Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_733 and PfGW456L13_734 are separated by 35 nucleotides PfGW456L13_734 and PfGW456L13_735 are separated by 378 nucleotides
PfGW456L13_733 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 832,445 to 834,001
_733
PfGW456L13_734 - hypothetical protein, at 834,037 to 834,369
_734
PfGW456L13_735 - hypothetical protein, at 834,748 to 839,163
_735
Position (kb) 834
835 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 833.058 kb on - strand, within PfGW456L13_733 at 833.058 kb on - strand, within PfGW456L13_733 at 833.058 kb on - strand, within PfGW456L13_733 at 833.058 kb on - strand, within PfGW456L13_733 at 833.061 kb on + strand, within PfGW456L13_733 at 833.061 kb on + strand, within PfGW456L13_733 at 833.061 kb on + strand, within PfGW456L13_733 at 833.061 kb on + strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.062 kb on - strand, within PfGW456L13_733 at 833.148 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.309 kb on + strand, within PfGW456L13_733 at 833.310 kb on - strand, within PfGW456L13_733 at 833.310 kb on - strand, within PfGW456L13_733 at 833.310 kb on - strand, within PfGW456L13_733 at 833.420 kb on + strand, within PfGW456L13_733 at 833.420 kb on + strand, within PfGW456L13_733 at 833.421 kb on - strand, within PfGW456L13_733 at 833.421 kb on - strand, within PfGW456L13_733 at 833.421 kb on - strand, within PfGW456L13_733 at 833.421 kb on - strand, within PfGW456L13_733 at 833.421 kb on - strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.495 kb on + strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.496 kb on - strand, within PfGW456L13_733 at 833.543 kb on + strand, within PfGW456L13_733 at 833.544 kb on - strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.710 kb on + strand, within PfGW456L13_733 at 833.711 kb on - strand, within PfGW456L13_733 at 833.711 kb on - strand, within PfGW456L13_733 at 833.711 kb on - strand, within PfGW456L13_733 at 833.711 kb on - strand, within PfGW456L13_733 at 833.873 kb on + strand at 833.874 kb on - strand at 833.874 kb on - strand at 833.874 kb on - strand at 834.095 kb on + strand, within PfGW456L13_734 at 834.096 kb on - strand, within PfGW456L13_734 at 834.096 kb on - strand, within PfGW456L13_734 at 834.096 kb on - strand, within PfGW456L13_734 at 834.121 kb on + strand, within PfGW456L13_734 at 834.121 kb on + strand, within PfGW456L13_734 at 834.121 kb on + strand, within PfGW456L13_734 at 834.122 kb on - strand, within PfGW456L13_734 at 834.122 kb on - strand, within PfGW456L13_734 at 834.218 kb on + strand, within PfGW456L13_734 at 834.265 kb on + strand, within PfGW456L13_734 at 834.265 kb on + strand, within PfGW456L13_734 at 834.265 kb on + strand, within PfGW456L13_734 at 834.265 kb on + strand, within PfGW456L13_734 at 834.266 kb on - strand, within PfGW456L13_734 at 834.276 kb on - strand, within PfGW456L13_734 at 834.276 kb on - strand, within PfGW456L13_734 at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.371 kb on + strand at 834.372 kb on - strand at 834.372 kb on - strand at 834.372 kb on - strand at 834.434 kb on - strand at 834.614 kb on - strand at 834.614 kb on - strand at 834.614 kb on - strand at 834.659 kb on + strand at 834.659 kb on + strand at 834.659 kb on + strand at 834.660 kb on - strand at 834.797 kb on + strand at 834.797 kb on + strand at 834.797 kb on + strand at 834.797 kb on + strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.798 kb on - strand at 834.831 kb on + strand at 834.831 kb on + strand at 834.831 kb on + strand at 834.832 kb on - strand at 834.906 kb on + strand at 834.907 kb on - strand at 834.907 kb on - strand at 834.907 kb on - strand at 834.935 kb on + strand at 834.936 kb on - strand at 834.986 kb on + strand at 834.987 kb on - strand at 835.188 kb on + strand at 835.188 kb on + strand at 835.248 kb on + strand, within PfGW456L13_735 at 835.249 kb on - strand, within PfGW456L13_735 at 835.249 kb on - strand, within PfGW456L13_735 at 835.249 kb on - strand, within PfGW456L13_735
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 833,058 - PfGW456L13_733 0.39 +0.4 833,058 - PfGW456L13_733 0.39 +0.5 833,058 - PfGW456L13_733 0.39 -0.3 833,058 - PfGW456L13_733 0.39 -0.0 833,061 + PfGW456L13_733 0.40 +0.5 833,061 + PfGW456L13_733 0.40 +0.2 833,061 + PfGW456L13_733 0.40 -0.6 833,061 + PfGW456L13_733 0.40 +1.0 833,062 - PfGW456L13_733 0.40 -1.0 833,062 - PfGW456L13_733 0.40 -1.8 833,062 - PfGW456L13_733 0.40 +1.9 833,062 - PfGW456L13_733 0.40 +0.9 833,062 - PfGW456L13_733 0.40 -0.8 833,062 - PfGW456L13_733 0.40 +0.2 833,062 - PfGW456L13_733 0.40 +0.3 833,148 + PfGW456L13_733 0.45 +1.2 833,309 + PfGW456L13_733 0.55 -0.8 833,309 + PfGW456L13_733 0.55 -0.0 833,309 + PfGW456L13_733 0.55 +0.4 833,309 + PfGW456L13_733 0.55 +0.7 833,309 + PfGW456L13_733 0.55 -0.9 833,309 + PfGW456L13_733 0.55 -0.6 833,309 + PfGW456L13_733 0.55 -1.2 833,309 + PfGW456L13_733 0.55 +0.6 833,309 + PfGW456L13_733 0.55 +0.8 833,309 + PfGW456L13_733 0.55 -0.7 833,309 + PfGW456L13_733 0.55 +0.5 833,309 + PfGW456L13_733 0.55 +1.9 833,310 - PfGW456L13_733 0.56 +0.4 833,310 - PfGW456L13_733 0.56 +1.9 833,310 - PfGW456L13_733 0.56 +1.1 833,420 + PfGW456L13_733 0.63 +0.8 833,420 + PfGW456L13_733 0.63 +0.2 833,421 - PfGW456L13_733 0.63 +1.0 833,421 - PfGW456L13_733 0.63 +1.5 833,421 - PfGW456L13_733 0.63 +0.5 833,421 - PfGW456L13_733 0.63 -0.3 833,421 - PfGW456L13_733 0.63 +0.0 833,495 + PfGW456L13_733 0.67 -2.1 833,495 + PfGW456L13_733 0.67 +2.0 833,495 + PfGW456L13_733 0.67 +0.9 833,495 + PfGW456L13_733 0.67 -0.9 833,495 + PfGW456L13_733 0.67 +1.1 833,495 + PfGW456L13_733 0.67 -0.3 833,495 + PfGW456L13_733 0.67 -0.9 833,495 + PfGW456L13_733 0.67 +0.4 833,495 + PfGW456L13_733 0.67 -2.0 833,495 + PfGW456L13_733 0.67 -0.3 833,495 + PfGW456L13_733 0.67 +0.1 833,496 - PfGW456L13_733 0.68 -2.6 833,496 - PfGW456L13_733 0.68 +0.3 833,496 - PfGW456L13_733 0.68 +1.3 833,496 - PfGW456L13_733 0.68 -0.8 833,496 - PfGW456L13_733 0.68 +0.0 833,496 - PfGW456L13_733 0.68 +1.0 833,496 - PfGW456L13_733 0.68 +0.6 833,496 - PfGW456L13_733 0.68 +0.2 833,543 + PfGW456L13_733 0.71 -0.7 833,544 - PfGW456L13_733 0.71 -0.0 833,710 + PfGW456L13_733 0.81 +1.4 833,710 + PfGW456L13_733 0.81 -0.9 833,710 + PfGW456L13_733 0.81 +0.8 833,710 + PfGW456L13_733 0.81 -1.6 833,710 + PfGW456L13_733 0.81 -0.4 833,710 + PfGW456L13_733 0.81 -0.2 833,711 - PfGW456L13_733 0.81 -1.5 833,711 - PfGW456L13_733 0.81 -1.1 833,711 - PfGW456L13_733 0.81 -0.2 833,711 - PfGW456L13_733 0.81 +0.1 833,873 + -0.1 833,874 - -0.0 833,874 - +1.1 833,874 - -0.3 834,095 + PfGW456L13_734 0.17 +0.3 834,096 - PfGW456L13_734 0.18 +2.4 834,096 - PfGW456L13_734 0.18 +0.0 834,096 - PfGW456L13_734 0.18 -0.3 834,121 + PfGW456L13_734 0.25 -1.9 834,121 + PfGW456L13_734 0.25 +0.5 834,121 + PfGW456L13_734 0.25 +2.0 834,122 - PfGW456L13_734 0.26 +0.6 834,122 - PfGW456L13_734 0.26 +1.2 834,218 + PfGW456L13_734 0.54 +1.4 834,265 + PfGW456L13_734 0.68 +0.6 834,265 + PfGW456L13_734 0.68 -1.1 834,265 + PfGW456L13_734 0.68 +0.6 834,265 + PfGW456L13_734 0.68 -0.5 834,266 - PfGW456L13_734 0.69 +0.0 834,276 - PfGW456L13_734 0.72 +1.2 834,276 - PfGW456L13_734 0.72 +0.2 834,371 + +0.9 834,371 + -0.1 834,371 + -0.8 834,371 + -0.0 834,371 + -1.0 834,371 + -0.2 834,371 + +0.5 834,371 + +1.1 834,371 + -0.5 834,371 + +0.3 834,372 - -1.2 834,372 - -1.0 834,372 - +1.0 834,434 - -0.4 834,614 - +0.5 834,614 - +0.5 834,614 - +0.6 834,659 + -2.3 834,659 + +0.7 834,659 + +0.3 834,660 - +1.0 834,797 + +0.7 834,797 + +1.0 834,797 + -0.7 834,797 + -0.2 834,798 - -0.6 834,798 - -0.6 834,798 - -1.0 834,798 - -0.2 834,798 - -0.9 834,798 - +0.9 834,798 - -0.3 834,798 - +1.8 834,831 + -0.3 834,831 + +0.1 834,831 + +1.3 834,832 - +0.5 834,906 + -1.7 834,907 - -0.2 834,907 - -0.2 834,907 - -1.7 834,935 + +0.1 834,936 - -1.0 834,986 + +1.8 834,987 - -0.9 835,188 + +0.3 835,188 + -2.8 835,248 + PfGW456L13_735 0.11 -2.4 835,249 - PfGW456L13_735 0.11 -0.5 835,249 - PfGW456L13_735 0.11 -0.6 835,249 - PfGW456L13_735 0.11 -0.6
Or see this region's nucleotide sequence