on + strand, within B158DRAFT_0995 at 1029.976 kb on + strand, within B158DRAFT_0995 at 1029.976 kb on + strand, within B158DRAFT_0995 at 1029.976 kb on + strand, within B158DRAFT_0995 at 1029.976 kb on + strand, within B158DRAFT_0995 at 1029.976 kb on + strand, within B158DRAFT_0995 at 1029.984 kb on - strand, within B158DRAFT_0995 at 1029.984 kb on - strand, within B158DRAFT_0995 at 1029.984 kb on - strand, within B158DRAFT_0995 at 1029.984 kb on - strand, within B158DRAFT_0995 at 1029.985 kb on + strand, within B158DRAFT_0995 at 1029.985 kb on + strand, within B158DRAFT_0995 at 1030.002 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.068 kb on + strand, within B158DRAFT_0995 at 1030.076 kb on - strand, within B158DRAFT_0995 at 1030.076 kb on - strand, within B158DRAFT_0995 at 1030.076 kb on - strand, within B158DRAFT_0995 at 1030.076 kb on - strand, within B158DRAFT_0995 at 1030.076 kb on - strand, within B158DRAFT_0995 at 1030.139 kb on + strand, within B158DRAFT_0995 at 1030.194 kb on + strand, within B158DRAFT_0995 at 1030.199 kb on + strand, within B158DRAFT_0995 at 1030.204 kb on + strand, within B158DRAFT_0995 at 1030.237 kb on - strand, within B158DRAFT_0995 at 1030.298 kb on - strand, within B158DRAFT_0995 at 1030.300 kb on + strand, within B158DRAFT_0995 at 1030.308 kb on - strand, within B158DRAFT_0995 at 1030.351 kb on + strand, within B158DRAFT_0995 at 1030.353 kb on + strand, within B158DRAFT_0995 at 1030.359 kb on + strand, within B158DRAFT_0995 at 1030.359 kb on - strand, within B158DRAFT_0995 at 1030.359 kb on - strand, within B158DRAFT_0995 at 1030.359 kb on - strand, within B158DRAFT_0995 at 1030.361 kb on - strand, within B158DRAFT_0995 at 1030.371 kb on + strand, within B158DRAFT_0995 at 1030.445 kb on - strand at 1030.531 kb on + strand at 1030.531 kb on + strand at 1030.539 kb on - strand at 1030.539 kb on - strand at 1030.539 kb on - strand at 1030.539 kb on - strand at 1030.539 kb on - strand at 1030.539 kb on - strand at 1030.546 kb on + strand at 1030.554 kb on - strand at 1030.554 kb on - strand at 1030.609 kb on - strand at 1030.620 kb on + strand at 1030.628 kb on - strand at 1030.633 kb on - strand at 1030.716 kb on + strand at 1030.801 kb on - strand, within B158DRAFT_0996 at 1030.807 kb on + strand, within B158DRAFT_0996 at 1030.832 kb on - strand, within B158DRAFT_0996 at 1030.847 kb on + strand, within B158DRAFT_0996 at 1030.932 kb on + strand, within B158DRAFT_0996 at 1031.066 kb on - strand, within B158DRAFT_0996 at 1031.098 kb on - strand, within B158DRAFT_0996 at 1031.098 kb on - strand, within B158DRAFT_0996 at 1031.100 kb on + strand, within B158DRAFT_0996 at 1031.109 kb on - strand, within B158DRAFT_0996 at 1031.155 kb on - strand, within B158DRAFT_0996 at 1031.155 kb on - strand, within B158DRAFT_0996 at 1031.155 kb on - strand, within B158DRAFT_0996 at 1031.212 kb on + strand, within B158DRAFT_0996 at 1031.271 kb on + strand, within B158DRAFT_0996 at 1031.554 kb on + strand at 1031.654 kb on + strand at 1031.733 kb on + strand at 1031.842 kb on + strand at 1031.883 kb on - strand at 1032.006 kb on - strand, within B158DRAFT_0997 at 1032.030 kb on + strand, within B158DRAFT_0997 at 1032.035 kb on - strand, within B158DRAFT_0997 at 1032.133 kb on + strand, within B158DRAFT_0997 at 1032.303 kb on - strand, within B158DRAFT_0997 at 1032.325 kb on - strand, within B158DRAFT_0997 at 1032.342 kb on + strand, within B158DRAFT_0997 at 1032.418 kb on + strand, within B158DRAFT_0997 at 1032.423 kb on + strand, within B158DRAFT_0997 at 1032.423 kb on + strand, within B158DRAFT_0997 at 1032.431 kb on - strand, within B158DRAFT_0997 at 1032.431 kb on - strand, within B158DRAFT_0997 at 1032.431 kb on - strand, within B158DRAFT_0997 at 1032.456 kb on + strand, within B158DRAFT_0997 at 1032.456 kb on + strand, within B158DRAFT_0997 at 1032.528 kb on + strand, within B158DRAFT_0997 at 1032.535 kb on - strand, within B158DRAFT_0997 at 1032.594 kb on + strand, within B158DRAFT_0997 at 1032.594 kb on + strand, within B158DRAFT_0997 at 1032.602 kb on - strand, within B158DRAFT_0997 at 1032.610 kb on + strand, within B158DRAFT_0997 at 1032.610 kb on + strand, within B158DRAFT_0997 at 1032.625 kb on + strand, within B158DRAFT_0997 at 1032.628 kb on - strand, within B158DRAFT_0997 at 1032.628 kb on - strand, within B158DRAFT_0997 at 1032.628 kb on - strand, within B158DRAFT_0997 at 1032.630 kb on + strand, within B158DRAFT_0997 at 1032.638 kb on - strand, within B158DRAFT_0997
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,029,701 + B158DRAFT_0995 0.38 -0.5 1,029,741 + B158DRAFT_0995 0.41 -1.2 1,029,749 - B158DRAFT_0995 0.42 +0.1 1,029,749 - B158DRAFT_0995 0.42 -2.0 1,029,749 - B158DRAFT_0995 0.42 -2.5 1,029,786 + B158DRAFT_0995 0.44 -1.0 1,029,794 - B158DRAFT_0995 0.45 -0.3 1,029,823 + B158DRAFT_0995 0.47 -2.4 1,029,859 - B158DRAFT_0995 0.49 -0.6 1,029,869 - B158DRAFT_0995 0.50 -0.8 1,029,938 + B158DRAFT_0995 0.55 -1.2 1,029,946 - B158DRAFT_0995 0.56 +1.8 1,029,971 + B158DRAFT_0995 0.58 -0.6 1,029,976 + B158DRAFT_0995 0.58 -0.5 1,029,976 + B158DRAFT_0995 0.58 -0.8 1,029,976 + B158DRAFT_0995 0.58 -0.9 1,029,976 + B158DRAFT_0995 0.58 -0.3 1,029,976 + B158DRAFT_0995 0.58 -0.6 1,029,984 - B158DRAFT_0995 0.58 -2.3 1,029,984 - B158DRAFT_0995 0.58 +1.1 1,029,984 - B158DRAFT_0995 0.58 +0.2 1,029,984 - B158DRAFT_0995 0.58 -0.9 1,029,985 + B158DRAFT_0995 0.59 -0.2 1,029,985 + B158DRAFT_0995 0.59 -2.1 1,030,002 + B158DRAFT_0995 0.60 +0.6 1,030,068 + B158DRAFT_0995 0.65 +0.3 1,030,068 + B158DRAFT_0995 0.65 +0.3 1,030,068 + B158DRAFT_0995 0.65 -0.3 1,030,068 + B158DRAFT_0995 0.65 +0.5 1,030,068 + B158DRAFT_0995 0.65 -1.2 1,030,068 + B158DRAFT_0995 0.65 -1.6 1,030,068 + B158DRAFT_0995 0.65 -0.4 1,030,068 + B158DRAFT_0995 0.65 -1.2 1,030,068 + B158DRAFT_0995 0.65 -0.7 1,030,068 + B158DRAFT_0995 0.65 -0.4 1,030,068 + B158DRAFT_0995 0.65 -0.4 1,030,076 - B158DRAFT_0995 0.65 -0.7 1,030,076 - B158DRAFT_0995 0.65 -1.9 1,030,076 - B158DRAFT_0995 0.65 -0.1 1,030,076 - B158DRAFT_0995 0.65 -0.8 1,030,076 - B158DRAFT_0995 0.65 +0.4 1,030,139 + B158DRAFT_0995 0.70 -1.1 1,030,194 + B158DRAFT_0995 0.74 +2.3 1,030,199 + B158DRAFT_0995 0.74 -0.5 1,030,204 + B158DRAFT_0995 0.74 -1.4 1,030,237 - B158DRAFT_0995 0.77 -0.1 1,030,298 - B158DRAFT_0995 0.81 -0.3 1,030,300 + B158DRAFT_0995 0.81 -1.1 1,030,308 - B158DRAFT_0995 0.82 +0.4 1,030,351 + B158DRAFT_0995 0.85 -0.6 1,030,353 + B158DRAFT_0995 0.85 -1.3 1,030,359 + B158DRAFT_0995 0.86 -1.0 1,030,359 - B158DRAFT_0995 0.86 -0.3 1,030,359 - B158DRAFT_0995 0.86 +0.1 1,030,359 - B158DRAFT_0995 0.86 +0.7 1,030,361 - B158DRAFT_0995 0.86 -1.9 1,030,371 + B158DRAFT_0995 0.86 +0.3 1,030,445 - +0.1 1,030,531 + +0.8 1,030,531 + -0.1 1,030,539 - -0.5 1,030,539 - +0.0 1,030,539 - -0.2 1,030,539 - -0.7 1,030,539 - +0.2 1,030,539 - +4.8 1,030,546 + -0.3 1,030,554 - -2.2 1,030,554 - -1.7 1,030,609 - -1.0 1,030,620 + -1.2 1,030,628 - -0.8 1,030,633 - -0.8 1,030,716 + -0.6 1,030,801 - B158DRAFT_0996 0.17 -0.1 1,030,807 + B158DRAFT_0996 0.17 -0.4 1,030,832 - B158DRAFT_0996 0.20 -1.4 1,030,847 + B158DRAFT_0996 0.21 +1.8 1,030,932 + B158DRAFT_0996 0.30 -1.4 1,031,066 - B158DRAFT_0996 0.43 -0.7 1,031,098 - B158DRAFT_0996 0.46 -1.7 1,031,098 - B158DRAFT_0996 0.46 -0.6 1,031,100 + B158DRAFT_0996 0.46 +1.2 1,031,109 - B158DRAFT_0996 0.47 -0.5 1,031,155 - B158DRAFT_0996 0.52 +0.0 1,031,155 - B158DRAFT_0996 0.52 -0.7 1,031,155 - B158DRAFT_0996 0.52 +0.6 1,031,212 + B158DRAFT_0996 0.58 -1.2 1,031,271 + B158DRAFT_0996 0.63 -1.2 1,031,554 + -0.6 1,031,654 + -0.0 1,031,733 + -0.4 1,031,842 + -0.5 1,031,883 - -0.0 1,032,006 - B158DRAFT_0997 0.14 -0.4 1,032,030 + B158DRAFT_0997 0.15 +0.4 1,032,035 - B158DRAFT_0997 0.15 -3.5 1,032,133 + B158DRAFT_0997 0.20 -1.2 1,032,303 - B158DRAFT_0997 0.27 +0.2 1,032,325 - B158DRAFT_0997 0.28 -1.2 1,032,342 + B158DRAFT_0997 0.29 -1.9 1,032,418 + B158DRAFT_0997 0.32 -1.1 1,032,423 + B158DRAFT_0997 0.32 -0.3 1,032,423 + B158DRAFT_0997 0.32 -2.0 1,032,431 - B158DRAFT_0997 0.32 -0.3 1,032,431 - B158DRAFT_0997 0.32 +0.3 1,032,431 - B158DRAFT_0997 0.32 +0.5 1,032,456 + B158DRAFT_0997 0.33 -0.0 1,032,456 + B158DRAFT_0997 0.33 -1.3 1,032,528 + B158DRAFT_0997 0.36 +1.0 1,032,535 - B158DRAFT_0997 0.37 -1.9 1,032,594 + B158DRAFT_0997 0.39 -1.9 1,032,594 + B158DRAFT_0997 0.39 -1.2 1,032,602 - B158DRAFT_0997 0.40 +1.2 1,032,610 + B158DRAFT_0997 0.40 -1.3 1,032,610 + B158DRAFT_0997 0.40 +0.1 1,032,625 + B158DRAFT_0997 0.41 -0.3 1,032,628 - B158DRAFT_0997 0.41 +0.1 1,032,628 - B158DRAFT_0997 0.41 -0.6 1,032,628 - B158DRAFT_0997 0.41 -0.3 1,032,630 + B158DRAFT_0997 0.41 -2.1 1,032,638 - B158DRAFT_0997 0.41 -0.6
Or see this region's nucleotide sequence