Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_301 and PfGW456L13_302 are separated by 81 nucleotides PfGW456L13_302 and PfGW456L13_303 overlap by 8 nucleotides PfGW456L13_303 and PfGW456L13_304 are separated by 25 nucleotides PfGW456L13_304 and PfGW456L13_305 are separated by 10 nucleotides
PfGW456L13_301 - Ubiquinone biosynthesis monooxygenase UbiB, at 351,788 to 353,392
_301
PfGW456L13_302 - Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19), at 353,474 to 353,875
_302
PfGW456L13_303 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) , at 353,868 to 354,200
_303
PfGW456L13_304 - Twin-arginine translocation protein TatA, at 354,226 to 354,498
_304
PfGW456L13_305 - Twin-arginine translocation protein TatB, at 354,509 to 354,952
_305
Position (kb)
353
354 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 353.621 kb on + strand, within PfGW456L13_302 at 353.621 kb on + strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.622 kb on - strand, within PfGW456L13_302 at 353.783 kb on + strand, within PfGW456L13_302 at 353.792 kb on + strand, within PfGW456L13_302 at 353.793 kb on - strand, within PfGW456L13_302 at 353.793 kb on - strand, within PfGW456L13_302 at 353.849 kb on + strand at 353.849 kb on + strand at 353.849 kb on + strand at 353.849 kb on + strand at 353.850 kb on - strand at 353.937 kb on + strand, within PfGW456L13_303 at 353.952 kb on + strand, within PfGW456L13_303 at 353.952 kb on + strand, within PfGW456L13_303 at 354.130 kb on + strand, within PfGW456L13_303 at 354.202 kb on + strand at 354.202 kb on + strand at 354.202 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.206 kb on + strand at 354.209 kb on + strand at 354.209 kb on + strand at 354.507 kb on + strand at 354.507 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 353,621 + PfGW456L13_302 0.37 -1.8 353,621 + PfGW456L13_302 0.37 -1.3 353,622 - PfGW456L13_302 0.37 -1.8 353,622 - PfGW456L13_302 0.37 -2.5 353,622 - PfGW456L13_302 0.37 -1.8 353,622 - PfGW456L13_302 0.37 -0.5 353,622 - PfGW456L13_302 0.37 -2.4 353,622 - PfGW456L13_302 0.37 +1.1 353,783 + PfGW456L13_302 0.77 -2.5 353,792 + PfGW456L13_302 0.79 +0.2 353,793 - PfGW456L13_302 0.79 -1.5 353,793 - PfGW456L13_302 0.79 -0.4 353,849 + +0.7 353,849 + +2.2 353,849 + +0.1 353,849 + +0.3 353,850 - -0.5 353,937 + PfGW456L13_303 0.21 -0.4 353,952 + PfGW456L13_303 0.25 -1.0 353,952 + PfGW456L13_303 0.25 -0.7 354,130 + PfGW456L13_303 0.79 -1.6 354,202 + +1.2 354,202 + +1.2 354,202 + +0.0 354,206 + -1.9 354,206 + -0.1 354,206 + +1.7 354,206 + +1.5 354,206 + -0.0 354,206 + +0.5 354,206 + +1.0 354,209 + -0.3 354,209 + -0.7 354,507 + -0.0 354,507 + +0.2
Or see this region's nucleotide sequence