Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3046

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
3,382,578	+				-1.4
3,382,617	+				+0.9
3,382,617	+				-0.7
3,382,651	-				-1.0
3,382,753	+		PfGW456L13_3045	0.19	-0.9
3,382,779	+		PfGW456L13_3045	0.22	+0.7
3,382,779	+		PfGW456L13_3045	0.22	-0.9
3,382,780	-		PfGW456L13_3045	0.22	-1.5
3,382,780	-		PfGW456L13_3045	0.22	-1.0
3,382,846	-		PfGW456L13_3045	0.30	+1.0
3,382,846	-		PfGW456L13_3045	0.30	-0.5
3,382,914	+		PfGW456L13_3045	0.37	+0.8
3,382,914	+		PfGW456L13_3045	0.37	+0.5
3,382,915	-		PfGW456L13_3045	0.38	+0.5
3,382,915	-		PfGW456L13_3045	0.38	-0.4
3,383,033	+		PfGW456L13_3045	0.51	-0.8
3,383,080	+		PfGW456L13_3045	0.56	-1.1
3,383,081	-		PfGW456L13_3045	0.56	-1.5
3,383,117	-		PfGW456L13_3045	0.60	-0.5
3,383,208	+		PfGW456L13_3045	0.70	+0.6
3,383,208	+		PfGW456L13_3045	0.70	+0.8
3,383,208	+		PfGW456L13_3045	0.70	-0.5
3,383,209	-		PfGW456L13_3045	0.71	-0.2
3,383,366	-		PfGW456L13_3045	0.88	-0.6
3,383,522	+				-0.6
3,383,552	+				-0.2
3,383,552	+				+0.4
3,383,552	+				-0.0
3,383,552	+				+1.0
3,383,552	+				+1.6
3,383,552	+				-0.7
3,383,552	+				+0.5
3,383,552	+				+1.0
3,383,552	+				+0.4
3,383,552	+				-1.0
3,383,552	+				+1.1
3,383,553	-				+1.3
3,383,553	-				-0.5
3,383,553	-				+0.2
3,383,553	-				-1.2
3,383,553	-				+0.4
3,383,553	-				+0.3
3,383,553	-				+0.1
3,383,553	-				-0.5
3,383,553	-				+1.4
3,383,553	-				-0.0
3,383,556	+				+1.0
3,383,556	+				-0.0
3,383,556	+				-2.7
3,383,556	+				+1.3
3,383,556	+				-2.6
3,383,556	+				-0.4
3,383,556	+				+0.8
3,383,556	+				+1.3
3,383,556	+				+0.4
3,383,556	+				-1.4
3,383,556	+				-1.0
3,383,556	+				-1.1
3,383,556	+				-1.0
3,383,556	+				-0.3
3,383,557	-				+0.3
3,383,557	-				+1.3
3,383,557	-				-0.9
3,383,557	-				-1.3
3,383,557	-				+0.3
3,383,557	-				+0.2
3,383,557	-				-0.9
3,383,557	-				-1.3
3,383,557	-				-0.1
3,383,622	+				-0.8
3,383,622	+				-2.4
3,383,622	+				-2.5
3,383,622	+				-0.5
3,383,622	+				+0.6
3,383,622	+				-0.0
3,383,622	+				-0.1
3,383,622	+				-0.8
3,383,622	+				-0.8
3,383,622	+				+0.8
3,383,623	-				+0.7
3,383,623	-				-1.6
3,383,623	-				-0.5
3,383,623	-				+0.7
3,383,623	-				+1.7
3,383,623	-				-0.0
3,383,623	-				+1.2
3,383,623	-				-0.4
3,383,623	-				+0.4
3,383,672	-				+0.7
3,383,672	-				-0.8
3,383,672	-				+0.1
3,383,681	+				+0.0
3,383,681	+				-0.3
3,383,681	+				+0.4
3,383,682	-				+1.0
3,383,682	-				-1.5
3,383,682	-				+0.6
3,383,682	-				+1.7
3,383,682	-				-0.7
3,384,093	+		PfGW456L13_3046	0.40	-2.4
3,384,093	+		PfGW456L13_3046	0.40	-0.5
3,384,093	+		PfGW456L13_3046	0.40	+0.7
3,384,093	+		PfGW456L13_3046	0.40	+1.0
3,384,093	+		PfGW456L13_3046	0.40	-1.5
3,384,093	+		PfGW456L13_3046	0.40	-0.9
3,384,094	-		PfGW456L13_3046	0.40	-0.4
3,384,094	-		PfGW456L13_3046	0.40	+0.5
3,384,102	+		PfGW456L13_3046	0.40	-0.6
3,384,102	+		PfGW456L13_3046	0.40	-0.2
3,384,102	+		PfGW456L13_3046	0.40	+0.5
3,384,102	+		PfGW456L13_3046	0.40	-0.9
3,384,102	+		PfGW456L13_3046	0.40	-0.3
3,384,102	+		PfGW456L13_3046	0.40	-0.3
3,384,102	+		PfGW456L13_3046	0.40	+2.0
3,384,102	+		PfGW456L13_3046	0.40	-0.3
3,384,102	+		PfGW456L13_3046	0.40	-0.5
3,384,102	+		PfGW456L13_3046	0.40	-0.9
3,384,102	+		PfGW456L13_3046	0.40	+1.1
3,384,102	+		PfGW456L13_3046	0.40	+0.3
3,384,102	+		PfGW456L13_3046	0.40	+0.7
3,384,102	+		PfGW456L13_3046	0.40	+0.3
3,384,102	+		PfGW456L13_3046	0.40	-1.1
3,384,102	+		PfGW456L13_3046	0.40	+2.0
3,384,103	-		PfGW456L13_3046	0.41	+0.6
3,384,103	-		PfGW456L13_3046	0.41	+1.3
3,384,103	-		PfGW456L13_3046	0.41	+0.7
3,384,103	-		PfGW456L13_3046	0.41	-0.8
3,384,103	-		PfGW456L13_3046	0.41	-0.2
3,384,103	-		PfGW456L13_3046	0.41	+0.7
3,384,103	-		PfGW456L13_3046	0.41	+0.4
3,384,103	-		PfGW456L13_3046	0.41	-0.4
3,384,103	-		PfGW456L13_3046	0.41	+0.5
3,384,103	-		PfGW456L13_3046	0.41	-0.6
3,384,103	-		PfGW456L13_3046	0.41	-0.3
3,384,103	-		PfGW456L13_3046	0.41	-0.4
3,384,103	-		PfGW456L13_3046	0.41	-1.7
3,384,103	-		PfGW456L13_3046	0.41	-0.5
3,384,103	-		PfGW456L13_3046	0.41	+0.3
3,384,103	-		PfGW456L13_3046	0.41	-0.0
3,384,103	-		PfGW456L13_3046	0.41	-0.0
3,384,103	-		PfGW456L13_3046	0.41	-0.4
3,384,106	+		PfGW456L13_3046	0.41	+1.4
3,384,106	+		PfGW456L13_3046	0.41	+0.2
3,384,106	+		PfGW456L13_3046	0.41	+0.7
3,384,107	-		PfGW456L13_3046	0.41	-0.2
3,384,107	-		PfGW456L13_3046	0.41	+1.0
3,384,107	-		PfGW456L13_3046	0.41	+2.3
3,384,107	-		PfGW456L13_3046	0.41	-0.3
3,384,107	-		PfGW456L13_3046	0.41	+0.1
3,384,107	-		PfGW456L13_3046	0.41	-1.8
3,384,126	-		PfGW456L13_3046	0.42	+0.6
3,384,366	+		PfGW456L13_3046	0.61	+0.1
3,384,680	+		PfGW456L13_3046	0.85	-0.6
3,384,680	+		PfGW456L13_3046	0.85	-0.6
3,384,681	-		PfGW456L13_3046	0.85	+1.3
3,384,681	-		PfGW456L13_3046	0.85	+0.2
3,384,834	+				+0.0
3,384,834	+				-2.4
3,384,835	-				-0.8
3,384,835	-				-0.3
3,384,876	+				+0.3
3,384,877	-				-0.2
3,384,877	-				+1.2
3,384,928	-				-0.1
3,385,027	+		PfGW456L13_3047	0.21	-1.2
3,385,027	+				-0.7
3,385,028	-		PfGW456L13_3047	0.22	-1.2
3,385,028	-		PfGW456L13_3047	0.22	-0.2
3,385,028	-		PfGW456L13_3047	0.22	-0.3
3,385,028	-				+1.7
3,385,082	-		PfGW456L13_3047	0.37	-0.1
3,385,375	+				-0.5
3,385,375	+				-0.7
3,385,375	+				-1.3
3,385,375	+				-1.6
3,385,376	-				-1.4
3,385,376	-				+0.3
3,385,376	-				-1.8
3,385,376	-				+0.5
3,385,376	-				+0.9
3,385,376	-				-1.4
3,385,376	-				+0.4
3,385,376	-				-1.2
3,385,376	-				-1.7
3,385,464	+				-0.0
3,385,464	+				-0.0
3,385,464	+				-0.2
3,385,465	-				-0.7
3,385,465	-				+0.1
3,385,491	+				-0.7
3,385,492	-				-0.0
3,385,492	-				-1.4
3,385,612	+				-0.7
3,385,613	-				-0.6
3,385,613	-				-0.0
3,385,676	+				+1.5
3,385,676	+				-1.2
3,385,677	-				+0.5
3,385,677	-				+0.2
3,385,677	-				+0.4
3,385,677	-				+0.1
3,385,680	+				+0.3
3,385,680	+				-0.1
3,385,680	+				+0.3
3,385,680	+				-1.6
3,385,680	+				+0.7
3,385,681	-				+1.3
3,385,681	-				-2.2
3,385,681	-				+0.7
3,385,681	-				-0.3
3,385,681	-				+0.0
3,385,681	-				+0.5
3,385,869	+				+0.5