Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4045

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
4,538,707	+		PfGW456L13_4044	0.63	+1.0
4,538,707	+		PfGW456L13_4044	0.63	-0.0
4,538,707	+		PfGW456L13_4044	0.63	+0.6
4,539,366	-				-0.9
4,539,366	-				+1.2
4,539,440	+				+0.5
4,539,440	+				-0.9
4,539,482	+				+0.2
4,539,483	-				-0.8
4,539,483	-				+0.5
4,539,558	+				+0.6
4,539,558	+				+0.4
4,539,559	-				-0.0
4,539,559	-				+0.7
4,539,563	+				-0.4
4,539,563	+				-0.0
4,539,563	+				+0.8
4,539,563	+				-0.0
4,539,563	+				+0.2
4,539,563	+				-1.6
4,539,563	+				+0.2
4,539,563	+				-0.5
4,539,564	-				-1.8
4,539,564	-				+0.2
4,539,564	-				-1.0
4,539,664	-				-0.9
4,539,722	+				-1.4
4,539,725	+				-0.3
4,539,725	+				+0.0
4,539,725	+				+2.0
4,539,725	+				-0.9
4,539,725	+				-0.0
4,539,726	-				+0.2
4,539,726	-				-0.4
4,539,770	+				-0.6
4,539,770	+				-1.8
4,539,771	-				-0.4
4,539,801	-				-0.2
4,539,815	+				+0.0
4,539,815	+				+0.2
4,539,815	+				+0.4
4,539,816	-				-0.2
4,539,977	+		PfGW456L13_4045	0.18	-1.2
4,539,977	+		PfGW456L13_4045	0.18	-1.4
4,539,977	+		PfGW456L13_4045	0.18	-1.1
4,539,978	-		PfGW456L13_4045	0.18	+0.7
4,539,978	-		PfGW456L13_4045	0.18	+0.1
4,539,978	-		PfGW456L13_4045	0.18	-2.0
4,539,980	+		PfGW456L13_4045	0.18	-1.4
4,539,981	-		PfGW456L13_4045	0.18	+1.0
4,539,981	-		PfGW456L13_4045	0.18	-0.4
4,539,981	-		PfGW456L13_4045	0.18	+0.4
4,539,981	-		PfGW456L13_4045	0.18	-0.3
4,539,981	-		PfGW456L13_4045	0.18	-0.4
4,539,981	-		PfGW456L13_4045	0.18	+0.2
4,539,981	-		PfGW456L13_4045	0.18	+0.4
4,540,028	+		PfGW456L13_4045	0.21	-0.3
4,540,029	-		PfGW456L13_4045	0.21	+0.3
4,540,093	+		PfGW456L13_4045	0.24	+1.8
4,540,205	+		PfGW456L13_4045	0.30	+2.9
4,540,205	+		PfGW456L13_4045	0.30	-0.6
4,540,205	+		PfGW456L13_4045	0.30	+1.1
4,540,205	+		PfGW456L13_4045	0.30	+0.2
4,540,205	+		PfGW456L13_4045	0.30	-0.0
4,540,205	+		PfGW456L13_4045	0.30	+0.2
4,540,205	+		PfGW456L13_4045	0.30	-1.4
4,540,206	-		PfGW456L13_4045	0.30	-1.2
4,540,206	-		PfGW456L13_4045	0.30	-0.9
4,540,523	+		PfGW456L13_4045	0.47	-1.6
4,540,523	+		PfGW456L13_4045	0.47	+0.9
4,540,523	+		PfGW456L13_4045	0.47	-0.2
4,540,524	-		PfGW456L13_4045	0.47	-2.1
4,540,524	-		PfGW456L13_4045	0.47	+0.7
4,540,605	-		PfGW456L13_4045	0.51	-2.3
4,540,749	-		PfGW456L13_4045	0.58	+0.5
4,540,749	-		PfGW456L13_4045	0.58	+0.3
4,540,796	-		PfGW456L13_4045	0.61	-0.2
4,540,854	+		PfGW456L13_4045	0.64	-1.7
4,540,854	+		PfGW456L13_4045	0.64	+0.4
4,540,854	+		PfGW456L13_4045	0.64	-0.6
4,540,854	+		PfGW456L13_4045	0.64	+0.6
4,540,854	+		PfGW456L13_4045	0.64	-0.2
4,540,855	-		PfGW456L13_4045	0.64	-1.7
4,540,855	-		PfGW456L13_4045	0.64	-0.6
4,540,913	+		PfGW456L13_4045	0.67	-0.8
4,540,914	-		PfGW456L13_4045	0.67	+0.3
4,540,970	+		PfGW456L13_4045	0.70	+1.7
4,540,985	+		PfGW456L13_4045	0.70	+0.7
4,541,021	+		PfGW456L13_4045	0.72	+0.4
4,541,021	+		PfGW456L13_4045	0.72	+1.7
4,541,237	+		PfGW456L13_4045	0.84	-0.6
4,541,237	+		PfGW456L13_4045	0.84	+0.2
4,541,239	+		PfGW456L13_4045	0.84	+0.1
4,541,239	+		PfGW456L13_4045	0.84	+0.2
4,541,239	+		PfGW456L13_4045	0.84	+0.4
4,541,240	-		PfGW456L13_4045	0.84	-0.4
4,541,240	-		PfGW456L13_4045	0.84	-0.1
4,541,240	-		PfGW456L13_4045	0.84	-0.7
4,541,351	+		PfGW456L13_4045	0.89	+0.5
4,541,352	-		PfGW456L13_4045	0.89	-2.0
4,541,453	+				-0.4
4,541,453	+				-0.0
4,541,453	+				-0.8
4,541,454	-				+0.4
4,541,454	-				-0.0
4,541,454	-				-0.6
4,541,454	-				-0.9
4,541,454	-				+0.5
4,541,474	+				-0.3
4,541,486	+				-0.7
4,541,486	+				-1.5
4,541,487	-				+0.4
4,541,487	-				+0.3
4,541,487	-				-0.2
4,541,487	-				-0.7
4,541,538	-				-0.8
4,541,538	-				-2.5
4,541,589	+				-1.1
4,541,589	+				+1.0
4,541,589	+				+1.8
4,541,589	+				-0.2
4,541,589	+				+0.7
4,541,590	-				-0.8
4,541,590	-				+0.6
4,541,590	-				-0.2
4,541,590	-				+2.2
4,541,655	+				-0.0
4,541,655	+				+0.5
4,541,656	-				-1.5
4,541,656	-				+0.5
4,541,656	-				-1.4
4,541,715	+				-0.0
4,541,715	+				+2.0
4,541,715	+				+0.7
4,541,715	+				+2.4
4,541,716	-				+1.0
4,541,716	-				+0.1
4,541,716	-				+0.4
4,541,716	-				-0.8
4,541,939	+		PfGW456L13_4046	0.16	+2.2
4,542,043	+		PfGW456L13_4046	0.22	+0.8
4,542,080	+		PfGW456L13_4046	0.24	-1.8
4,542,080	+		PfGW456L13_4046	0.24	+0.4
4,542,080	+		PfGW456L13_4046	0.24	-0.7
4,542,081	-		PfGW456L13_4046	0.24	+0.1
4,542,270	+		PfGW456L13_4046	0.35	+0.1
4,542,270	+		PfGW456L13_4046	0.35	-0.2
4,542,270	+		PfGW456L13_4046	0.35	+0.2
4,542,270	+		PfGW456L13_4046	0.35	+1.0
4,542,270	+		PfGW456L13_4046	0.35	-1.2
4,542,271	-		PfGW456L13_4046	0.35	+0.4
4,542,271	-		PfGW456L13_4046	0.35	-0.4
4,542,271	-		PfGW456L13_4046	0.35	+1.0
4,542,271	-		PfGW456L13_4046	0.35	+0.2
4,542,358	-		PfGW456L13_4046	0.40	+0.9
4,542,358	-		PfGW456L13_4046	0.40	-1.2
4,542,404	+		PfGW456L13_4046	0.42	+0.4
4,542,404	+		PfGW456L13_4046	0.42	+1.7
4,542,404	+		PfGW456L13_4046	0.42	+0.3
4,542,404	+		PfGW456L13_4046	0.42	+0.8
4,542,404	+		PfGW456L13_4046	0.42	-0.8
4,542,404	+		PfGW456L13_4046	0.42	-0.7
4,542,404	+		PfGW456L13_4046	0.42	-1.7
4,542,404	+		PfGW456L13_4046	0.42	-1.3
4,542,404	+		PfGW456L13_4046	0.42	+0.5
4,542,404	+		PfGW456L13_4046	0.42	-0.4
4,542,404	+		PfGW456L13_4046	0.42	+0.4
4,542,405	-		PfGW456L13_4046	0.42	+0.4
4,542,405	-		PfGW456L13_4046	0.42	-0.6
4,542,405	-		PfGW456L13_4046	0.42	+0.1
4,542,405	-		PfGW456L13_4046	0.42	-0.6
4,542,405	-		PfGW456L13_4046	0.42	+0.1
4,542,405	-		PfGW456L13_4046	0.42	-0.1
4,542,405	-		PfGW456L13_4046	0.42	+0.8
4,542,405	-				+2.2