Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4748 and PfGW456L13_4749 are separated by 98 nucleotides PfGW456L13_4749 and PfGW456L13_4750 are separated by 51 nucleotides
PfGW456L13_4748 - Transcriptional regulator, TetR family, at 5,290,796 to 5,291,512
_4748
PfGW456L13_4749 - Lysyl-tRNA synthetase (class II) (EC 6.1.1.6), at 5,291,611 to 5,293,176
_4749
PfGW456L13_4750 - Peptide chain release factor 2; programmed frameshift-containing, at 5,293,228 to 5,294,109
_4750
Position (kb)
5291
5292
5293
5294 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5290.670 kb on + strand at 5290.671 kb on - strand at 5290.671 kb on - strand at 5290.824 kb on + strand at 5290.824 kb on + strand at 5290.824 kb on + strand at 5290.824 kb on + strand at 5290.825 kb on - strand at 5290.825 kb on - strand at 5290.871 kb on + strand, within PfGW456L13_4748 at 5290.871 kb on + strand, within PfGW456L13_4748 at 5290.955 kb on + strand, within PfGW456L13_4748 at 5291.103 kb on + strand, within PfGW456L13_4748 at 5291.103 kb on + strand, within PfGW456L13_4748 at 5291.104 kb on - strand, within PfGW456L13_4748 at 5291.104 kb on - strand, within PfGW456L13_4748 at 5291.125 kb on + strand, within PfGW456L13_4748 at 5291.125 kb on + strand, within PfGW456L13_4748 at 5291.223 kb on + strand, within PfGW456L13_4748 at 5291.223 kb on + strand, within PfGW456L13_4748 at 5291.223 kb on + strand, within PfGW456L13_4748 at 5291.223 kb on + strand, within PfGW456L13_4748 at 5291.223 kb on + strand, within PfGW456L13_4748 at 5291.224 kb on - strand, within PfGW456L13_4748 at 5291.224 kb on - strand, within PfGW456L13_4748 at 5291.224 kb on - strand, within PfGW456L13_4748 at 5291.244 kb on + strand, within PfGW456L13_4748 at 5291.245 kb on - strand, within PfGW456L13_4748 at 5291.245 kb on - strand, within PfGW456L13_4748 at 5291.245 kb on - strand, within PfGW456L13_4748 at 5291.257 kb on + strand, within PfGW456L13_4748 at 5291.279 kb on - strand, within PfGW456L13_4748 at 5291.289 kb on + strand, within PfGW456L13_4748 at 5291.289 kb on + strand, within PfGW456L13_4748 at 5291.289 kb on + strand, within PfGW456L13_4748 at 5291.290 kb on - strand, within PfGW456L13_4748 at 5291.290 kb on - strand, within PfGW456L13_4748 at 5291.292 kb on + strand, within PfGW456L13_4748 at 5291.292 kb on + strand, within PfGW456L13_4748 at 5291.292 kb on + strand, within PfGW456L13_4748 at 5291.293 kb on - strand, within PfGW456L13_4748 at 5291.293 kb on - strand, within PfGW456L13_4748 at 5291.293 kb on - strand, within PfGW456L13_4748 at 5291.445 kb on + strand at 5291.519 kb on + strand at 5291.519 kb on + strand at 5291.519 kb on + strand at 5291.520 kb on - strand at 5291.520 kb on - strand at 5291.539 kb on + strand at 5291.540 kb on - strand at 5291.550 kb on + strand at 5291.550 kb on + strand at 5291.551 kb on - strand at 5291.558 kb on + strand at 5291.572 kb on + strand at 5291.572 kb on + strand at 5291.612 kb on + strand at 5291.612 kb on + strand at 5291.613 kb on - strand at 5291.613 kb on - strand at 5293.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 5,290,670 + -0.4 5,290,671 - +1.0 5,290,671 - -1.4 5,290,824 + +0.9 5,290,824 + +1.4 5,290,824 + +1.2 5,290,824 + +0.5 5,290,825 - -0.4 5,290,825 - +0.6 5,290,871 + PfGW456L13_4748 0.10 +0.4 5,290,871 + PfGW456L13_4748 0.10 +1.2 5,290,955 + PfGW456L13_4748 0.22 -0.4 5,291,103 + PfGW456L13_4748 0.43 -0.3 5,291,103 + PfGW456L13_4748 0.43 -1.3 5,291,104 - PfGW456L13_4748 0.43 -0.6 5,291,104 - PfGW456L13_4748 0.43 +1.5 5,291,125 + PfGW456L13_4748 0.46 +1.7 5,291,125 + PfGW456L13_4748 0.46 +0.2 5,291,223 + PfGW456L13_4748 0.60 +0.8 5,291,223 + PfGW456L13_4748 0.60 +0.2 5,291,223 + PfGW456L13_4748 0.60 +1.6 5,291,223 + PfGW456L13_4748 0.60 +1.2 5,291,223 + PfGW456L13_4748 0.60 +1.4 5,291,224 - PfGW456L13_4748 0.60 -1.0 5,291,224 - PfGW456L13_4748 0.60 +1.4 5,291,224 - PfGW456L13_4748 0.60 +1.7 5,291,244 + PfGW456L13_4748 0.62 +0.4 5,291,245 - PfGW456L13_4748 0.63 +0.7 5,291,245 - PfGW456L13_4748 0.63 +1.0 5,291,245 - PfGW456L13_4748 0.63 +0.9 5,291,257 + PfGW456L13_4748 0.64 +0.9 5,291,279 - PfGW456L13_4748 0.67 -0.3 5,291,289 + PfGW456L13_4748 0.69 +0.8 5,291,289 + PfGW456L13_4748 0.69 +1.2 5,291,289 + PfGW456L13_4748 0.69 +1.6 5,291,290 - PfGW456L13_4748 0.69 +1.5 5,291,290 - PfGW456L13_4748 0.69 +0.6 5,291,292 + PfGW456L13_4748 0.69 +0.3 5,291,292 + PfGW456L13_4748 0.69 +1.4 5,291,292 + PfGW456L13_4748 0.69 +0.9 5,291,293 - PfGW456L13_4748 0.69 +0.4 5,291,293 - PfGW456L13_4748 0.69 +1.0 5,291,293 - PfGW456L13_4748 0.69 -1.3 5,291,445 + +0.0 5,291,519 + +1.4 5,291,519 + +0.4 5,291,519 + +0.4 5,291,520 - -2.6 5,291,520 - +1.4 5,291,539 + +1.6 5,291,540 - -0.8 5,291,550 + +0.8 5,291,550 + +2.5 5,291,551 - -0.6 5,291,558 + +0.9 5,291,572 + +0.9 5,291,572 + -1.1 5,291,612 + -0.1 5,291,612 + +2.9 5,291,613 - -0.7 5,291,613 - -1.4 5,293,124 - -1.4
Or see this region's nucleotide sequence