Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0172

Experiment: m.b. pH6.5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0169 and B158DRAFT_0170 are separated by 11 nucleotidesB158DRAFT_0170 and B158DRAFT_0171 are separated by 25 nucleotidesB158DRAFT_0171 and B158DRAFT_0172 are separated by 19 nucleotidesB158DRAFT_0172 and B158DRAFT_0173 are separated by 111 nucleotidesB158DRAFT_0173 and B158DRAFT_0174 are separated by 110 nucleotides B158DRAFT_0169: B158DRAFT_0169 - hypothetical protein, at 168,263 to 168,457 _0169 B158DRAFT_0170: B158DRAFT_0170 - Uncharacterized protein conserved in bacteria, at 168,469 to 168,801 _0170 B158DRAFT_0171: B158DRAFT_0171 - Glutathione S-transferase, at 168,827 to 169,423 _0171 B158DRAFT_0172: B158DRAFT_0172 - ATPases of the AAA+ class, at 169,443 to 170,942 _0172 B158DRAFT_0173: B158DRAFT_0173 - Ubiquinone biosynthesis protein COQ7, at 171,054 to 171,692 _0173 B158DRAFT_0174: B158DRAFT_0174 - hypothetical protein, at 171,803 to 172,174 _0174 Position (kb) 169 170 171Strain fitness (log2 ratio) -2 -1 0 1at 168.454 kb on - strandat 168.531 kb on - strand, within B158DRAFT_0170at 168.535 kb on + strand, within B158DRAFT_0170at 168.545 kb on + strand, within B158DRAFT_0170at 168.553 kb on - strand, within B158DRAFT_0170at 168.561 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.573 kb on - strand, within B158DRAFT_0170at 168.640 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.743 kb on - strand, within B158DRAFT_0170at 168.839 kb on - strandat 168.934 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.975 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.113 kb on + strand, within B158DRAFT_0171at 169.114 kb on - strand, within B158DRAFT_0171at 169.141 kb on + strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.440 kb on - strandat 169.508 kb on - strandat 169.548 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.585 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.587 kb on + strandat 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.593 kb on - strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.624 kb on + strand, within B158DRAFT_0172at 169.625 kb on + strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.632 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.634 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.650 kb on - strand, within B158DRAFT_0172at 169.713 kb on + strand, within B158DRAFT_0172at 169.854 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.859 kb on + strand, within B158DRAFT_0172at 169.866 kb on + strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.867 kb on - strand, within B158DRAFT_0172at 169.874 kb on - strand, within B158DRAFT_0172at 169.874 kb on - strand, within B158DRAFT_0172at 170.021 kb on - strand, within B158DRAFT_0172at 170.105 kb on - strand, within B158DRAFT_0172at 170.114 kb on + strand, within B158DRAFT_0172at 170.114 kb on + strand, within B158DRAFT_0172at 170.117 kb on - strand, within B158DRAFT_0172at 170.185 kb on - strand, within B158DRAFT_0172at 170.199 kb on + strand, within B158DRAFT_0172at 170.199 kb on + strand, within B158DRAFT_0172at 170.206 kb on + strand, within B158DRAFT_0172at 170.359 kb on - strand, within B158DRAFT_0172at 170.366 kb on + strand, within B158DRAFT_0172at 170.399 kb on + strand, within B158DRAFT_0172at 170.407 kb on - strand, within B158DRAFT_0172at 170.576 kb on - strand, within B158DRAFT_0172at 170.608 kb on + strand, within B158DRAFT_0172at 170.608 kb on + strand, within B158DRAFT_0172at 170.622 kb on + strand, within B158DRAFT_0172at 170.622 kb on + strand, within B158DRAFT_0172at 170.622 kb on + strand, within B158DRAFT_0172at 170.627 kb on + strand, within B158DRAFT_0172at 170.627 kb on + strand, within B158DRAFT_0172at 170.630 kb on - strand, within B158DRAFT_0172at 170.630 kb on - strand, within B158DRAFT_0172at 170.630 kb on - strand, within B158DRAFT_0172at 170.632 kb on + strand, within B158DRAFT_0172at 170.635 kb on - strand, within B158DRAFT_0172at 170.635 kb on - strand, within B158DRAFT_0172at 170.635 kb on - strand, within B158DRAFT_0172at 170.640 kb on - strand, within B158DRAFT_0172at 170.640 kb on - strand, within B158DRAFT_0172at 170.640 kb on - strand, within B158DRAFT_0172at 170.640 kb on - strand, within B158DRAFT_0172at 170.736 kb on + strand, within B158DRAFT_0172at 170.768 kb on - strand, within B158DRAFT_0172at 170.775 kb on + strand, within B158DRAFT_0172at 170.783 kb on - strand, within B158DRAFT_0172at 170.838 kb on + strandat 170.854 kb on - strandat 170.867 kb on - strandat 171.663 kb on + strandat 171.668 kb on + strandat 171.670 kb on + strandat 171.670 kb on + strandat 171.678 kb on - strandat 171.678 kb on - strandat 171.678 kb on - strandat 171.678 kb on - strandat 171.678 kb on - strandat 171.732 kb on - strandat 171.749 kb on + strandat 171.752 kb on - strandat 171.757 kb on - strandat 171.757 kb on - strandat 171.820 kb on + strandat 171.882 kb on - strand, within B158DRAFT_0174at 171.898 kb on + strand, within B158DRAFT_0174at 171.911 kb on + strand, within B158DRAFT_0174at 171.919 kb on - strand, within B158DRAFT_0174at 171.939 kb on + strand, within B158DRAFT_0174

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. pH6.5
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168,454 - -0.8
168,531 - B158DRAFT_0170 0.19 -0.2
168,535 + B158DRAFT_0170 0.20 -0.3
168,545 + B158DRAFT_0170 0.23 -0.1
168,553 - B158DRAFT_0170 0.25 +0.1
168,561 - B158DRAFT_0170 0.28 -0.1
168,567 - B158DRAFT_0170 0.29 -0.7
168,567 - B158DRAFT_0170 0.29 -1.0
168,573 - B158DRAFT_0170 0.31 +0.7
168,640 + B158DRAFT_0170 0.51 +0.2
168,735 + B158DRAFT_0170 0.80 -0.3
168,735 + B158DRAFT_0170 0.80 -0.3
168,743 - B158DRAFT_0170 0.82 -0.7
168,839 - -0.1
168,934 + B158DRAFT_0171 0.18 +0.5
168,944 + B158DRAFT_0171 0.20 -0.0
168,944 + B158DRAFT_0171 0.20 +0.5
168,944 + B158DRAFT_0171 0.20 -0.1
168,944 + B158DRAFT_0171 0.20 -0.0
168,944 + B158DRAFT_0171 0.20 +0.4
168,944 + B158DRAFT_0171 0.20 -0.3
168,952 - B158DRAFT_0171 0.21 -1.3
168,952 - B158DRAFT_0171 0.21 -0.1
168,952 - B158DRAFT_0171 0.21 -0.2
168,952 - B158DRAFT_0171 0.21 -0.3
168,952 - B158DRAFT_0171 0.21 +0.1
168,975 + B158DRAFT_0171 0.25 -1.8
168,997 + B158DRAFT_0171 0.28 -0.4
168,997 + B158DRAFT_0171 0.28 +0.2
168,997 + B158DRAFT_0171 0.28 -1.1
168,997 + B158DRAFT_0171 0.28 -0.6
169,005 - B158DRAFT_0171 0.30 +0.2
169,005 - B158DRAFT_0171 0.30 -0.6
169,083 - B158DRAFT_0171 0.43 -0.1
169,083 - B158DRAFT_0171 0.43 -0.5
169,083 - B158DRAFT_0171 0.43 +0.2
169,113 + B158DRAFT_0171 0.48 -0.1
169,114 - B158DRAFT_0171 0.48 -0.1
169,141 + B158DRAFT_0171 0.53 -0.4
169,280 - B158DRAFT_0171 0.76 -0.0
169,280 - B158DRAFT_0171 0.76 +0.0
169,440 - -0.4
169,508 - -0.2
169,548 + +0.2
169,585 + -0.7
169,585 + -0.5
169,585 + -0.3
169,585 + +0.0
169,585 + -0.7
169,585 + +0.1
169,585 + -0.4
169,585 + -0.0
169,585 + -0.5
169,585 + -0.3
169,587 + -0.2
169,587 + +0.2
169,587 + -1.7
169,593 - B158DRAFT_0172 0.10 -0.2
169,593 - B158DRAFT_0172 0.10 -0.3
169,593 - B158DRAFT_0172 0.10 +0.3
169,593 - B158DRAFT_0172 0.10 +0.0
169,593 - B158DRAFT_0172 0.10 -0.3
169,593 - B158DRAFT_0172 0.10 -0.2
169,593 - B158DRAFT_0172 0.10 -0.1
169,593 - B158DRAFT_0172 0.10 -0.7
169,593 - B158DRAFT_0172 0.10 +0.4
169,593 - B158DRAFT_0172 0.10 -0.1
169,593 - B158DRAFT_0172 0.10 -0.5
169,593 - B158DRAFT_0172 0.10 +0.0
169,624 + B158DRAFT_0172 0.12 -0.4
169,624 + B158DRAFT_0172 0.12 -0.6
169,625 + B158DRAFT_0172 0.12 -0.9
169,632 - B158DRAFT_0172 0.13 +0.7
169,632 - B158DRAFT_0172 0.13 -0.0
169,632 - B158DRAFT_0172 0.13 -0.2
169,632 - B158DRAFT_0172 0.13 +0.5
169,634 - B158DRAFT_0172 0.13 -0.3
169,634 - B158DRAFT_0172 0.13 +0.1
169,650 - B158DRAFT_0172 0.14 -0.5
169,650 - B158DRAFT_0172 0.14 -0.0
169,713 + B158DRAFT_0172 0.18 -0.8
169,854 + B158DRAFT_0172 0.27 -0.3
169,859 + B158DRAFT_0172 0.28 +0.4
169,859 + B158DRAFT_0172 0.28 +0.1
169,859 + B158DRAFT_0172 0.28 -0.1
169,859 + B158DRAFT_0172 0.28 -0.5
169,866 + B158DRAFT_0172 0.28 -0.0
169,867 - B158DRAFT_0172 0.28 -0.4
169,867 - B158DRAFT_0172 0.28 -0.1
169,867 - B158DRAFT_0172 0.28 +0.1
169,867 - B158DRAFT_0172 0.28 -1.4
169,867 - B158DRAFT_0172 0.28 -0.0
169,874 - B158DRAFT_0172 0.29 +0.6
169,874 - B158DRAFT_0172 0.29 -0.2
170,021 - B158DRAFT_0172 0.39 -0.3
170,105 - B158DRAFT_0172 0.44 +0.2
170,114 + B158DRAFT_0172 0.45 -0.2
170,114 + B158DRAFT_0172 0.45 +0.6
170,117 - B158DRAFT_0172 0.45 -0.2
170,185 - B158DRAFT_0172 0.49 -0.3
170,199 + B158DRAFT_0172 0.50 +0.5
170,199 + B158DRAFT_0172 0.50 +0.2
170,206 + B158DRAFT_0172 0.51 -0.3
170,359 - B158DRAFT_0172 0.61 +0.3
170,366 + B158DRAFT_0172 0.62 -0.4
170,399 + B158DRAFT_0172 0.64 -0.6
170,407 - B158DRAFT_0172 0.64 +0.2
170,576 - B158DRAFT_0172 0.76 -0.1
170,608 + B158DRAFT_0172 0.78 +0.3
170,608 + B158DRAFT_0172 0.78 +0.1
170,622 + B158DRAFT_0172 0.79 +0.2
170,622 + B158DRAFT_0172 0.79 -0.2
170,622 + B158DRAFT_0172 0.79 +0.3
170,627 + B158DRAFT_0172 0.79 -0.8
170,627 + B158DRAFT_0172 0.79 +0.4
170,630 - B158DRAFT_0172 0.79 -0.4
170,630 - B158DRAFT_0172 0.79 -0.2
170,630 - B158DRAFT_0172 0.79 -0.5
170,632 + B158DRAFT_0172 0.79 +0.1
170,635 - B158DRAFT_0172 0.79 +0.0
170,635 - B158DRAFT_0172 0.79 -0.6
170,635 - B158DRAFT_0172 0.79 -0.2
170,640 - B158DRAFT_0172 0.80 -0.0
170,640 - B158DRAFT_0172 0.80 +0.3
170,640 - B158DRAFT_0172 0.80 -0.5
170,640 - B158DRAFT_0172 0.80 +0.1
170,736 + B158DRAFT_0172 0.86 +0.4
170,768 - B158DRAFT_0172 0.88 -0.5
170,775 + B158DRAFT_0172 0.89 +0.1
170,783 - B158DRAFT_0172 0.89 +0.0
170,838 + +0.2
170,854 - -0.1
170,867 - +0.3
171,663 + +0.1
171,668 + +0.4
171,670 + -0.2
171,670 + +0.2
171,678 - +0.2
171,678 - -1.8
171,678 - -0.2
171,678 - -1.9
171,678 - -0.8
171,732 - +0.2
171,749 + -0.3
171,752 - +0.0
171,757 - -0.3
171,757 - -0.7
171,820 + -0.4
171,882 - B158DRAFT_0174 0.21 -1.7
171,898 + B158DRAFT_0174 0.26 -0.1
171,911 + B158DRAFT_0174 0.29 -0.2
171,919 - B158DRAFT_0174 0.31 -0.2
171,939 + B158DRAFT_0174 0.37 -0.3

Or see this region's nucleotide sequence