Experiment: m.b. pH6.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1263 and B158DRAFT_1264 are separated by 96 nucleotides B158DRAFT_1264 and B158DRAFT_1265 are separated by 141 nucleotides B158DRAFT_1265 and B158DRAFT_1267 are separated by 452 nucleotides B158DRAFT_1267 and B158DRAFT_1268 are separated by 41 nucleotides
B158DRAFT_1263: B158DRAFT_1263 - Predicted transcriptional regulators, at 1,300,826 to 1,301,176
_1263
B158DRAFT_1264: B158DRAFT_1264 - tRNA_Pro_GGG, at 1,301,273 to 1,301,349
_1264
B158DRAFT_1265: B158DRAFT_1265 - tRNA_Ser_TGA, at 1,301,491 to 1,301,581
_1265
B158DRAFT_1267: B158DRAFT_1267 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,302,034 to 1,304,916
_1267
B158DRAFT_1268: B158DRAFT_1268 - Adenine specific DNA methylase Mod, at 1,304,958 to 1,308,023
_1268
Position (kb)
1302
1303
1304
1305 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1301.169 kb on - strand at 1301.179 kb on - strand at 1301.228 kb on + strand at 1301.230 kb on + strand at 1301.240 kb on - strand at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.287 kb on + strand, within B158DRAFT_1264 at 1301.293 kb on - strand, within B158DRAFT_1264 at 1301.300 kb on + strand, within B158DRAFT_1264 at 1301.308 kb on + strand, within B158DRAFT_1264 at 1301.310 kb on + strand, within B158DRAFT_1264 at 1301.316 kb on - strand, within B158DRAFT_1264 at 1301.318 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on + strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.326 kb on - strand, within B158DRAFT_1264 at 1301.335 kb on - strand, within B158DRAFT_1264 at 1301.396 kb on - strand at 1301.401 kb on - strand at 1301.648 kb on + strand at 1301.718 kb on - strand at 1301.741 kb on - strand at 1301.741 kb on - strand at 1301.818 kb on - strand at 1301.894 kb on + strand at 1301.941 kb on + strand at 1301.980 kb on - strand at 1302.039 kb on + strand at 1302.039 kb on + strand at 1302.044 kb on + strand at 1302.044 kb on + strand at 1302.068 kb on - strand at 1302.068 kb on - strand at 1302.103 kb on + strand at 1302.114 kb on + strand at 1302.122 kb on - strand at 1302.159 kb on + strand at 1302.167 kb on - strand at 1302.177 kb on - strand at 1302.177 kb on - strand at 1302.177 kb on - strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.183 kb on + strand at 1302.190 kb on + strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.191 kb on - strand at 1302.202 kb on + strand at 1302.202 kb on + strand at 1302.202 kb on + strand at 1302.210 kb on - strand at 1302.225 kb on - strand at 1302.239 kb on - strand at 1302.250 kb on + strand at 1302.250 kb on + strand at 1302.258 kb on - strand at 1302.258 kb on - strand at 1302.262 kb on + strand at 1302.351 kb on + strand, within B158DRAFT_1267 at 1302.385 kb on + strand, within B158DRAFT_1267 at 1302.412 kb on + strand, within B158DRAFT_1267 at 1302.422 kb on - strand, within B158DRAFT_1267 at 1302.464 kb on + strand, within B158DRAFT_1267 at 1302.485 kb on - strand, within B158DRAFT_1267 at 1302.524 kb on + strand, within B158DRAFT_1267 at 1302.571 kb on + strand, within B158DRAFT_1267 at 1302.622 kb on - strand, within B158DRAFT_1267 at 1302.653 kb on - strand, within B158DRAFT_1267 at 1302.740 kb on + strand, within B158DRAFT_1267 at 1302.740 kb on + strand, within B158DRAFT_1267 at 1302.740 kb on + strand, within B158DRAFT_1267 at 1302.748 kb on - strand, within B158DRAFT_1267 at 1302.748 kb on - strand, within B158DRAFT_1267 at 1302.752 kb on + strand, within B158DRAFT_1267 at 1302.752 kb on + strand, within B158DRAFT_1267 at 1302.760 kb on - strand, within B158DRAFT_1267 at 1302.760 kb on - strand, within B158DRAFT_1267 at 1302.853 kb on - strand, within B158DRAFT_1267 at 1302.853 kb on - strand, within B158DRAFT_1267 at 1302.870 kb on - strand, within B158DRAFT_1267 at 1302.974 kb on + strand, within B158DRAFT_1267 at 1303.021 kb on - strand, within B158DRAFT_1267 at 1303.067 kb on - strand, within B158DRAFT_1267 at 1303.142 kb on - strand, within B158DRAFT_1267 at 1303.213 kb on + strand, within B158DRAFT_1267 at 1303.213 kb on + strand, within B158DRAFT_1267 at 1303.341 kb on + strand, within B158DRAFT_1267 at 1303.341 kb on + strand, within B158DRAFT_1267 at 1303.349 kb on - strand, within B158DRAFT_1267 at 1303.349 kb on - strand, within B158DRAFT_1267 at 1303.499 kb on - strand, within B158DRAFT_1267 at 1303.502 kb on + strand, within B158DRAFT_1267 at 1303.510 kb on - strand, within B158DRAFT_1267 at 1303.584 kb on + strand, within B158DRAFT_1267 at 1303.584 kb on + strand, within B158DRAFT_1267 at 1303.592 kb on - strand, within B158DRAFT_1267 at 1303.710 kb on + strand, within B158DRAFT_1267 at 1303.729 kb on + strand, within B158DRAFT_1267 at 1303.735 kb on - strand, within B158DRAFT_1267 at 1303.737 kb on - strand, within B158DRAFT_1267 at 1303.737 kb on - strand, within B158DRAFT_1267 at 1303.737 kb on - strand, within B158DRAFT_1267 at 1303.804 kb on + strand, within B158DRAFT_1267 at 1303.812 kb on - strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.862 kb on + strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1303.870 kb on - strand, within B158DRAFT_1267 at 1304.143 kb on - strand, within B158DRAFT_1267 at 1304.145 kb on + strand, within B158DRAFT_1267 at 1304.192 kb on - strand, within B158DRAFT_1267 at 1304.208 kb on + strand, within B158DRAFT_1267 at 1304.216 kb on - strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.460 kb on - strand, within B158DRAFT_1267 at 1304.653 kb on + strand at 1304.668 kb on - strand at 1304.758 kb on + strand at 1304.835 kb on + strand at 1304.973 kb on - strand at 1305.078 kb on + strand at 1305.086 kb on - strand at 1305.194 kb on + strand at 1305.202 kb on - strand at 1305.350 kb on + strand, within B158DRAFT_1268 at 1305.468 kb on - strand, within B158DRAFT_1268 at 1305.498 kb on - strand, within B158DRAFT_1268 at 1305.600 kb on + strand, within B158DRAFT_1268 at 1305.643 kb on + strand, within B158DRAFT_1268 at 1305.766 kb on - strand, within B158DRAFT_1268 at 1305.852 kb on + strand, within B158DRAFT_1268
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6.5 remove 1,301,169 - +1.0 1,301,179 - -0.4 1,301,228 + -0.5 1,301,230 + -0.5 1,301,240 - -0.4 1,301,287 + B158DRAFT_1264 0.18 -0.1 1,301,287 + B158DRAFT_1264 0.18 -0.1 1,301,293 - B158DRAFT_1264 0.26 -0.3 1,301,300 + B158DRAFT_1264 0.35 +0.3 1,301,308 + B158DRAFT_1264 0.45 -0.3 1,301,310 + B158DRAFT_1264 0.48 -1.2 1,301,316 - B158DRAFT_1264 0.56 +0.0 1,301,318 + B158DRAFT_1264 0.58 -0.9 1,301,326 + B158DRAFT_1264 0.69 -0.5 1,301,326 - B158DRAFT_1264 0.69 +0.6 1,301,326 - B158DRAFT_1264 0.69 +0.3 1,301,326 - B158DRAFT_1264 0.69 -0.1 1,301,335 - B158DRAFT_1264 0.81 +0.4 1,301,396 - -0.3 1,301,401 - +0.4 1,301,648 + -0.2 1,301,718 - +0.1 1,301,741 - -0.1 1,301,741 - -0.2 1,301,818 - +0.1 1,301,894 + -0.9 1,301,941 + -0.1 1,301,980 - -0.1 1,302,039 + -0.3 1,302,039 + -0.5 1,302,044 + -0.1 1,302,044 + -0.2 1,302,068 - +0.1 1,302,068 - -0.4 1,302,103 + -0.8 1,302,114 + -0.2 1,302,122 - -0.5 1,302,159 + +0.4 1,302,167 - +0.1 1,302,177 - -0.4 1,302,177 - -0.3 1,302,177 - +0.2 1,302,183 + -0.6 1,302,183 + +0.2 1,302,183 + -0.5 1,302,183 + +0.2 1,302,183 + +0.0 1,302,190 + -1.4 1,302,191 - -0.7 1,302,191 - -1.7 1,302,191 - +0.0 1,302,191 - +0.1 1,302,191 - -1.2 1,302,191 - -0.2 1,302,191 - -0.0 1,302,202 + -0.5 1,302,202 + -0.6 1,302,202 + -0.3 1,302,210 - -0.3 1,302,225 - -0.5 1,302,239 - -0.4 1,302,250 + -0.6 1,302,250 + -0.7 1,302,258 - +0.2 1,302,258 - +0.2 1,302,262 + -0.2 1,302,351 + B158DRAFT_1267 0.11 -0.7 1,302,385 + B158DRAFT_1267 0.12 -0.4 1,302,412 + B158DRAFT_1267 0.13 -0.0 1,302,422 - B158DRAFT_1267 0.13 -0.7 1,302,464 + B158DRAFT_1267 0.15 -0.5 1,302,485 - B158DRAFT_1267 0.16 -0.6 1,302,524 + B158DRAFT_1267 0.17 -0.1 1,302,571 + B158DRAFT_1267 0.19 -0.7 1,302,622 - B158DRAFT_1267 0.20 +0.4 1,302,653 - B158DRAFT_1267 0.21 -0.5 1,302,740 + B158DRAFT_1267 0.24 -0.5 1,302,740 + B158DRAFT_1267 0.24 -0.5 1,302,740 + B158DRAFT_1267 0.24 -0.8 1,302,748 - B158DRAFT_1267 0.25 -0.6 1,302,748 - B158DRAFT_1267 0.25 -1.0 1,302,752 + B158DRAFT_1267 0.25 -0.6 1,302,752 + B158DRAFT_1267 0.25 -0.7 1,302,760 - B158DRAFT_1267 0.25 -0.8 1,302,760 - B158DRAFT_1267 0.25 -1.5 1,302,853 - B158DRAFT_1267 0.28 -3.0 1,302,853 - B158DRAFT_1267 0.28 -0.3 1,302,870 - B158DRAFT_1267 0.29 -0.5 1,302,974 + B158DRAFT_1267 0.33 +0.9 1,303,021 - B158DRAFT_1267 0.34 -0.8 1,303,067 - B158DRAFT_1267 0.36 +0.1 1,303,142 - B158DRAFT_1267 0.38 -0.2 1,303,213 + B158DRAFT_1267 0.41 +0.2 1,303,213 + B158DRAFT_1267 0.41 +0.1 1,303,341 + B158DRAFT_1267 0.45 -0.1 1,303,341 + B158DRAFT_1267 0.45 -0.5 1,303,349 - B158DRAFT_1267 0.46 -0.1 1,303,349 - B158DRAFT_1267 0.46 +0.0 1,303,499 - B158DRAFT_1267 0.51 -0.4 1,303,502 + B158DRAFT_1267 0.51 -0.7 1,303,510 - B158DRAFT_1267 0.51 +1.1 1,303,584 + B158DRAFT_1267 0.54 +0.0 1,303,584 + B158DRAFT_1267 0.54 +0.3 1,303,592 - B158DRAFT_1267 0.54 +0.3 1,303,710 + B158DRAFT_1267 0.58 +0.5 1,303,729 + B158DRAFT_1267 0.59 -0.2 1,303,735 - B158DRAFT_1267 0.59 -0.2 1,303,737 - B158DRAFT_1267 0.59 -0.2 1,303,737 - B158DRAFT_1267 0.59 -0.4 1,303,737 - B158DRAFT_1267 0.59 -1.2 1,303,804 + B158DRAFT_1267 0.61 +0.2 1,303,812 - B158DRAFT_1267 0.62 -1.2 1,303,862 + B158DRAFT_1267 0.63 -0.1 1,303,862 + B158DRAFT_1267 0.63 -0.0 1,303,862 + B158DRAFT_1267 0.63 +0.1 1,303,862 + B158DRAFT_1267 0.63 -1.0 1,303,862 + B158DRAFT_1267 0.63 +1.8 1,303,862 + B158DRAFT_1267 0.63 -0.3 1,303,862 + B158DRAFT_1267 0.63 -0.2 1,303,870 - B158DRAFT_1267 0.64 +0.0 1,303,870 - B158DRAFT_1267 0.64 -0.7 1,303,870 - B158DRAFT_1267 0.64 +0.8 1,303,870 - B158DRAFT_1267 0.64 -0.2 1,303,870 - B158DRAFT_1267 0.64 -0.1 1,303,870 - B158DRAFT_1267 0.64 -0.4 1,304,143 - B158DRAFT_1267 0.73 -0.1 1,304,145 + B158DRAFT_1267 0.73 -0.7 1,304,192 - B158DRAFT_1267 0.75 +0.1 1,304,208 + B158DRAFT_1267 0.75 +0.2 1,304,216 - B158DRAFT_1267 0.76 -0.0 1,304,340 + B158DRAFT_1267 0.80 -0.4 1,304,340 + B158DRAFT_1267 0.80 +0.2 1,304,340 + B158DRAFT_1267 0.80 -0.7 1,304,460 - B158DRAFT_1267 0.84 -2.1 1,304,653 + -0.2 1,304,668 - +0.2 1,304,758 + -0.3 1,304,835 + +0.5 1,304,973 - -0.4 1,305,078 + -0.4 1,305,086 - -0.0 1,305,194 + +0.2 1,305,202 - +0.0 1,305,350 + B158DRAFT_1268 0.13 -0.1 1,305,468 - B158DRAFT_1268 0.17 -0.2 1,305,498 - B158DRAFT_1268 0.18 +0.4 1,305,600 + B158DRAFT_1268 0.21 -1.3 1,305,643 + B158DRAFT_1268 0.22 -0.0 1,305,766 - B158DRAFT_1268 0.26 -0.7 1,305,852 + B158DRAFT_1268 0.29 -0.2
Or see this region's nucleotide sequence