Experiment: m.b. pH6.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1152 and B158DRAFT_1153 are separated by 110 nucleotides B158DRAFT_1153 and B158DRAFT_1154 are separated by 55 nucleotides B158DRAFT_1154 and B158DRAFT_1155 are separated by 25 nucleotides
B158DRAFT_1152: B158DRAFT_1152 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 1,187,825 to 1,188,964
_1152
B158DRAFT_1153: B158DRAFT_1153 - histidyl-tRNA synthetase (EC 6.1.1.21), at 1,189,075 to 1,190,346
_1153
B158DRAFT_1154: B158DRAFT_1154 - Uncharacterized protein conserved in bacteria, at 1,190,402 to 1,191,031
_1154
B158DRAFT_1155: B158DRAFT_1155 - Beta-barrel assembly machine subunit BamB, at 1,191,057 to 1,192,223
_1155
Position (kb)
1189
1190
1191 Strain fitness (log2 ratio)
-2
-1
0
1 at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.362 kb on - strand at 1190.362 kb on - strand at 1190.520 kb on + strand, within B158DRAFT_1154 at 1190.543 kb on - strand, within B158DRAFT_1154 at 1190.566 kb on - strand, within B158DRAFT_1154 at 1190.618 kb on - strand, within B158DRAFT_1154 at 1190.689 kb on - strand, within B158DRAFT_1154 at 1190.856 kb on + strand, within B158DRAFT_1154
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6.5 remove 1,190,354 + +0.1 1,190,354 + -1.2 1,190,354 + -0.1 1,190,354 + -0.6 1,190,354 + -0.1 1,190,354 + +0.3 1,190,354 + -0.8 1,190,354 + -0.2 1,190,362 - -1.6 1,190,362 - +0.2 1,190,520 + B158DRAFT_1154 0.19 -1.3 1,190,543 - B158DRAFT_1154 0.22 +0.4 1,190,566 - B158DRAFT_1154 0.26 -1.8 1,190,618 - B158DRAFT_1154 0.34 -0.6 1,190,689 - B158DRAFT_1154 0.46 -1.8 1,190,856 + B158DRAFT_1154 0.72 -0.8
Or see this region's nucleotide sequence