Experiment: m.b. pH6.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1200 and B158DRAFT_1201 are separated by 47 nucleotides B158DRAFT_1201 and B158DRAFT_1202 are separated by 10 nucleotides
B158DRAFT_1200: B158DRAFT_1200 - fumarase, class II (EC 4.2.1.2), at 1,238,550 to 1,239,911
_1200
B158DRAFT_1201: B158DRAFT_1201 - Predicted redox protein, regulator of disulfide bond formation, at 1,239,959 to 1,240,411
_1201
B158DRAFT_1202: B158DRAFT_1202 - EamA-like transporter family., at 1,240,422 to 1,241,318
_1202
Position (kb)
1239
1240
1241 Strain fitness (log2 ratio)
-1
0
1 at 1239.015 kb on - strand, within B158DRAFT_1200 at 1239.082 kb on - strand, within B158DRAFT_1200 at 1239.142 kb on + strand, within B158DRAFT_1200 at 1239.212 kb on + strand, within B158DRAFT_1200 at 1239.302 kb on - strand, within B158DRAFT_1200 at 1239.334 kb on + strand, within B158DRAFT_1200 at 1239.352 kb on + strand, within B158DRAFT_1200 at 1239.369 kb on + strand, within B158DRAFT_1200 at 1239.371 kb on + strand, within B158DRAFT_1200 at 1239.432 kb on + strand, within B158DRAFT_1200 at 1239.487 kb on + strand, within B158DRAFT_1200 at 1239.487 kb on + strand, within B158DRAFT_1200 at 1239.526 kb on - strand, within B158DRAFT_1200 at 1239.572 kb on + strand, within B158DRAFT_1200 at 1239.814 kb on + strand at 1239.822 kb on - strand at 1240.175 kb on + strand, within B158DRAFT_1201 at 1240.194 kb on - strand, within B158DRAFT_1201 at 1240.202 kb on - strand, within B158DRAFT_1201 at 1240.244 kb on + strand, within B158DRAFT_1201 at 1240.252 kb on - strand, within B158DRAFT_1201 at 1240.286 kb on + strand, within B158DRAFT_1201 at 1240.293 kb on + strand, within B158DRAFT_1201 at 1240.293 kb on + strand, within B158DRAFT_1201 at 1240.301 kb on - strand, within B158DRAFT_1201 at 1240.301 kb on - strand, within B158DRAFT_1201 at 1240.439 kb on + strand at 1240.467 kb on - strand at 1240.472 kb on - strand at 1240.507 kb on - strand at 1240.565 kb on - strand, within B158DRAFT_1202 at 1240.607 kb on - strand, within B158DRAFT_1202 at 1240.661 kb on - strand, within B158DRAFT_1202 at 1240.690 kb on + strand, within B158DRAFT_1202 at 1240.696 kb on + strand, within B158DRAFT_1202 at 1240.696 kb on + strand, within B158DRAFT_1202 at 1240.745 kb on - strand, within B158DRAFT_1202 at 1240.778 kb on - strand, within B158DRAFT_1202 at 1240.848 kb on + strand, within B158DRAFT_1202 at 1240.855 kb on + strand, within B158DRAFT_1202 at 1240.855 kb on + strand, within B158DRAFT_1202 at 1240.863 kb on - strand, within B158DRAFT_1202 at 1240.926 kb on + strand, within B158DRAFT_1202 at 1240.928 kb on - strand, within B158DRAFT_1202 at 1240.929 kb on - strand, within B158DRAFT_1202 at 1240.931 kb on + strand, within B158DRAFT_1202 at 1240.934 kb on - strand, within B158DRAFT_1202 at 1241.036 kb on - strand, within B158DRAFT_1202 at 1241.040 kb on + strand, within B158DRAFT_1202 at 1241.041 kb on - strand, within B158DRAFT_1202 at 1241.100 kb on + strand, within B158DRAFT_1202 at 1241.123 kb on + strand, within B158DRAFT_1202 at 1241.139 kb on - strand, within B158DRAFT_1202 at 1241.189 kb on + strand, within B158DRAFT_1202 at 1241.189 kb on + strand, within B158DRAFT_1202 at 1241.222 kb on + strand, within B158DRAFT_1202 at 1241.277 kb on + strand at 1241.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6.5 remove 1,239,015 - B158DRAFT_1200 0.34 -0.7 1,239,082 - B158DRAFT_1200 0.39 +0.1 1,239,142 + B158DRAFT_1200 0.43 -1.0 1,239,212 + B158DRAFT_1200 0.49 +0.4 1,239,302 - B158DRAFT_1200 0.55 -0.5 1,239,334 + B158DRAFT_1200 0.58 +0.0 1,239,352 + B158DRAFT_1200 0.59 -0.0 1,239,369 + B158DRAFT_1200 0.60 -0.2 1,239,371 + B158DRAFT_1200 0.60 -0.4 1,239,432 + B158DRAFT_1200 0.65 -0.1 1,239,487 + B158DRAFT_1200 0.69 -0.8 1,239,487 + B158DRAFT_1200 0.69 +0.1 1,239,526 - B158DRAFT_1200 0.72 -0.2 1,239,572 + B158DRAFT_1200 0.75 -0.7 1,239,814 + -0.1 1,239,822 - -0.2 1,240,175 + B158DRAFT_1201 0.48 -0.2 1,240,194 - B158DRAFT_1201 0.52 -0.8 1,240,202 - B158DRAFT_1201 0.54 -0.3 1,240,244 + B158DRAFT_1201 0.63 -0.5 1,240,252 - B158DRAFT_1201 0.65 -1.7 1,240,286 + B158DRAFT_1201 0.72 -0.4 1,240,293 + B158DRAFT_1201 0.74 -0.6 1,240,293 + B158DRAFT_1201 0.74 -0.3 1,240,301 - B158DRAFT_1201 0.75 -0.2 1,240,301 - B158DRAFT_1201 0.75 -0.2 1,240,439 + -0.2 1,240,467 - -1.6 1,240,472 - +0.0 1,240,507 - +0.2 1,240,565 - B158DRAFT_1202 0.16 -0.7 1,240,607 - B158DRAFT_1202 0.21 -0.6 1,240,661 - B158DRAFT_1202 0.27 +0.2 1,240,690 + B158DRAFT_1202 0.30 -1.0 1,240,696 + B158DRAFT_1202 0.31 -0.1 1,240,696 + B158DRAFT_1202 0.31 -0.1 1,240,745 - B158DRAFT_1202 0.36 +0.7 1,240,778 - B158DRAFT_1202 0.40 -0.1 1,240,848 + B158DRAFT_1202 0.47 -0.5 1,240,855 + B158DRAFT_1202 0.48 -0.7 1,240,855 + B158DRAFT_1202 0.48 -0.1 1,240,863 - B158DRAFT_1202 0.49 -0.5 1,240,926 + B158DRAFT_1202 0.56 -0.6 1,240,928 - B158DRAFT_1202 0.56 +0.2 1,240,929 - B158DRAFT_1202 0.57 +0.1 1,240,931 + B158DRAFT_1202 0.57 -0.2 1,240,934 - B158DRAFT_1202 0.57 +0.2 1,241,036 - B158DRAFT_1202 0.68 +0.2 1,241,040 + B158DRAFT_1202 0.69 -0.0 1,241,041 - B158DRAFT_1202 0.69 -0.0 1,241,100 + B158DRAFT_1202 0.76 +0.0 1,241,123 + B158DRAFT_1202 0.78 +0.5 1,241,139 - B158DRAFT_1202 0.80 +0.3 1,241,189 + B158DRAFT_1202 0.86 -0.5 1,241,189 + B158DRAFT_1202 0.86 -0.2 1,241,222 + B158DRAFT_1202 0.89 +0.1 1,241,277 + -0.0 1,241,291 + +0.2
Or see this region's nucleotide sequence