Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_5054

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
5,634,703	+		PfGW456L13_5053	0.51	-1.2
5,634,703	+		PfGW456L13_5053	0.51	+0.1
5,634,704	-		PfGW456L13_5053	0.52	-1.8
5,634,721	+		PfGW456L13_5053	0.53	+8.0
5,634,721	+		PfGW456L13_5053	0.53	+1.5
5,634,721	+		PfGW456L13_5053	0.53	+1.0
5,634,721	+		PfGW456L13_5053	0.53	+1.6
5,634,721	+		PfGW456L13_5053	0.53	-1.7
5,634,722	-		PfGW456L13_5053	0.53	-1.8
5,634,722	-		PfGW456L13_5053	0.53	-1.4
5,634,722	-		PfGW456L13_5053	0.53	-1.4
5,634,722	-		PfGW456L13_5053	0.53	-1.2
5,634,722	-		PfGW456L13_5053	0.53	-0.9
5,634,722	-		PfGW456L13_5053	0.53	+0.8
5,634,722	-		PfGW456L13_5053	0.53	-1.8
5,634,775	-		PfGW456L13_5053	0.56	-0.9
5,634,775	-		PfGW456L13_5053	0.56	-0.7
5,634,787	+		PfGW456L13_5053	0.57	-0.8
5,634,790	+		PfGW456L13_5053	0.58	+1.4
5,634,790	+		PfGW456L13_5053	0.58	+0.7
5,634,790	+		PfGW456L13_5053	0.58	+2.2
5,634,791	-		PfGW456L13_5053	0.58	-0.0
5,634,791	-		PfGW456L13_5053	0.58	-0.5
5,634,809	+		PfGW456L13_5053	0.59	-1.9
5,634,809	+		PfGW456L13_5053	0.59	-0.6
5,634,810	-		PfGW456L13_5053	0.59	-1.1
5,634,827	+		PfGW456L13_5053	0.60	+0.9
5,634,828	-		PfGW456L13_5053	0.60	-1.5
5,634,853	+		PfGW456L13_5053	0.62	+1.5
5,634,853	+		PfGW456L13_5053	0.62	+1.4
5,634,853	+		PfGW456L13_5053	0.62	+0.5
5,634,854	-		PfGW456L13_5053	0.62	-2.3
5,634,854	-		PfGW456L13_5053	0.62	-0.7
5,634,854	-		PfGW456L13_5053	0.62	+1.3
5,634,856	+		PfGW456L13_5053	0.62	+1.3
5,634,856	+		PfGW456L13_5053	0.62	+0.9
5,634,856	+		PfGW456L13_5053	0.62	+0.7
5,634,857	-		PfGW456L13_5053	0.62	-0.2
5,634,910	+		PfGW456L13_5053	0.66	-0.0
5,634,910	+		PfGW456L13_5053	0.66	+1.5
5,634,911	-		PfGW456L13_5053	0.66	+0.0
5,634,911	-		PfGW456L13_5053	0.66	+0.7
5,634,985	+		PfGW456L13_5053	0.71	+2.8
5,634,986	-		PfGW456L13_5053	0.71	-0.4
5,634,986	-		PfGW456L13_5053	0.71	-1.0
5,634,994	+		PfGW456L13_5053	0.72	+3.6
5,634,994	+		PfGW456L13_5053	0.72	+3.3
5,634,995	-		PfGW456L13_5053	0.72	-2.1
5,634,995	-		PfGW456L13_5053	0.72	-0.2
5,635,018	+		PfGW456L13_5053	0.73	+2.6
5,635,018	+		PfGW456L13_5053	0.73	+5.5
5,635,018	+		PfGW456L13_5053	0.73	+4.8
5,635,018	+		PfGW456L13_5053	0.73	+6.4
5,635,018	+		PfGW456L13_5053	0.73	+5.5
5,635,018	+		PfGW456L13_5053	0.73	+6.5
5,635,018	+		PfGW456L13_5053	0.73	+4.2
5,635,019	-		PfGW456L13_5053	0.74	-0.3
5,635,132	+		PfGW456L13_5053	0.81	+5.4
5,635,132	+		PfGW456L13_5053	0.81	+7.3
5,635,132	+		PfGW456L13_5053	0.81	+7.3
5,635,133	-		PfGW456L13_5053	0.81	-0.9
5,635,133	-		PfGW456L13_5053	0.81	+1.1
5,635,133	-		PfGW456L13_5053	0.81	+0.4
5,635,133	-		PfGW456L13_5053	0.81	+0.3
5,635,133	-		PfGW456L13_5053	0.81	-0.1
5,635,161	+		PfGW456L13_5053	0.83	+6.7
5,635,168	+		PfGW456L13_5053	0.84	+8.0
5,635,169	-		PfGW456L13_5053	0.84	-0.9
5,635,169	-		PfGW456L13_5053	0.84	-2.5
5,635,238	-		PfGW456L13_5053	0.89	+0.4
5,635,238	-		PfGW456L13_5053	0.89	-0.7
5,635,243	+		PfGW456L13_5053	0.89	+6.4
5,635,261	+				+6.3
5,635,261	+				+7.7
5,635,261	+				+7.0
5,635,261	+				-0.6
5,635,309	+				+7.3
5,635,309	+				+8.2
5,635,396	+				+9.9
5,635,397	-				+0.2
5,635,454	+				+7.2
5,635,493	+				+2.1
5,635,494	-				-1.0
5,635,494	-				-1.2
5,635,600	+				+1.0
5,635,732	+		PfGW456L13_5054	0.16	+0.2
5,635,732	+		PfGW456L13_5054	0.16	-0.8
5,635,732	+		PfGW456L13_5054	0.16	+1.3
5,635,733	-		PfGW456L13_5054	0.16	-0.1
5,635,733	-		PfGW456L13_5054	0.16	-0.3
5,635,749	+		PfGW456L13_5054	0.17	+1.3
5,635,750	-		PfGW456L13_5054	0.17	-0.5
5,635,777	+		PfGW456L13_5054	0.19	+4.6
5,635,778	-		PfGW456L13_5054	0.19	-0.5
5,635,778	-		PfGW456L13_5054	0.19	+0.1
5,635,885	+		PfGW456L13_5054	0.26	-0.2
5,635,886	-		PfGW456L13_5054	0.26	+0.7
5,635,886	-		PfGW456L13_5054	0.26	-0.4
5,635,886	-		PfGW456L13_5054	0.26	-2.5
5,636,018	-		PfGW456L13_5054	0.34	-0.8
5,636,018	-		PfGW456L13_5054	0.34	-1.3
5,636,029	+		PfGW456L13_5054	0.35	+0.7
5,636,155	+		PfGW456L13_5054	0.42	+1.5
5,636,156	-		PfGW456L13_5054	0.43	-0.8
5,636,156	-		PfGW456L13_5054	0.43	-0.2
5,636,307	-		PfGW456L13_5054	0.52	-0.2
5,636,341	+		PfGW456L13_5054	0.54	+5.8
5,636,342	-		PfGW456L13_5054	0.54	-0.3
5,636,342	-		PfGW456L13_5054	0.54	-0.1
5,636,342	-		PfGW456L13_5054	0.54	+0.7
5,636,342	-		PfGW456L13_5054	0.54	-0.8
5,636,368	+		PfGW456L13_5054	0.56	+11.7
5,636,368	+		PfGW456L13_5054	0.56	+11.7
5,636,368	+		PfGW456L13_5054	0.56	+11.8
5,636,368	+		PfGW456L13_5054	0.56	+10.6
5,636,368	+		PfGW456L13_5054	0.56	+10.4
5,636,368	+		PfGW456L13_5054	0.56	+12.2
5,636,368	+		PfGW456L13_5054	0.56	+11.9
5,636,368	+		PfGW456L13_5054	0.56	+12.2
5,636,368	+		PfGW456L13_5054	0.56	+11.5
5,636,368	+		PfGW456L13_5054	0.56	+12.1
5,636,368	+		PfGW456L13_5054	0.56	+12.1
5,636,368	+		PfGW456L13_5054	0.56	+11.9
5,636,368	+		PfGW456L13_5054	0.56	+11.8
5,636,368	+		PfGW456L13_5054	0.56	+12.2
5,636,369	-		PfGW456L13_5054	0.56	-0.8
5,636,369	-		PfGW456L13_5054	0.56	-0.3
5,636,369	-		PfGW456L13_5054	0.56	+0.4
5,636,369	-		PfGW456L13_5054	0.56	+0.2
5,636,369	-		PfGW456L13_5054	0.56	+0.3
5,636,369	-		PfGW456L13_5054	0.56	-0.9
5,636,369	-		PfGW456L13_5054	0.56	+0.1
5,636,369	-		PfGW456L13_5054	0.56	-1.1
5,636,369	-		PfGW456L13_5054	0.56	+1.2
5,636,369	-		PfGW456L13_5054	0.56	-0.8
5,636,369	-		PfGW456L13_5054	0.56	+0.7
5,636,369	-		PfGW456L13_5054	0.56	+0.4
5,636,369	-		PfGW456L13_5054	0.56	-1.6
5,636,369	-		PfGW456L13_5054	0.56	-1.2
5,636,369	-		PfGW456L13_5054	0.56	-1.0
5,636,369	-		PfGW456L13_5054	0.56	+0.2
5,636,369	-		PfGW456L13_5054	0.56	-1.0
5,636,369	-		PfGW456L13_5054	0.56	+1.1
5,636,369	-		PfGW456L13_5054	0.56	-1.5
5,636,369	-		PfGW456L13_5054	0.56	-2.0
5,636,370	+		PfGW456L13_5054	0.56	+12.0
5,636,370	+		PfGW456L13_5054	0.56	+11.8
5,636,370	+		PfGW456L13_5054	0.56	+11.5
5,636,370	+		PfGW456L13_5054	0.56	+12.5
5,636,370	+		PfGW456L13_5054	0.56	+11.8
5,636,370	+		PfGW456L13_5054	0.56	+12.0
5,636,370	+		PfGW456L13_5054	0.56	+11.7
5,636,371	-		PfGW456L13_5054	0.56	+0.4
5,636,371	-		PfGW456L13_5054	0.56	-0.5
5,636,371	-		PfGW456L13_5054	0.56	-0.0
5,636,371	-		PfGW456L13_5054	0.56	-1.3
5,636,371	-		PfGW456L13_5054	0.56	-1.1
5,636,371	-		PfGW456L13_5054	0.56	-0.1
5,636,371	-		PfGW456L13_5054	0.56	-0.9
5,636,371	-		PfGW456L13_5054	0.56	-0.7
5,636,371	-		PfGW456L13_5054	0.56	-0.2
5,636,371	-		PfGW456L13_5054	0.56	-1.0
5,636,371	-		PfGW456L13_5054	0.56	-1.1
5,636,425	+		PfGW456L13_5054	0.59	+11.8
5,636,425	+		PfGW456L13_5054	0.59	+11.7
5,636,425	+		PfGW456L13_5054	0.59	+11.8
5,636,425	+		PfGW456L13_5054	0.59	+10.9
5,636,425	+		PfGW456L13_5054	0.59	+11.6
5,636,426	-		PfGW456L13_5054	0.59	-0.3
5,636,426	-		PfGW456L13_5054	0.59	-0.5
5,636,426	-		PfGW456L13_5054	0.59	+0.3
5,636,426	-		PfGW456L13_5054	0.59	-1.4
5,636,426	-		PfGW456L13_5054	0.59	-0.8
5,636,426	-		PfGW456L13_5054	0.59	-0.3
5,636,426	-		PfGW456L13_5054	0.59	+0.2
5,636,426	-		PfGW456L13_5054	0.59	+0.4
5,636,426	-		PfGW456L13_5054	0.59	-0.7
5,636,426	-		PfGW456L13_5054	0.59	-1.5
5,636,426	-		PfGW456L13_5054	0.59	-2.3
5,636,426	-		PfGW456L13_5054	0.59	-2.7
5,636,426	-		PfGW456L13_5054	0.59	-0.8
5,636,426	-		PfGW456L13_5054	0.59	-0.1
5,636,498	-		PfGW456L13_5054	0.64	-0.7
5,636,802	+		PfGW456L13_5054	0.83	+10.8
5,636,803	-		PfGW456L13_5054	0.83	-1.6
5,636,803	-		PfGW456L13_5054	0.83	-2.0
5,636,839	+		PfGW456L13_5054	0.85	+12.0
5,636,940	+				+11.5
5,636,941	-				-0.8
5,636,982	+				+10.6
5,636,982	+				+12.2
5,636,982	+				+11.0
5,636,982	+				+11.6
5,636,982	+				+11.9
5,636,982	+				+11.5
5,636,982	+				+11.1
5,636,982	+				+11.8
5,636,982	+				+11.4
5,636,983	-				-1.9
5,636,983	-				-1.5
5,636,983	-				-0.7
5,637,011	+				+12.2
5,637,011	+				+12.0
5,637,011	+				+11.5
5,637,012	-				-2.2
5,637,012	-				-0.6
5,637,012	-				-0.3
5,637,012	-				-2.7
5,637,012	-				-0.5
5,637,012	-				-0.6
5,637,012	-				-0.2
5,637,027	+				+10.5
5,637,028	-				-1.3
5,637,028	-				-1.5
5,637,045	+				+2.2
5,637,046	-				-0.6
5,637,070	+				+7.1
5,637,070	+				+8.2
5,637,070	+				+12.5
5,637,070	+				+8.1
5,637,070	+				+9.8
5,637,070	+				+3.2
5,637,070	+				+11.2
5,637,070	+				+8.4
5,637,071	-				-2.6
5,637,071	-				-2.3
5,637,071	-				+0.7
5,637,071	-				-0.6
5,637,073	+				+1.6
5,637,074	-				-0.7
5,637,134	+				-1.7
5,637,134	+				-3.0
5,637,134	+				-1.8
5,637,134	+				-1.8
5,637,134	+				-0.7
5,637,135	-				-0.3
5,637,135	-				-1.0
5,637,135	-				-3.3
5,637,135	-				-1.9
5,637,135	-				-1.8
5,637,135	-				-2.6
5,637,135	-				-0.5
5,637,135	-				-1.7
5,637,150	+				-2.9
5,637,150	+				-0.9
5,637,151	-				-1.5
5,637,156	+				-0.9
5,637,156	+				-0.6
5,637,157	-				+0.2
5,637,176	+				-2.7
5,637,176	+				-2.1
5,637,248	+		PfGW456L13_5055	0.10	-0.1
5,637,270	+		PfGW456L13_5055	0.12	+0.1
5,637,270	+		PfGW456L13_5055	0.12	-1.3
5,637,271	-		PfGW456L13_5055	0.12	-1.7
5,637,271	-		PfGW456L13_5055	0.12	-1.9
5,637,271	-		PfGW456L13_5055	0.12	-2.1
5,637,271	-		PfGW456L13_5055	0.12	-2.7
5,637,311	+		PfGW456L13_5055	0.16	-2.6
5,637,332	-		PfGW456L13_5055	0.18	-1.6
5,637,332	-		PfGW456L13_5055	0.18	-1.8
5,637,332	-		PfGW456L13_5055	0.18	-1.2
5,637,349	+		PfGW456L13_5055	0.20	+0.7
5,637,349	+		PfGW456L13_5055	0.20	-1.7
5,637,350	-		PfGW456L13_5055	0.20	-0.2
5,637,566	-		PfGW456L13_5055	0.42	-1.8
5,637,661	+		PfGW456L13_5055	0.51	-0.7
5,637,661	+		PfGW456L13_5055	0.51	-0.8
5,637,661	+		PfGW456L13_5055	0.51	-1.4
5,637,662	-		PfGW456L13_5055	0.51	-1.6
5,637,662	-		PfGW456L13_5055	0.51	-0.3
5,637,662	-		PfGW456L13_5055	0.51	-0.5
5,637,662	-		PfGW456L13_5055	0.51	-2.1
5,637,662	-		PfGW456L13_5055	0.51	-2.5
5,637,841	+		PfGW456L13_5055	0.69	-1.7
5,637,841	+		PfGW456L13_5055	0.69	-3.5
5,637,841	+		PfGW456L13_5055	0.69	+0.7
5,637,842	-		PfGW456L13_5055	0.69	-0.5
5,637,842	-		PfGW456L13_5055	0.69	+0.4
5,637,842	-		PfGW456L13_5055	0.69	-2.3
5,637,842	-		PfGW456L13_5055	0.69	-2.2
5,637,842	-		PfGW456L13_5055	0.69	-0.1
5,637,893	+		PfGW456L13_5055	0.74	+0.3
5,638,043	-		PfGW456L13_5055	0.89	-1.2
5,638,070	+				-0.1