Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_871 and PfGW456L13_872 overlap by 20 nucleotides PfGW456L13_872 and PfGW456L13_873 are separated by 206 nucleotides
PfGW456L13_871 - Sterol desaturase, at 977,596 to 978,831
_871
PfGW456L13_872 - FIG139438: lipoprotein B, at 978,812 to 979,444
_872
PfGW456L13_873 - Porphobilinogen synthase (EC 4.2.1.24), at 979,651 to 980,664
_873
Position (kb) 978
979
980 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 977.867 kb on - strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.977 kb on - strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.005 kb on - strand, within PfGW456L13_871 at 978.074 kb on - strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.193 kb on + strand, within PfGW456L13_871 at 978.193 kb on + strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.210 kb on + strand, within PfGW456L13_871 at 978.210 kb on + strand, within PfGW456L13_871 at 978.211 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.431 kb on - strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.544 kb on + strand, within PfGW456L13_871 at 978.544 kb on + strand, within PfGW456L13_871 at 978.545 kb on - strand, within PfGW456L13_871 at 978.701 kb on + strand, within PfGW456L13_871 at 978.766 kb on + strand at 978.766 kb on + strand at 978.767 kb on - strand at 978.793 kb on + strand at 978.793 kb on + strand at 978.793 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.829 kb on + strand at 978.972 kb on + strand, within PfGW456L13_872 at 978.972 kb on + strand, within PfGW456L13_872 at 978.972 kb on + strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 979.020 kb on + strand, within PfGW456L13_872 at 979.140 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.270 kb on - strand, within PfGW456L13_872 at 979.270 kb on - strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.291 kb on - strand, within PfGW456L13_872 at 979.291 kb on - strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.364 kb on + strand, within PfGW456L13_872 at 979.397 kb on + strand at 979.414 kb on - strand at 979.477 kb on + strand at 979.534 kb on + strand at 979.535 kb on - strand at 979.535 kb on - strand at 979.583 kb on + strand at 979.584 kb on - strand at 979.584 kb on - strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.597 kb on + strand at 979.598 kb on - strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.781 kb on + strand, within PfGW456L13_873 at 979.782 kb on - strand, within PfGW456L13_873 at 980.089 kb on + strand, within PfGW456L13_873 at 980.090 kb on - strand, within PfGW456L13_873 at 980.254 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.267 kb on - strand, within PfGW456L13_873 at 980.278 kb on + strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.282 kb on - strand, within PfGW456L13_873 at 980.344 kb on + strand, within PfGW456L13_873 at 980.345 kb on - strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.444 kb on - strand, within PfGW456L13_873
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 977,867 - PfGW456L13_871 0.22 +0.3 977,869 + PfGW456L13_871 0.22 -0.0 977,869 + PfGW456L13_871 0.22 -0.5 977,869 + PfGW456L13_871 0.22 +0.0 977,870 - PfGW456L13_871 0.22 +0.3 977,870 - PfGW456L13_871 0.22 +0.9 977,870 - PfGW456L13_871 0.22 -1.6 977,944 + PfGW456L13_871 0.28 -0.3 977,944 + PfGW456L13_871 0.28 -1.1 977,944 + PfGW456L13_871 0.28 -0.7 977,944 + PfGW456L13_871 0.28 +0.4 977,945 - PfGW456L13_871 0.28 +0.5 977,945 - PfGW456L13_871 0.28 +0.1 977,945 - PfGW456L13_871 0.28 -0.4 977,945 - PfGW456L13_871 0.28 +1.3 977,945 - PfGW456L13_871 0.28 +0.0 977,945 - PfGW456L13_871 0.28 -0.4 977,945 - PfGW456L13_871 0.28 +0.8 977,977 - PfGW456L13_871 0.31 -0.7 978,004 + PfGW456L13_871 0.33 +0.3 978,004 + PfGW456L13_871 0.33 -0.6 978,004 + PfGW456L13_871 0.33 +0.2 978,004 + PfGW456L13_871 0.33 -1.4 978,004 + PfGW456L13_871 0.33 +0.0 978,005 - PfGW456L13_871 0.33 -1.8 978,074 - PfGW456L13_871 0.39 -1.7 978,178 + PfGW456L13_871 0.47 -0.4 978,178 + PfGW456L13_871 0.47 +0.3 978,178 + PfGW456L13_871 0.47 -0.8 978,178 + PfGW456L13_871 0.47 -0.1 978,178 + PfGW456L13_871 0.47 -1.4 978,178 + PfGW456L13_871 0.47 +0.4 978,178 + PfGW456L13_871 0.47 +1.3 978,179 - PfGW456L13_871 0.47 -0.4 978,179 - PfGW456L13_871 0.47 +1.0 978,179 - PfGW456L13_871 0.47 -0.2 978,179 - +3.3 978,179 - PfGW456L13_871 0.47 -0.7 978,179 - PfGW456L13_871 0.47 +0.8 978,179 - PfGW456L13_871 0.47 +0.9 978,179 - PfGW456L13_871 0.47 +2.2 978,179 - PfGW456L13_871 0.47 -1.1 978,179 - PfGW456L13_871 0.47 -1.1 978,179 - PfGW456L13_871 0.47 +0.6 978,193 + PfGW456L13_871 0.48 -2.3 978,193 + PfGW456L13_871 0.48 -0.0 978,194 - PfGW456L13_871 0.48 -1.6 978,194 - PfGW456L13_871 0.48 +0.1 978,194 - PfGW456L13_871 0.48 +0.6 978,194 - PfGW456L13_871 0.48 +0.1 978,194 - PfGW456L13_871 0.48 -0.1 978,210 + PfGW456L13_871 0.50 -0.4 978,210 + PfGW456L13_871 0.50 -1.5 978,211 - PfGW456L13_871 0.50 -1.1 978,326 - PfGW456L13_871 0.59 -0.4 978,326 - PfGW456L13_871 0.59 -0.7 978,326 - PfGW456L13_871 0.59 -0.2 978,326 - PfGW456L13_871 0.59 -1.8 978,431 - PfGW456L13_871 0.68 -1.1 978,502 + PfGW456L13_871 0.73 +0.2 978,502 + PfGW456L13_871 0.73 +0.4 978,502 + PfGW456L13_871 0.73 +0.0 978,502 + PfGW456L13_871 0.73 -1.6 978,503 - PfGW456L13_871 0.73 -1.2 978,503 - PfGW456L13_871 0.73 +0.1 978,503 - PfGW456L13_871 0.73 +0.6 978,503 - PfGW456L13_871 0.73 +0.8 978,503 - PfGW456L13_871 0.73 -1.2 978,503 - PfGW456L13_871 0.73 -0.7 978,526 + PfGW456L13_871 0.75 +1.5 978,526 + PfGW456L13_871 0.75 -0.2 978,526 + PfGW456L13_871 0.75 -1.7 978,526 + PfGW456L13_871 0.75 -0.8 978,526 + PfGW456L13_871 0.75 +1.2 978,527 - PfGW456L13_871 0.75 +0.7 978,527 - PfGW456L13_871 0.75 -0.1 978,527 - PfGW456L13_871 0.75 -0.4 978,544 + PfGW456L13_871 0.77 +0.4 978,544 + PfGW456L13_871 0.77 +0.8 978,545 - PfGW456L13_871 0.77 -0.6 978,701 + PfGW456L13_871 0.89 -0.1 978,766 + +1.6 978,766 + +0.7 978,767 - -0.6 978,793 + -0.4 978,793 + -1.1 978,793 - +2.5 978,794 - +1.0 978,794 - -0.2 978,794 - -1.9 978,794 - -1.7 978,829 + +1.0 978,972 + PfGW456L13_872 0.25 -2.1 978,972 + PfGW456L13_872 0.25 -0.4 978,972 + PfGW456L13_872 0.25 +0.8 978,973 - PfGW456L13_872 0.25 -1.9 978,973 - PfGW456L13_872 0.25 -1.2 978,973 - PfGW456L13_872 0.25 -2.7 978,973 - PfGW456L13_872 0.25 -0.5 978,973 - PfGW456L13_872 0.25 +0.5 978,973 - PfGW456L13_872 0.25 -2.7 978,973 - PfGW456L13_872 0.25 -1.6 978,973 - PfGW456L13_872 0.25 -0.2 978,973 - PfGW456L13_872 0.25 -0.4 979,020 + PfGW456L13_872 0.33 +1.0 979,140 + PfGW456L13_872 0.52 -0.9 979,269 + PfGW456L13_872 0.72 -0.6 979,269 + PfGW456L13_872 0.72 -1.2 979,269 + PfGW456L13_872 0.72 -1.0 979,270 - PfGW456L13_872 0.72 -2.2 979,270 - PfGW456L13_872 0.72 -0.2 979,290 + PfGW456L13_872 0.76 -0.8 979,290 + PfGW456L13_872 0.76 -2.1 979,290 + PfGW456L13_872 0.76 -0.7 979,291 - PfGW456L13_872 0.76 -2.0 979,291 - PfGW456L13_872 0.76 -1.6 979,335 + PfGW456L13_872 0.83 -2.4 979,335 + PfGW456L13_872 0.83 -0.7 979,335 + PfGW456L13_872 0.83 -1.2 979,335 + PfGW456L13_872 0.83 -1.7 979,336 - PfGW456L13_872 0.83 +0.3 979,336 - PfGW456L13_872 0.83 -1.2 979,336 - PfGW456L13_872 0.83 -1.9 979,364 + PfGW456L13_872 0.87 -1.5 979,397 + -1.5 979,414 - -2.3 979,477 + -0.9 979,534 + +0.2 979,535 - +0.3 979,535 - +1.0 979,583 + +2.8 979,584 - +1.6 979,584 - +1.3 979,586 + +0.2 979,586 + +0.6 979,586 + +2.8 979,586 + -0.1 979,586 + +1.8 979,586 + +0.5 979,586 + +0.0 979,587 - -1.1 979,587 - -0.1 979,587 - -0.7 979,587 - +0.5 979,587 - +0.8 979,587 - -0.3 979,587 - -0.3 979,587 - -0.0 979,587 - -0.1 979,587 - +0.1 979,587 - +1.3 979,587 - +0.5 979,587 - +0.7 979,587 - -0.5 979,597 + +0.3 979,598 - -2.5 979,608 + +0.9 979,608 + -0.5 979,608 + +0.3 979,608 + -0.2 979,608 + +0.0 979,609 - -0.7 979,609 - -0.8 979,609 - +0.2 979,609 - +2.0 979,609 - -1.4 979,609 - +0.1 979,609 - +0.4 979,610 + +0.3 979,610 + -1.1 979,610 + +0.5 979,610 + -0.0 979,610 + +0.1 979,610 + +0.2 979,610 + -0.4 979,610 + -2.3 979,610 + +0.0 979,610 + +1.0 979,610 + -0.5 979,611 - -1.0 979,611 - +1.6 979,611 - -1.3 979,611 - -0.1 979,611 - -2.2 979,611 - +0.3 979,611 - +2.2 979,781 + PfGW456L13_873 0.13 +0.3 979,782 - PfGW456L13_873 0.13 -0.6 980,089 + PfGW456L13_873 0.43 +0.8 980,090 - PfGW456L13_873 0.43 -0.5 980,254 + PfGW456L13_873 0.59 -0.2 980,266 + PfGW456L13_873 0.61 +0.8 980,266 + PfGW456L13_873 0.61 -0.6 980,266 + PfGW456L13_873 0.61 -0.7 980,266 + PfGW456L13_873 0.61 -0.6 980,266 + PfGW456L13_873 0.61 +0.5 980,266 + PfGW456L13_873 0.61 +1.2 980,267 - PfGW456L13_873 0.61 -1.7 980,278 + PfGW456L13_873 0.62 +0.1 980,279 - PfGW456L13_873 0.62 +1.4 980,279 - PfGW456L13_873 0.62 -0.4 980,279 - PfGW456L13_873 0.62 -0.3 980,279 - PfGW456L13_873 0.62 +0.3 980,279 - PfGW456L13_873 0.62 +0.3 980,282 - PfGW456L13_873 0.62 +1.0 980,344 + PfGW456L13_873 0.68 -0.5 980,345 - PfGW456L13_873 0.68 -0.2 980,443 + PfGW456L13_873 0.78 -1.5 980,443 + PfGW456L13_873 0.78 +0.6 980,443 + PfGW456L13_873 0.78 +0.6 980,444 - PfGW456L13_873 0.78 +1.5
Or see this region's nucleotide sequence