Strain Fitness in Pseudomonas putida KT2440 around PP_0782

Experiment: 2-Piperidinone 3 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Piperidinone 3 vol%
897,979	-				+0.7
898,329	-		PP_0781	0.63	-0.2
898,329	-		PP_0781	0.63	-0.1
898,329	-		PP_0781	0.63	-1.1
898,483	+				-0.2
898,901	-				-0.1
898,935	+				+0.7
898,935	+				-0.5
899,165	+		PP_0782	0.38	-0.8
899,165	+		PP_0782	0.38	-1.1
899,295	+		PP_0782	0.59	-1.2
899,296	-		PP_0782	0.59	+0.4
899,299	+		PP_0782	0.60	-1.6
899,392	+		PP_0782	0.75	-0.3
899,393	-		PP_0782	0.75	-1.2
899,409	-		PP_0782	0.78	-0.2
899,522	+				-0.5
899,523	-				+0.2
899,547	-				+0.5
899,600	+				-0.1
899,601	-				-0.0
899,778	-				-0.5
899,781	+				+1.0
899,781	+				-0.1
899,871	-				-0.3
899,916	+				+2.7
900,008	+		PP_0784	0.19	-0.7
900,036	-		PP_0784	0.23	+1.4
900,128	-		PP_0784	0.38	+1.0
900,131	+		PP_0784	0.39	-0.3
900,215	-		PP_0784	0.52	+0.3
900,323	-		PP_0784	0.70	+0.2
900,357	+		PP_0784	0.75	-1.0
900,358	-		PP_0784	0.76	-0.2
900,453	+				-0.8
900,453	+				-0.6
900,453	+				+0.6
900,453	+				-0.8
900,454	-				-0.3
900,454	-				-1.0
900,454	-				-0.4
900,454	-				-0.7
900,456	+				-0.5
900,488	+				+0.6
900,489	-				+0.6
900,507	-				-0.1