Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4031 and PfGW456L13_4032 overlap by 18 nucleotides PfGW456L13_4032 and PfGW456L13_4033 are separated by 38 nucleotides PfGW456L13_4033 and PfGW456L13_4034 are separated by 229 nucleotides PfGW456L13_4034 and PfGW456L13_4035 are separated by 10 nucleotides
PfGW456L13_4031 - Beta N-acetyl-glucosaminidase (EC 3.2.1.52), at 4,524,892 to 4,525,902
_4031
PfGW456L13_4032 - hypothetical protein, at 4,525,885 to 4,526,022
_4032
PfGW456L13_4033 - Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family, at 4,526,061 to 4,526,768
_4033
PfGW456L13_4034 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 4,526,998 to 4,527,606
_4034
PfGW456L13_4035 - Cell division inhibitor-related protein, at 4,527,617 to 4,528,093
_4035
Position (kb)
4526
4527 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4525.257 kb on - strand, within PfGW456L13_4031 at 4525.616 kb on + strand, within PfGW456L13_4031 at 4525.617 kb on - strand, within PfGW456L13_4031 at 4525.903 kb on - strand, within PfGW456L13_4032 at 4525.956 kb on + strand, within PfGW456L13_4032 at 4525.957 kb on - strand, within PfGW456L13_4032 at 4526.020 kb on + strand at 4526.021 kb on - strand at 4526.319 kb on - strand, within PfGW456L13_4033 at 4526.319 kb on - strand, within PfGW456L13_4033 at 4526.372 kb on - strand, within PfGW456L13_4033 at 4526.445 kb on - strand, within PfGW456L13_4033 at 4526.804 kb on - strand at 4526.866 kb on + strand at 4526.866 kb on + strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.957 kb on - strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.960 kb on + strand at 4526.960 kb on + strand at 4526.997 kb on + strand at 4526.997 kb on + strand at 4527.002 kb on + strand at 4527.708 kb on + strand, within PfGW456L13_4035
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 4,525,257 - PfGW456L13_4031 0.36 -1.0 4,525,616 + PfGW456L13_4031 0.72 +0.4 4,525,617 - PfGW456L13_4031 0.72 +0.2 4,525,903 - PfGW456L13_4032 0.13 +1.2 4,525,956 + PfGW456L13_4032 0.51 -0.6 4,525,957 - PfGW456L13_4032 0.52 +0.7 4,526,020 + -1.2 4,526,021 - +0.8 4,526,319 - PfGW456L13_4033 0.36 +0.5 4,526,319 - PfGW456L13_4033 0.36 -0.5 4,526,372 - PfGW456L13_4033 0.44 +0.2 4,526,445 - PfGW456L13_4033 0.54 -0.3 4,526,804 - +0.1 4,526,866 + -1.4 4,526,866 + -0.5 4,526,867 - +0.5 4,526,867 - -0.1 4,526,867 - -1.0 4,526,867 - -0.4 4,526,867 - +0.3 4,526,957 - +0.4 4,526,958 + +3.5 4,526,958 + -0.6 4,526,958 + -1.3 4,526,958 + -0.6 4,526,960 + -1.7 4,526,960 + -0.0 4,526,997 + -0.6 4,526,997 + -0.2 4,527,002 + -0.7 4,527,708 + PfGW456L13_4035 0.19 -0.4
Or see this region's nucleotide sequence