Experiment: m.b. pH6.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1786 and B158DRAFT_1787 are separated by 455 nucleotides B158DRAFT_1787 and B158DRAFT_1788 are separated by 122 nucleotides B158DRAFT_1788 and B158DRAFT_1789 are separated by 81 nucleotides
B158DRAFT_1786: B158DRAFT_1786 - Outer membrane receptor proteins, mostly Fe transport, at 1,879,688 to 1,881,883
_1786
B158DRAFT_1787: B158DRAFT_1787 - hypothetical protein, at 1,882,339 to 1,883,112
_1787
B158DRAFT_1788: B158DRAFT_1788 - hypothetical protein, at 1,883,235 to 1,883,741
_1788
B158DRAFT_1789: B158DRAFT_1789 - hypothetical protein, at 1,883,823 to 1,884,341
_1789
Position (kb)
1882
1883
1884 Strain fitness (log2 ratio)
-2
-1
0
1 at 1881.344 kb on - strand, within B158DRAFT_1786 at 1881.395 kb on - strand, within B158DRAFT_1786 at 1881.411 kb on + strand, within B158DRAFT_1786 at 1881.423 kb on + strand, within B158DRAFT_1786 at 1881.478 kb on + strand, within B158DRAFT_1786 at 1881.587 kb on - strand, within B158DRAFT_1786 at 1881.587 kb on - strand, within B158DRAFT_1786 at 1881.623 kb on + strand, within B158DRAFT_1786 at 1881.666 kb on + strand at 1881.690 kb on + strand at 1881.698 kb on - strand at 1881.719 kb on + strand at 1881.727 kb on - strand at 1881.727 kb on - strand at 1881.747 kb on + strand at 1881.770 kb on - strand at 1881.778 kb on - strand at 1881.883 kb on + strand at 1881.912 kb on + strand at 1881.966 kb on - strand at 1881.968 kb on + strand at 1881.968 kb on + strand at 1881.976 kb on - strand at 1882.042 kb on - strand at 1882.076 kb on + strand at 1882.114 kb on + strand at 1882.149 kb on + strand at 1882.210 kb on - strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.268 kb on + strand at 1882.302 kb on + strand at 1882.302 kb on + strand at 1882.302 kb on + strand at 1882.308 kb on + strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.323 kb on - strand at 1882.331 kb on + strand at 1882.339 kb on + strand at 1882.348 kb on + strand at 1882.357 kb on - strand at 1882.461 kb on - strand, within B158DRAFT_1787 at 1882.627 kb on - strand, within B158DRAFT_1787 at 1882.656 kb on + strand, within B158DRAFT_1787 at 1882.718 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.762 kb on - strand, within B158DRAFT_1787 at 1882.762 kb on - strand, within B158DRAFT_1787 at 1882.793 kb on + strand, within B158DRAFT_1787 at 1882.891 kb on + strand, within B158DRAFT_1787 at 1882.969 kb on + strand, within B158DRAFT_1787 at 1882.969 kb on + strand, within B158DRAFT_1787 at 1882.977 kb on - strand, within B158DRAFT_1787 at 1883.110 kb on - strand at 1883.119 kb on - strand at 1883.155 kb on - strand at 1883.155 kb on - strand at 1883.241 kb on - strand at 1883.276 kb on + strand at 1883.453 kb on - strand, within B158DRAFT_1788 at 1883.615 kb on + strand, within B158DRAFT_1788 at 1883.755 kb on - strand at 1884.090 kb on - strand, within B158DRAFT_1789
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6.5 remove 1,881,344 - B158DRAFT_1786 0.75 +0.8 1,881,395 - B158DRAFT_1786 0.78 -0.2 1,881,411 + B158DRAFT_1786 0.78 +0.2 1,881,423 + B158DRAFT_1786 0.79 +0.1 1,881,478 + B158DRAFT_1786 0.82 -2.1 1,881,587 - B158DRAFT_1786 0.86 -0.3 1,881,587 - B158DRAFT_1786 0.86 -0.8 1,881,623 + B158DRAFT_1786 0.88 -0.0 1,881,666 + -0.0 1,881,690 + -0.3 1,881,698 - -0.3 1,881,719 + -0.6 1,881,727 - -0.4 1,881,727 - -0.2 1,881,747 + +0.1 1,881,770 - -0.5 1,881,778 - -0.5 1,881,883 + +0.4 1,881,912 + -0.8 1,881,966 - +0.1 1,881,968 + -0.4 1,881,968 + +0.1 1,881,976 - -1.1 1,882,042 - -0.0 1,882,076 + -0.0 1,882,114 + -0.2 1,882,149 + -0.3 1,882,210 - -0.1 1,882,234 + -0.3 1,882,234 + +0.0 1,882,234 + +0.4 1,882,234 + +0.3 1,882,234 + -0.1 1,882,234 + +0.2 1,882,234 + -0.1 1,882,234 + +0.0 1,882,234 + +0.2 1,882,234 + -0.4 1,882,234 + -0.7 1,882,234 + -0.3 1,882,234 + +0.0 1,882,234 + -1.2 1,882,234 + +0.2 1,882,242 - -0.1 1,882,242 - -0.8 1,882,242 - -0.1 1,882,242 - +0.2 1,882,242 - -0.1 1,882,242 - -0.6 1,882,242 - -0.1 1,882,242 - -1.0 1,882,242 - +0.3 1,882,242 - -0.1 1,882,242 - -0.1 1,882,242 - -0.9 1,882,242 - -0.3 1,882,242 - -0.1 1,882,242 - +0.4 1,882,242 - -0.4 1,882,242 - -0.4 1,882,242 - +0.4 1,882,242 - +0.4 1,882,242 - -0.7 1,882,268 + -0.5 1,882,302 + +0.1 1,882,302 + -0.2 1,882,302 + -0.0 1,882,308 + +0.1 1,882,310 - -0.3 1,882,310 - -0.1 1,882,310 - +0.3 1,882,310 - +0.3 1,882,310 - -0.4 1,882,323 - +0.7 1,882,331 + +0.1 1,882,339 + +0.0 1,882,348 + -0.9 1,882,357 - -0.4 1,882,461 - B158DRAFT_1787 0.16 -0.2 1,882,627 - B158DRAFT_1787 0.37 -1.3 1,882,656 + B158DRAFT_1787 0.41 -0.4 1,882,718 + B158DRAFT_1787 0.49 -1.1 1,882,754 + B158DRAFT_1787 0.54 -0.3 1,882,754 + B158DRAFT_1787 0.54 -0.6 1,882,754 + B158DRAFT_1787 0.54 -1.0 1,882,762 - B158DRAFT_1787 0.55 -1.1 1,882,762 - B158DRAFT_1787 0.55 -0.2 1,882,793 + B158DRAFT_1787 0.59 -0.1 1,882,891 + B158DRAFT_1787 0.71 -0.3 1,882,969 + B158DRAFT_1787 0.81 +0.6 1,882,969 + B158DRAFT_1787 0.81 -0.2 1,882,977 - B158DRAFT_1787 0.82 -0.9 1,883,110 - -0.4 1,883,119 - +0.3 1,883,155 - -0.9 1,883,155 - -0.1 1,883,241 - -0.4 1,883,276 + -0.5 1,883,453 - B158DRAFT_1788 0.43 -0.5 1,883,615 + B158DRAFT_1788 0.75 -0.2 1,883,755 - -0.1 1,884,090 - B158DRAFT_1789 0.51 -0.0
Or see this region's nucleotide sequence