Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0922

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0920 and B158DRAFT_0921 are separated by 44 nucleotidesB158DRAFT_0921 and B158DRAFT_0922 are separated by 82 nucleotidesB158DRAFT_0922 and B158DRAFT_0923 are separated by 175 nucleotides B158DRAFT_0920: B158DRAFT_0920 - Major Facilitator Superfamily., at 947,114 to 948,493 _0920 B158DRAFT_0921: B158DRAFT_0921 - hypothetical protein, at 948,538 to 949,296 _0921 B158DRAFT_0922: B158DRAFT_0922 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1, at 949,379 to 950,215 _0922 B158DRAFT_0923: B158DRAFT_0923 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 950,391 to 952,358 _0923 Position (kb) 949 950 951Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 948.436 kb on - strandat 948.436 kb on - strandat 948.654 kb on - strand, within B158DRAFT_0921at 948.738 kb on + strand, within B158DRAFT_0921at 948.741 kb on - strand, within B158DRAFT_0921at 948.746 kb on - strand, within B158DRAFT_0921at 948.768 kb on + strand, within B158DRAFT_0921at 948.784 kb on + strand, within B158DRAFT_0921at 948.784 kb on + strand, within B158DRAFT_0921at 948.792 kb on - strand, within B158DRAFT_0921at 948.827 kb on - strand, within B158DRAFT_0921at 948.835 kb on + strand, within B158DRAFT_0921at 948.840 kb on + strand, within B158DRAFT_0921at 948.840 kb on + strand, within B158DRAFT_0921at 948.855 kb on + strand, within B158DRAFT_0921at 948.897 kb on + strand, within B158DRAFT_0921at 948.905 kb on - strand, within B158DRAFT_0921at 948.954 kb on - strand, within B158DRAFT_0921at 949.004 kb on + strand, within B158DRAFT_0921at 949.012 kb on - strand, within B158DRAFT_0921at 949.012 kb on - strand, within B158DRAFT_0921at 949.012 kb on - strand, within B158DRAFT_0921at 949.030 kb on + strand, within B158DRAFT_0921at 949.030 kb on + strand, within B158DRAFT_0921at 949.032 kb on - strand, within B158DRAFT_0921at 949.032 kb on - strand, within B158DRAFT_0921at 949.098 kb on - strand, within B158DRAFT_0921at 949.177 kb on - strand, within B158DRAFT_0921at 949.177 kb on - strand, within B158DRAFT_0921at 949.248 kb on - strandat 949.268 kb on - strandat 949.271 kb on - strandat 949.333 kb on + strandat 949.362 kb on + strandat 949.362 kb on + strandat 949.370 kb on - strandat 949.370 kb on - strandat 949.370 kb on - strandat 949.393 kb on + strandat 949.393 kb on + strandat 949.436 kb on - strandat 949.540 kb on - strand, within B158DRAFT_0922at 949.618 kb on + strand, within B158DRAFT_0922at 949.656 kb on - strand, within B158DRAFT_0922at 949.679 kb on + strand, within B158DRAFT_0922at 949.680 kb on + strand, within B158DRAFT_0922at 949.710 kb on - strand, within B158DRAFT_0922at 949.778 kb on + strand, within B158DRAFT_0922at 949.824 kb on - strand, within B158DRAFT_0922at 949.824 kb on - strand, within B158DRAFT_0922at 949.824 kb on - strand, within B158DRAFT_0922at 949.901 kb on + strand, within B158DRAFT_0922at 949.901 kb on + strand, within B158DRAFT_0922at 949.919 kb on + strand, within B158DRAFT_0922at 949.927 kb on - strand, within B158DRAFT_0922at 949.936 kb on + strand, within B158DRAFT_0922at 949.951 kb on + strand, within B158DRAFT_0922at 949.959 kb on - strand, within B158DRAFT_0922at 949.979 kb on + strand, within B158DRAFT_0922at 949.987 kb on - strand, within B158DRAFT_0922at 950.012 kb on + strand, within B158DRAFT_0922at 950.025 kb on - strand, within B158DRAFT_0922at 950.033 kb on - strand, within B158DRAFT_0922at 950.033 kb on - strand, within B158DRAFT_0922at 950.033 kb on - strand, within B158DRAFT_0922at 950.080 kb on + strand, within B158DRAFT_0922at 950.080 kb on + strand, within B158DRAFT_0922at 950.088 kb on - strand, within B158DRAFT_0922at 950.088 kb on - strand, within B158DRAFT_0922at 950.088 kb on - strand, within B158DRAFT_0922at 950.088 kb on - strand, within B158DRAFT_0922at 950.088 kb on - strand, within B158DRAFT_0922at 950.102 kb on + strand, within B158DRAFT_0922at 950.136 kb on + strandat 950.141 kb on + strandat 950.141 kb on + strandat 950.446 kb on + strandat 950.553 kb on - strandat 950.585 kb on - strandat 950.635 kb on - strand, within B158DRAFT_0923at 950.645 kb on - strand, within B158DRAFT_0923at 950.784 kb on + strand, within B158DRAFT_0923at 950.854 kb on + strand, within B158DRAFT_0923at 951.082 kb on + strand, within B158DRAFT_0923at 951.087 kb on + strand, within B158DRAFT_0923at 951.100 kb on - strand, within B158DRAFT_0923at 951.137 kb on - strand, within B158DRAFT_0923

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
948,436 - -0.4
948,436 - -0.9
948,654 - B158DRAFT_0921 0.15 +1.1
948,738 + B158DRAFT_0921 0.26 +0.3
948,741 - B158DRAFT_0921 0.27 +0.4
948,746 - B158DRAFT_0921 0.27 +0.2
948,768 + B158DRAFT_0921 0.30 -1.0
948,784 + B158DRAFT_0921 0.32 -0.5
948,784 + B158DRAFT_0921 0.32 -1.2
948,792 - B158DRAFT_0921 0.33 -0.7
948,827 - B158DRAFT_0921 0.38 +0.5
948,835 + B158DRAFT_0921 0.39 -0.3
948,840 + B158DRAFT_0921 0.40 -0.3
948,840 + B158DRAFT_0921 0.40 -2.5
948,855 + B158DRAFT_0921 0.42 +0.1
948,897 + B158DRAFT_0921 0.47 -1.8
948,905 - B158DRAFT_0921 0.48 -0.4
948,954 - B158DRAFT_0921 0.55 +0.7
949,004 + B158DRAFT_0921 0.61 -0.8
949,012 - B158DRAFT_0921 0.62 +0.2
949,012 - B158DRAFT_0921 0.62 -1.1
949,012 - B158DRAFT_0921 0.62 -0.2
949,030 + B158DRAFT_0921 0.65 -0.5
949,030 + B158DRAFT_0921 0.65 -2.3
949,032 - B158DRAFT_0921 0.65 +0.1
949,032 - B158DRAFT_0921 0.65 +1.0
949,098 - B158DRAFT_0921 0.74 +0.3
949,177 - B158DRAFT_0921 0.84 +0.3
949,177 - B158DRAFT_0921 0.84 -0.7
949,248 - +1.3
949,268 - -2.3
949,271 - -0.5
949,333 + -0.5
949,362 + -1.1
949,362 + +0.2
949,370 - +0.2
949,370 - -1.3
949,370 - -0.7
949,393 + +0.8
949,393 + -0.3
949,436 - -0.2
949,540 - B158DRAFT_0922 0.19 -1.1
949,618 + B158DRAFT_0922 0.29 +1.0
949,656 - B158DRAFT_0922 0.33 +0.8
949,679 + B158DRAFT_0922 0.36 -1.0
949,680 + B158DRAFT_0922 0.36 -1.0
949,710 - B158DRAFT_0922 0.40 -2.4
949,778 + B158DRAFT_0922 0.48 -1.2
949,824 - B158DRAFT_0922 0.53 +0.6
949,824 - B158DRAFT_0922 0.53 +1.0
949,824 - B158DRAFT_0922 0.53 -0.4
949,901 + B158DRAFT_0922 0.62 +0.8
949,901 + B158DRAFT_0922 0.62 -1.6
949,919 + B158DRAFT_0922 0.65 +0.3
949,927 - B158DRAFT_0922 0.65 -1.8
949,936 + B158DRAFT_0922 0.67 -0.6
949,951 + B158DRAFT_0922 0.68 +1.2
949,959 - B158DRAFT_0922 0.69 -2.0
949,979 + B158DRAFT_0922 0.72 -0.3
949,987 - B158DRAFT_0922 0.73 +2.5
950,012 + B158DRAFT_0922 0.76 -0.5
950,025 - B158DRAFT_0922 0.77 +1.1
950,033 - B158DRAFT_0922 0.78 -1.8
950,033 - B158DRAFT_0922 0.78 +0.3
950,033 - B158DRAFT_0922 0.78 -0.7
950,080 + B158DRAFT_0922 0.84 -0.7
950,080 + B158DRAFT_0922 0.84 +0.8
950,088 - B158DRAFT_0922 0.85 -0.5
950,088 - B158DRAFT_0922 0.85 -1.0
950,088 - B158DRAFT_0922 0.85 +0.7
950,088 - B158DRAFT_0922 0.85 -1.5
950,088 - B158DRAFT_0922 0.85 +0.6
950,102 + B158DRAFT_0922 0.86 -1.0
950,136 + +0.3
950,141 + -1.5
950,141 + -1.9
950,446 + +3.7
950,553 - +3.4
950,585 - +5.7
950,635 - B158DRAFT_0923 0.12 +3.5
950,645 - B158DRAFT_0923 0.13 +4.5
950,784 + B158DRAFT_0923 0.20 +2.7
950,854 + B158DRAFT_0923 0.24 +3.1
951,082 + B158DRAFT_0923 0.35 +2.9
951,087 + B158DRAFT_0923 0.35 +3.2
951,100 - B158DRAFT_0923 0.36 +1.0
951,137 - B158DRAFT_0923 0.38 +2.8

Or see this region's nucleotide sequence