Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2468 and PfGW456L13_2469 are separated by 77 nucleotides PfGW456L13_2469 and PfGW456L13_2470 are separated by 261 nucleotides PfGW456L13_2470 and PfGW456L13_2471 are separated by 135 nucleotides PfGW456L13_2471 and PfGW456L13_2472 are separated by 279 nucleotides
PfGW456L13_2468 - Putative outer membrane lipoprotein, at 2,737,082 to 2,738,173
_2468
PfGW456L13_2469 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 2,738,251 to 2,738,730
_2469
PfGW456L13_2470 - Uncharacterized GST-like protein yncG, at 2,738,992 to 2,739,615
_2470
PfGW456L13_2471 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 2,739,751 to 2,740,239
_2471
PfGW456L13_2472 - DNA polymerase II (EC 2.7.7.7), at 2,740,519 to 2,742,882
_2472
Position (kb)
2738
2739
2740 Strain fitness (log2 ratio)
-2
-1
0
1 at 2738.194 kb on - strand at 2738.194 kb on - strand at 2738.194 kb on - strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.912 kb on + strand at 2738.913 kb on - strand at 2738.913 kb on - strand at 2738.913 kb on - strand at 2738.913 kb on - strand at 2738.913 kb on - strand at 2738.975 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.991 kb on + strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.992 kb on - strand at 2738.995 kb on + strand at 2739.005 kb on - strand at 2739.280 kb on + strand, within PfGW456L13_2470 at 2739.280 kb on + strand, within PfGW456L13_2470 at 2739.281 kb on - strand, within PfGW456L13_2470 at 2739.281 kb on - strand, within PfGW456L13_2470 at 2739.281 kb on - strand, within PfGW456L13_2470 at 2739.298 kb on + strand, within PfGW456L13_2470 at 2739.299 kb on - strand, within PfGW456L13_2470 at 2739.442 kb on + strand, within PfGW456L13_2470 at 2739.442 kb on + strand, within PfGW456L13_2470 at 2739.443 kb on - strand, within PfGW456L13_2470 at 2739.627 kb on - strand at 2739.627 kb on - strand at 2739.627 kb on - strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.674 kb on + strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.675 kb on - strand at 2739.767 kb on + strand at 2739.767 kb on + strand at 2739.767 kb on + strand at 2739.767 kb on + strand at 2739.768 kb on - strand at 2739.768 kb on - strand at 2739.768 kb on - strand at 2739.768 kb on - strand at 2739.768 kb on - strand at 2740.269 kb on + strand at 2740.269 kb on + strand at 2740.269 kb on + strand at 2740.269 kb on + strand at 2740.269 kb on + strand at 2740.269 kb on + strand at 2740.270 kb on - strand at 2740.393 kb on + strand at 2740.393 kb on + strand at 2740.393 kb on + strand at 2740.393 kb on + strand at 2740.393 kb on + strand at 2740.530 kb on - strand at 2740.530 kb on - strand at 2740.530 kb on - strand at 2740.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 2,738,194 - +0.7 2,738,194 - -1.4 2,738,194 - +0.0 2,738,912 + -0.0 2,738,912 + +0.3 2,738,912 + -1.8 2,738,912 + +0.3 2,738,912 + +1.3 2,738,912 + -1.1 2,738,912 + +0.0 2,738,912 + -0.4 2,738,912 + -1.1 2,738,912 + -0.1 2,738,912 + +0.5 2,738,913 - +0.1 2,738,913 - +0.1 2,738,913 - +0.5 2,738,913 - -0.5 2,738,913 - -0.3 2,738,975 + -0.2 2,738,991 + -0.6 2,738,991 + +0.6 2,738,991 + +0.5 2,738,991 + +0.2 2,738,991 + +0.5 2,738,991 + +0.1 2,738,991 + +0.3 2,738,991 + +0.6 2,738,991 + -0.5 2,738,991 + -1.8 2,738,992 - -0.5 2,738,992 - +0.2 2,738,992 - +0.7 2,738,992 - -1.3 2,738,992 - -1.2 2,738,992 - -1.5 2,738,992 - +1.0 2,738,992 - +0.3 2,738,995 + +0.7 2,739,005 - -1.4 2,739,280 + PfGW456L13_2470 0.46 -1.9 2,739,280 + PfGW456L13_2470 0.46 -1.7 2,739,281 - PfGW456L13_2470 0.46 -0.0 2,739,281 - PfGW456L13_2470 0.46 -0.7 2,739,281 - PfGW456L13_2470 0.46 -0.2 2,739,298 + PfGW456L13_2470 0.49 -1.6 2,739,299 - PfGW456L13_2470 0.49 -0.6 2,739,442 + PfGW456L13_2470 0.72 -0.7 2,739,442 + PfGW456L13_2470 0.72 -2.3 2,739,443 - PfGW456L13_2470 0.72 -0.3 2,739,627 - +0.4 2,739,627 - +1.0 2,739,627 - +0.3 2,739,674 + -1.4 2,739,674 + -0.9 2,739,674 + -0.8 2,739,674 + +1.2 2,739,674 + -0.1 2,739,674 + -0.0 2,739,674 + -0.3 2,739,674 + +0.5 2,739,674 + -1.0 2,739,674 + +0.5 2,739,675 - +0.5 2,739,675 - -0.1 2,739,675 - -0.0 2,739,675 - +1.2 2,739,675 - -0.5 2,739,675 - +0.5 2,739,675 - -0.5 2,739,675 - +0.6 2,739,675 - -0.0 2,739,767 + -1.0 2,739,767 + -0.1 2,739,767 + -0.0 2,739,767 + -0.2 2,739,768 - +0.3 2,739,768 - +0.4 2,739,768 - -0.2 2,739,768 - +1.0 2,739,768 - -1.5 2,740,269 + -0.6 2,740,269 + +0.7 2,740,269 + -0.3 2,740,269 + +0.9 2,740,269 + +1.6 2,740,269 + -0.6 2,740,270 - -0.9 2,740,393 + -0.5 2,740,393 + -1.8 2,740,393 + -0.3 2,740,393 + +0.4 2,740,393 + +0.3 2,740,530 - +0.1 2,740,530 - +0.1 2,740,530 - -1.5 2,740,530 - -0.8
Or see this region's nucleotide sequence