Experiment: m.b. pH6.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1905 and B158DRAFT_1906 are separated by 14 nucleotides B158DRAFT_1906 and B158DRAFT_1907 are separated by 118 nucleotides B158DRAFT_1907 and B158DRAFT_1908 are separated by 138 nucleotides
B158DRAFT_1905: B158DRAFT_1905 - cation diffusion facilitator family transporter, at 41,396 to 42,322
_1905
B158DRAFT_1906: B158DRAFT_1906 - Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 42,337 to 42,894
_1906
B158DRAFT_1907: B158DRAFT_1907 - Uncharacterized protein conserved in bacteria, at 43,013 to 43,621
_1907
B158DRAFT_1908: B158DRAFT_1908 - Glycine/serine hydroxymethyltransferase, at 43,760 to 45,013
_1908
Position (kb) 43
44 Strain fitness (log2 ratio) -2
-1
0
1 at 42.057 kb on - strand, within B158DRAFT_1905 at 42.057 kb on - strand, within B158DRAFT_1905 at 42.089 kb on + strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.097 kb on - strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.109 kb on + strand, within B158DRAFT_1905 at 42.117 kb on - strand, within B158DRAFT_1905 at 42.135 kb on + strand, within B158DRAFT_1905 at 42.143 kb on - strand, within B158DRAFT_1905 at 42.153 kb on - strand, within B158DRAFT_1905 at 42.181 kb on + strand, within B158DRAFT_1905 at 42.189 kb on - strand, within B158DRAFT_1905 at 42.304 kb on - strand at 42.306 kb on + strand at 42.314 kb on - strand at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.425 kb on + strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.433 kb on - strand, within B158DRAFT_1906 at 42.454 kb on - strand, within B158DRAFT_1906 at 42.470 kb on + strand, within B158DRAFT_1906 at 42.493 kb on + strand, within B158DRAFT_1906 at 42.549 kb on + strand, within B158DRAFT_1906 at 42.550 kb on - strand, within B158DRAFT_1906 at 42.557 kb on - strand, within B158DRAFT_1906 at 42.567 kb on + strand, within B158DRAFT_1906 at 42.588 kb on + strand, within B158DRAFT_1906 at 42.596 kb on - strand, within B158DRAFT_1906 at 42.608 kb on - strand, within B158DRAFT_1906 at 42.639 kb on + strand, within B158DRAFT_1906 at 42.642 kb on - strand, within B158DRAFT_1906 at 42.642 kb on - strand, within B158DRAFT_1906 at 42.730 kb on - strand, within B158DRAFT_1906 at 42.827 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.835 kb on + strand, within B158DRAFT_1906 at 42.840 kb on + strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.890 kb on - strand at 43.011 kb on - strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.064 kb on + strand at 43.072 kb on - strand at 43.072 kb on - strand at 43.082 kb on - strand, within B158DRAFT_1907 at 43.113 kb on - strand, within B158DRAFT_1907 at 43.129 kb on + strand, within B158DRAFT_1907 at 43.160 kb on - strand, within B158DRAFT_1907 at 43.170 kb on - strand, within B158DRAFT_1907 at 43.236 kb on - strand, within B158DRAFT_1907 at 43.287 kb on - strand, within B158DRAFT_1907 at 43.324 kb on - strand, within B158DRAFT_1907 at 43.429 kb on - strand, within B158DRAFT_1907 at 43.454 kb on - strand, within B158DRAFT_1907 at 43.458 kb on + strand, within B158DRAFT_1907 at 43.461 kb on - strand, within B158DRAFT_1907 at 43.483 kb on - strand, within B158DRAFT_1907 at 43.507 kb on + strand, within B158DRAFT_1907 at 43.513 kb on + strand, within B158DRAFT_1907 at 43.516 kb on - strand, within B158DRAFT_1907 at 43.539 kb on + strand, within B158DRAFT_1907 at 43.548 kb on - strand, within B158DRAFT_1907 at 43.549 kb on - strand, within B158DRAFT_1907 at 43.554 kb on - strand, within B158DRAFT_1907 at 43.563 kb on + strand at 43.568 kb on + strand at 43.568 kb on + strand at 43.576 kb on - strand at 43.576 kb on - strand at 43.615 kb on + strand at 43.623 kb on - strand at 43.643 kb on - strand at 43.690 kb on + strand at 43.690 kb on + strand at 43.698 kb on - strand at 43.698 kb on - strand at 43.750 kb on + strand at 43.765 kb on + strand at 43.765 kb on + strand at 43.765 kb on + strand at 43.773 kb on - strand at 43.773 kb on - strand at 43.845 kb on + strand at 43.853 kb on - strand at 43.895 kb on + strand, within B158DRAFT_1908 at 43.902 kb on + strand, within B158DRAFT_1908 at 43.902 kb on + strand, within B158DRAFT_1908 at 43.902 kb on + strand, within B158DRAFT_1908 at 43.907 kb on + strand, within B158DRAFT_1908 at 43.910 kb on - strand, within B158DRAFT_1908 at 43.915 kb on - strand, within B158DRAFT_1908 at 43.930 kb on + strand, within B158DRAFT_1908 at 43.945 kb on + strand, within B158DRAFT_1908 at 43.975 kb on - strand, within B158DRAFT_1908 at 44.022 kb on - strand, within B158DRAFT_1908 at 44.032 kb on - strand, within B158DRAFT_1908 at 44.043 kb on - strand, within B158DRAFT_1908 at 44.055 kb on - strand, within B158DRAFT_1908 at 44.069 kb on + strand, within B158DRAFT_1908 at 44.080 kb on - strand, within B158DRAFT_1908 at 44.080 kb on - strand, within B158DRAFT_1908 at 44.081 kb on + strand, within B158DRAFT_1908 at 44.086 kb on + strand, within B158DRAFT_1908 at 44.086 kb on + strand, within B158DRAFT_1908 at 44.086 kb on + strand, within B158DRAFT_1908 at 44.094 kb on - strand, within B158DRAFT_1908 at 44.094 kb on - strand, within B158DRAFT_1908 at 44.122 kb on + strand, within B158DRAFT_1908 at 44.124 kb on - strand, within B158DRAFT_1908 at 44.130 kb on - strand, within B158DRAFT_1908 at 44.130 kb on - strand, within B158DRAFT_1908 at 44.201 kb on + strand, within B158DRAFT_1908 at 44.215 kb on + strand, within B158DRAFT_1908 at 44.231 kb on + strand, within B158DRAFT_1908 at 44.238 kb on + strand, within B158DRAFT_1908 at 44.239 kb on - strand, within B158DRAFT_1908 at 44.239 kb on - strand, within B158DRAFT_1908 at 44.285 kb on + strand, within B158DRAFT_1908 at 44.292 kb on + strand, within B158DRAFT_1908 at 44.375 kb on + strand, within B158DRAFT_1908 at 44.375 kb on + strand, within B158DRAFT_1908 at 44.383 kb on - strand, within B158DRAFT_1908 at 44.397 kb on + strand, within B158DRAFT_1908 at 44.499 kb on - strand, within B158DRAFT_1908 at 44.517 kb on - strand, within B158DRAFT_1908 at 44.542 kb on - strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.605 kb on + strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908 at 44.613 kb on - strand, within B158DRAFT_1908
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. pH6.5 remove 42,057 - B158DRAFT_1905 0.71 +0.7 42,057 - B158DRAFT_1905 0.71 +0.0 42,089 + B158DRAFT_1905 0.75 -0.2 42,097 - B158DRAFT_1905 0.76 -0.4 42,097 - B158DRAFT_1905 0.76 -0.3 42,097 - B158DRAFT_1905 0.76 -0.7 42,097 - B158DRAFT_1905 0.76 -0.3 42,097 - B158DRAFT_1905 0.76 +0.0 42,109 + B158DRAFT_1905 0.77 +0.0 42,109 + B158DRAFT_1905 0.77 +0.7 42,109 + B158DRAFT_1905 0.77 -0.6 42,117 - B158DRAFT_1905 0.78 -0.5 42,135 + B158DRAFT_1905 0.80 -0.1 42,143 - B158DRAFT_1905 0.81 -0.3 42,153 - B158DRAFT_1905 0.82 -0.1 42,181 + B158DRAFT_1905 0.85 -0.1 42,189 - B158DRAFT_1905 0.86 +0.1 42,304 - +0.3 42,306 + +0.2 42,314 - -0.9 42,425 + B158DRAFT_1906 0.16 -0.1 42,425 + B158DRAFT_1906 0.16 -0.6 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.2 42,425 + B158DRAFT_1906 0.16 -0.6 42,425 + B158DRAFT_1906 0.16 -0.4 42,425 + B158DRAFT_1906 0.16 -0.8 42,425 + B158DRAFT_1906 0.16 +0.2 42,425 + B158DRAFT_1906 0.16 -0.1 42,425 + B158DRAFT_1906 0.16 -0.1 42,425 + B158DRAFT_1906 0.16 -0.1 42,425 + B158DRAFT_1906 0.16 -0.1 42,433 - B158DRAFT_1906 0.17 +0.0 42,433 - B158DRAFT_1906 0.17 -0.1 42,433 - B158DRAFT_1906 0.17 -0.7 42,433 - B158DRAFT_1906 0.17 -0.2 42,433 - B158DRAFT_1906 0.17 -0.1 42,433 - B158DRAFT_1906 0.17 +0.3 42,433 - B158DRAFT_1906 0.17 +0.2 42,433 - B158DRAFT_1906 0.17 +0.2 42,454 - B158DRAFT_1906 0.21 -0.3 42,470 + B158DRAFT_1906 0.24 -0.0 42,493 + B158DRAFT_1906 0.28 +0.2 42,549 + B158DRAFT_1906 0.38 -0.6 42,550 - B158DRAFT_1906 0.38 +0.2 42,557 - B158DRAFT_1906 0.39 -0.1 42,567 + B158DRAFT_1906 0.41 -0.2 42,588 + B158DRAFT_1906 0.45 -0.2 42,596 - B158DRAFT_1906 0.46 -0.4 42,608 - B158DRAFT_1906 0.49 -0.2 42,639 + B158DRAFT_1906 0.54 -0.6 42,642 - B158DRAFT_1906 0.55 -1.0 42,642 - B158DRAFT_1906 0.55 -0.5 42,730 - B158DRAFT_1906 0.70 -0.3 42,827 + B158DRAFT_1906 0.88 -0.2 42,835 + B158DRAFT_1906 0.89 -0.1 42,835 + B158DRAFT_1906 0.89 -0.1 42,835 + B158DRAFT_1906 0.89 +0.1 42,840 + -0.4 42,843 - -0.2 42,843 - -0.1 42,890 - +0.1 43,011 - -0.1 43,064 + -0.1 43,064 + -0.7 43,064 + -0.1 43,064 + -0.2 43,064 + +0.1 43,072 - +0.0 43,072 - -0.4 43,082 - B158DRAFT_1907 0.11 +0.3 43,113 - B158DRAFT_1907 0.16 -0.4 43,129 + B158DRAFT_1907 0.19 -0.8 43,160 - B158DRAFT_1907 0.24 -0.1 43,170 - B158DRAFT_1907 0.26 -0.3 43,236 - B158DRAFT_1907 0.37 -0.4 43,287 - B158DRAFT_1907 0.45 +0.3 43,324 - B158DRAFT_1907 0.51 -0.2 43,429 - B158DRAFT_1907 0.68 -0.7 43,454 - B158DRAFT_1907 0.72 +0.0 43,458 + B158DRAFT_1907 0.73 -0.2 43,461 - B158DRAFT_1907 0.74 +0.0 43,483 - B158DRAFT_1907 0.77 -0.2 43,507 + B158DRAFT_1907 0.81 +0.0 43,513 + B158DRAFT_1907 0.82 -0.7 43,516 - B158DRAFT_1907 0.83 -0.1 43,539 + B158DRAFT_1907 0.86 -0.0 43,548 - B158DRAFT_1907 0.88 +0.0 43,549 - B158DRAFT_1907 0.88 -0.3 43,554 - B158DRAFT_1907 0.89 -0.6 43,563 + +0.9 43,568 + +0.0 43,568 + -0.7 43,576 - -0.2 43,576 - -0.4 43,615 + -0.3 43,623 - -0.2 43,643 - +0.6 43,690 + -0.5 43,690 + -0.4 43,698 - -0.3 43,698 - -0.8 43,750 + -0.5 43,765 + -1.2 43,765 + -0.9 43,765 + -0.8 43,773 - -0.4 43,773 - -0.7 43,845 + -1.0 43,853 - -0.7 43,895 + B158DRAFT_1908 0.11 -1.2 43,902 + B158DRAFT_1908 0.11 -0.2 43,902 + B158DRAFT_1908 0.11 -0.6 43,902 + B158DRAFT_1908 0.11 -0.5 43,907 + B158DRAFT_1908 0.12 -0.5 43,910 - B158DRAFT_1908 0.12 -1.4 43,915 - B158DRAFT_1908 0.12 -1.3 43,930 + B158DRAFT_1908 0.14 -1.1 43,945 + B158DRAFT_1908 0.15 -1.0 43,975 - B158DRAFT_1908 0.17 -1.3 44,022 - B158DRAFT_1908 0.21 +0.0 44,032 - B158DRAFT_1908 0.22 -1.0 44,043 - B158DRAFT_1908 0.23 -1.3 44,055 - B158DRAFT_1908 0.24 -2.0 44,069 + B158DRAFT_1908 0.25 -1.3 44,080 - B158DRAFT_1908 0.26 -0.9 44,080 - B158DRAFT_1908 0.26 -1.4 44,081 + B158DRAFT_1908 0.26 -0.6 44,086 + B158DRAFT_1908 0.26 -1.2 44,086 + B158DRAFT_1908 0.26 -0.5 44,086 + B158DRAFT_1908 0.26 +0.2 44,094 - B158DRAFT_1908 0.27 -0.9 44,094 - B158DRAFT_1908 0.27 -1.1 44,122 + B158DRAFT_1908 0.29 -0.3 44,124 - B158DRAFT_1908 0.29 -1.8 44,130 - B158DRAFT_1908 0.30 -1.0 44,130 - B158DRAFT_1908 0.30 -1.0 44,201 + B158DRAFT_1908 0.35 -2.6 44,215 + B158DRAFT_1908 0.36 -0.4 44,231 + B158DRAFT_1908 0.38 -0.8 44,238 + B158DRAFT_1908 0.38 -0.6 44,239 - B158DRAFT_1908 0.38 -1.1 44,239 - B158DRAFT_1908 0.38 -0.8 44,285 + B158DRAFT_1908 0.42 -0.8 44,292 + B158DRAFT_1908 0.42 -0.9 44,375 + B158DRAFT_1908 0.49 +0.1 44,375 + B158DRAFT_1908 0.49 -0.8 44,383 - B158DRAFT_1908 0.50 -0.8 44,397 + B158DRAFT_1908 0.51 -1.2 44,499 - B158DRAFT_1908 0.59 -0.9 44,517 - B158DRAFT_1908 0.60 -0.7 44,542 - B158DRAFT_1908 0.62 -0.8 44,605 + B158DRAFT_1908 0.67 -0.4 44,605 + B158DRAFT_1908 0.67 -2.4 44,605 + B158DRAFT_1908 0.67 -1.1 44,605 + B158DRAFT_1908 0.67 -1.5 44,605 + B158DRAFT_1908 0.67 -1.2 44,605 + B158DRAFT_1908 0.67 -0.5 44,605 + B158DRAFT_1908 0.67 -0.2 44,605 + B158DRAFT_1908 0.67 -1.0 44,605 + B158DRAFT_1908 0.67 -1.6 44,605 + B158DRAFT_1908 0.67 -0.2 44,605 + B158DRAFT_1908 0.67 -0.8 44,605 + B158DRAFT_1908 0.67 -1.0 44,605 + B158DRAFT_1908 0.67 -0.6 44,613 - B158DRAFT_1908 0.68 -0.6 44,613 - B158DRAFT_1908 0.68 -1.3 44,613 - B158DRAFT_1908 0.68 -0.7 44,613 - B158DRAFT_1908 0.68 -1.2 44,613 - B158DRAFT_1908 0.68 -0.8 44,613 - B158DRAFT_1908 0.68 -1.3 44,613 - B158DRAFT_1908 0.68 -1.2 44,613 - B158DRAFT_1908 0.68 -0.6 44,613 - B158DRAFT_1908 0.68 -1.3 44,613 - B158DRAFT_1908 0.68 -1.7
Or see this region's nucleotide sequence