Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_495 and PfGW456L13_5162 are separated by 348 nucleotides PfGW456L13_5162 and PfGW456L13_496 are separated by 817 nucleotides
PfGW456L13_495 - Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) <small>(from data)</small>, at 566,952 to 568,394
_495
PfGW456L13_5162 - tRNA-Arg-CCG, at 568,743 to 568,816
_5162
PfGW456L13_496 - hypothetical protein, at 569,634 to 569,900
_496
Position (kb) 568
569 Strain fitness (log2 ratio) -2
-1
0
1
2 at 567.900 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.016 kb on - strand, within PfGW456L13_495 at 568.064 kb on - strand, within PfGW456L13_495 at 568.064 kb on - strand, within PfGW456L13_495 at 568.156 kb on + strand, within PfGW456L13_495 at 568.156 kb on + strand, within PfGW456L13_495 at 568.157 kb on - strand, within PfGW456L13_495 at 568.385 kb on + strand at 568.385 kb on + strand at 568.386 kb on - strand at 568.386 kb on - strand at 568.437 kb on + strand at 568.437 kb on + strand at 568.437 kb on + strand at 568.437 kb on + strand at 568.437 kb on + strand at 568.437 kb on + strand at 568.438 kb on - strand at 568.438 kb on - strand at 568.438 kb on - strand at 568.438 kb on - strand at 568.438 kb on - strand at 568.438 kb on - strand at 568.445 kb on + strand at 568.445 kb on + strand at 568.445 kb on + strand at 568.446 kb on - strand at 568.446 kb on - strand at 568.446 kb on - strand at 568.461 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.502 kb on + strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.503 kb on - strand at 568.506 kb on + strand at 568.588 kb on + strand at 568.588 kb on + strand at 568.589 kb on - strand at 568.657 kb on - strand at 568.657 kb on - strand at 568.657 kb on - strand at 568.670 kb on + strand at 568.721 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.824 kb on + strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.825 kb on - strand at 568.828 kb on + strand at 568.828 kb on + strand at 568.828 kb on + strand at 568.828 kb on + strand at 568.828 kb on + strand at 568.829 kb on - strand at 568.829 kb on - strand at 568.848 kb on + strand at 568.848 kb on + strand at 568.849 kb on - strand at 569.001 kb on + strand at 569.002 kb on - strand at 569.067 kb on + strand at 569.067 kb on + strand at 569.067 kb on + strand at 569.068 kb on - strand at 569.068 kb on - strand at 569.068 kb on - strand at 569.068 kb on - strand at 569.073 kb on + strand at 569.083 kb on + strand at 569.083 kb on + strand at 569.083 kb on + strand at 569.084 kb on - strand at 569.087 kb on + strand at 569.087 kb on + strand at 569.130 kb on - strand at 569.171 kb on + strand at 569.171 kb on + strand at 569.171 kb on + strand at 569.171 kb on + strand at 569.171 kb on + strand at 569.199 kb on + strand at 569.199 kb on + strand at 569.199 kb on + strand at 569.199 kb on + strand at 569.199 kb on + strand at 569.200 kb on - strand at 569.200 kb on - strand at 569.200 kb on - strand at 569.206 kb on + strand at 569.206 kb on + strand at 569.207 kb on - strand at 569.207 kb on - strand at 569.218 kb on + strand at 569.252 kb on + strand at 569.253 kb on - strand at 569.253 kb on - strand at 569.352 kb on + strand at 569.353 kb on - strand at 569.400 kb on + strand at 569.411 kb on + strand at 569.411 kb on + strand at 569.411 kb on + strand at 569.412 kb on - strand at 569.468 kb on - strand at 569.536 kb on + strand at 569.536 kb on + strand at 569.536 kb on + strand at 569.537 kb on - strand at 569.537 kb on - strand at 569.537 kb on - strand at 569.537 kb on - strand at 569.550 kb on + strand at 569.550 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.641 kb on + strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.642 kb on - strand at 569.643 kb on + strand at 569.643 kb on + strand at 569.643 kb on + strand at 569.643 kb on + strand at 569.643 kb on + strand at 569.643 kb on + strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.644 kb on - strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.645 kb on + strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.646 kb on - strand at 569.682 kb on + strand, within PfGW456L13_496 at 569.683 kb on - strand, within PfGW456L13_496 at 569.683 kb on - strand, within PfGW456L13_496 at 569.727 kb on - strand, within PfGW456L13_496 at 569.727 kb on - strand, within PfGW456L13_496 at 569.727 kb on - strand, within PfGW456L13_496 at 569.727 kb on - strand, within PfGW456L13_496 at 569.729 kb on + strand, within PfGW456L13_496 at 569.729 kb on + strand, within PfGW456L13_496 at 569.796 kb on + strand, within PfGW456L13_496
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 567,900 - PfGW456L13_495 0.66 -2.0 568,016 - PfGW456L13_495 0.74 -0.7 568,016 - PfGW456L13_495 0.74 -0.9 568,016 - PfGW456L13_495 0.74 +1.4 568,016 - PfGW456L13_495 0.74 -0.1 568,016 - PfGW456L13_495 0.74 +2.1 568,016 - PfGW456L13_495 0.74 -0.6 568,016 - PfGW456L13_495 0.74 +0.0 568,016 - PfGW456L13_495 0.74 +0.7 568,064 - PfGW456L13_495 0.77 +1.1 568,064 - PfGW456L13_495 0.77 -0.2 568,156 + PfGW456L13_495 0.83 -0.7 568,156 + PfGW456L13_495 0.83 -0.5 568,157 - PfGW456L13_495 0.84 +0.6 568,385 + -0.1 568,385 + +0.1 568,386 - +0.2 568,386 - +0.3 568,437 + -0.2 568,437 + -0.4 568,437 + +0.1 568,437 + -0.3 568,437 + -0.3 568,437 + -2.6 568,438 - -0.6 568,438 - -0.4 568,438 - +0.7 568,438 - +0.3 568,438 - -0.5 568,438 - -1.7 568,445 + -0.8 568,445 + +0.4 568,445 + -0.4 568,446 - +0.5 568,446 - -0.7 568,446 - -0.3 568,461 + -0.0 568,502 + -0.2 568,502 + -0.9 568,502 + +0.8 568,502 + -0.7 568,502 + +0.3 568,502 + +0.9 568,502 + +0.0 568,502 + -1.1 568,502 + -1.9 568,502 + -0.4 568,503 - -0.9 568,503 - -0.6 568,503 - +0.7 568,503 - -1.1 568,503 - +0.1 568,503 - +0.1 568,503 - -0.5 568,503 - +0.2 568,503 - +0.3 568,503 - +0.5 568,503 - -1.5 568,503 - -0.3 568,506 + -1.9 568,588 + -0.6 568,588 + +1.0 568,589 - -1.2 568,657 - -0.8 568,657 - +0.1 568,657 - -1.0 568,670 + +0.2 568,721 + +0.0 568,824 + -0.4 568,824 + -0.8 568,824 + +0.6 568,824 + +0.2 568,824 + +1.4 568,824 + -0.3 568,824 + -0.8 568,824 + -0.2 568,824 + +0.6 568,824 + -0.5 568,824 + -0.1 568,824 + +1.2 568,824 + +0.1 568,824 + -0.4 568,824 + +0.6 568,824 + -0.0 568,824 + +0.4 568,824 + -0.7 568,824 + +1.5 568,824 + +0.7 568,824 + -1.1 568,824 + -0.1 568,824 + -1.9 568,824 + +0.2 568,824 + -0.0 568,824 + -0.1 568,824 + +0.1 568,825 - -0.1 568,825 - -0.0 568,825 - +0.5 568,825 - -0.2 568,825 - +0.8 568,825 - -0.1 568,825 - +0.2 568,825 - -1.1 568,825 - +0.1 568,825 - +1.2 568,825 - +0.9 568,825 - +0.5 568,825 - +0.3 568,825 - -1.9 568,825 - -0.2 568,825 - +1.5 568,825 - +0.2 568,825 - +0.3 568,828 + -0.8 568,828 + -1.3 568,828 + -0.1 568,828 + -0.4 568,828 + -0.9 568,829 - +0.4 568,829 - +0.7 568,848 + +0.0 568,848 + +0.1 568,849 - -0.5 569,001 + -0.9 569,002 - -1.0 569,067 + -0.7 569,067 + -0.9 569,067 + -0.2 569,068 - -0.3 569,068 - +0.6 569,068 - +0.4 569,068 - -1.1 569,073 + -0.4 569,083 + -0.5 569,083 + +0.3 569,083 + -0.4 569,084 - -0.2 569,087 + +0.0 569,087 + +0.8 569,130 - -0.3 569,171 + +1.2 569,171 + -1.8 569,171 + -0.4 569,171 + +0.2 569,171 + -0.0 569,199 + +0.7 569,199 + -0.6 569,199 + +0.5 569,199 + +2.5 569,199 + -0.6 569,200 - +0.1 569,200 - -0.2 569,200 - +0.8 569,206 + -0.8 569,206 + -0.0 569,207 - +1.1 569,207 - +0.9 569,218 + -1.1 569,252 + -1.3 569,253 - -0.0 569,253 - -0.8 569,352 + +0.1 569,353 - -1.0 569,400 + -0.9 569,411 + +0.7 569,411 + +0.9 569,411 + +0.7 569,412 - -0.4 569,468 - -0.1 569,536 + +0.7 569,536 + +0.4 569,536 + +0.0 569,537 - +0.5 569,537 - +0.9 569,537 - +0.3 569,537 - +0.2 569,550 + +0.1 569,550 + +0.7 569,641 + -1.4 569,641 + -1.1 569,641 + +0.6 569,641 + +0.4 569,641 + +0.5 569,641 + +0.1 569,641 + -0.1 569,641 + +0.1 569,641 + -0.0 569,641 + +0.1 569,641 + -1.6 569,641 + -1.3 569,641 + +0.1 569,641 + +0.5 569,641 + -0.3 569,641 + +0.2 569,641 + -0.9 569,641 + +0.7 569,641 + -0.4 569,642 - -0.3 569,642 - +0.8 569,642 - -0.3 569,642 - -0.6 569,642 - +0.1 569,642 - -0.1 569,642 - -0.2 569,642 - +1.4 569,642 - +0.7 569,642 - -2.3 569,642 - +0.5 569,642 - -0.3 569,642 - -0.2 569,642 - -0.2 569,642 - +0.1 569,642 - +0.1 569,642 - +0.2 569,642 - -0.3 569,642 - -1.1 569,642 - +1.1 569,642 - +2.4 569,642 - -1.1 569,642 - -1.0 569,642 - -0.2 569,642 - -0.8 569,642 - +0.8 569,642 - -0.5 569,643 + +1.4 569,643 + -0.3 569,643 + +0.5 569,643 + -0.3 569,643 + +0.1 569,643 + -0.7 569,644 - -0.6 569,644 - -0.6 569,644 - -0.1 569,644 - -0.4 569,644 - +0.4 569,644 - +1.0 569,644 - -0.0 569,644 - +1.2 569,644 - +0.2 569,645 + -0.5 569,645 + +0.9 569,645 + -0.4 569,645 + -0.1 569,645 + +0.8 569,645 + -0.6 569,645 + -0.2 569,645 + +0.7 569,645 + +0.3 569,645 + +0.4 569,645 + -0.3 569,645 + +0.3 569,645 + +0.0 569,645 + +0.2 569,645 + +0.2 569,645 + -0.5 569,645 + -0.8 569,645 + +0.2 569,645 + +0.8 569,645 + -0.1 569,645 + -0.3 569,645 + +0.2 569,645 + -0.8 569,646 - -0.9 569,646 - -0.1 569,646 - +0.6 569,646 - -0.1 569,646 - +0.7 569,646 - -0.4 569,646 - +0.2 569,646 - +0.9 569,646 - -1.4 569,646 - +0.3 569,646 - +1.1 569,646 - +0.5 569,646 - +0.7 569,646 - +0.5 569,646 - +0.4 569,646 - -0.2 569,646 - -0.4 569,646 - +1.0 569,646 - +0.9 569,646 - -1.4 569,682 + PfGW456L13_496 0.18 -0.8 569,683 - PfGW456L13_496 0.18 +0.5 569,683 - PfGW456L13_496 0.18 -0.6 569,727 - PfGW456L13_496 0.35 -2.2 569,727 - PfGW456L13_496 0.35 -0.9 569,727 - PfGW456L13_496 0.35 +0.1 569,727 - PfGW456L13_496 0.35 +0.8 569,729 + PfGW456L13_496 0.36 -1.2 569,729 + PfGW456L13_496 0.36 +0.4 569,796 + PfGW456L13_496 0.61 -0.4
Or see this region's nucleotide sequence