Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4188

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
4,698,550	+		PfGW456L13_4187	0.27	+0.5
4,698,550	+		PfGW456L13_4187	0.27	+0.1
4,698,550	+		PfGW456L13_4187	0.27	+0.4
4,698,550	+		PfGW456L13_4187	0.27	-1.3
4,698,551	-		PfGW456L13_4187	0.27	+1.4
4,698,551	-		PfGW456L13_4187	0.27	+0.4
4,698,551	-		PfGW456L13_4187	0.27	+0.9
4,698,553	+		PfGW456L13_4187	0.27	+1.1
4,698,553	+		PfGW456L13_4187	0.27	+0.7
4,698,553	+		PfGW456L13_4187	0.27	-0.0
4,698,553	+		PfGW456L13_4187	0.27	-1.1
4,698,553	+		PfGW456L13_4187	0.27	-0.8
4,698,553	+		PfGW456L13_4187	0.27	-0.5
4,698,554	-		PfGW456L13_4187	0.28	-1.1
4,698,554	-		PfGW456L13_4187	0.28	-0.5
4,698,554	-		PfGW456L13_4187	0.28	+0.1
4,698,554	-		PfGW456L13_4187	0.28	+1.4
4,698,554	-		PfGW456L13_4187	0.28	+0.3
4,698,554	-		PfGW456L13_4187	0.28	-0.2
4,698,554	-		PfGW456L13_4187	0.28	-0.0
4,698,554	-		PfGW456L13_4187	0.28	-0.2
4,698,592	+		PfGW456L13_4187	0.32	+0.4
4,698,592	+		PfGW456L13_4187	0.32	+0.1
4,698,592	+		PfGW456L13_4187	0.32	+0.1
4,698,593	-		PfGW456L13_4187	0.33	+2.4
4,698,593	-		PfGW456L13_4187	0.33	+0.3
4,698,595	+		PfGW456L13_4187	0.33	+0.8
4,698,688	+		PfGW456L13_4187	0.45	+1.1
4,698,688	+		PfGW456L13_4187	0.45	+0.1
4,698,689	-		PfGW456L13_4187	0.45	-0.4
4,698,689	-		PfGW456L13_4187	0.45	-0.2
4,698,689	-		PfGW456L13_4187	0.45	+0.6
4,698,719	-		PfGW456L13_4187	0.49	+0.6
4,698,781	+		PfGW456L13_4187	0.56	-0.8
4,698,781	+		PfGW456L13_4187	0.56	+0.3
4,698,781	+		PfGW456L13_4187	0.56	-0.5
4,698,781	+		PfGW456L13_4187	0.56	-0.1
4,698,782	-		PfGW456L13_4187	0.57	-0.1
4,698,782	-		PfGW456L13_4187	0.57	+0.6
4,698,782	-		PfGW456L13_4187	0.57	-0.7
4,698,782	-		PfGW456L13_4187	0.57	-0.1
4,698,782	-		PfGW456L13_4187	0.57	+0.3
4,698,782	-		PfGW456L13_4187	0.57	+1.1
4,698,847	+		PfGW456L13_4187	0.65	+0.5
4,698,847	+		PfGW456L13_4187	0.65	+1.4
4,698,847	+		PfGW456L13_4187	0.65	+0.2
4,698,848	-		PfGW456L13_4187	0.65	+1.6
4,698,848	-		PfGW456L13_4187	0.65	+0.4
4,698,848	-		PfGW456L13_4187	0.65	+0.8
4,698,848	-		PfGW456L13_4187	0.65	-0.9
4,698,848	-		PfGW456L13_4187	0.65	-0.4
4,698,848	-		PfGW456L13_4187	0.65	+0.1
4,698,848	-		PfGW456L13_4187	0.65	-1.1
4,698,848	-		PfGW456L13_4187	0.65	-0.0
4,698,889	+		PfGW456L13_4187	0.70	+1.8
4,698,889	+		PfGW456L13_4187	0.70	+1.1
4,698,889	+		PfGW456L13_4187	0.70	-0.7
4,698,890	-		PfGW456L13_4187	0.70	+0.2
4,698,934	+		PfGW456L13_4187	0.76	+0.3
4,698,934	+		PfGW456L13_4187	0.76	+0.3
4,698,934	+		PfGW456L13_4187	0.76	+0.8
4,698,934	+		PfGW456L13_4187	0.76	-0.6
4,698,935	-		PfGW456L13_4187	0.76	+0.2
4,698,935	-		PfGW456L13_4187	0.76	+0.4
4,698,935	-		PfGW456L13_4187	0.76	+1.4
4,698,935	-		PfGW456L13_4187	0.76	-1.3
4,698,935	-		PfGW456L13_4187	0.76	-0.1
4,698,935	-		PfGW456L13_4187	0.76	-0.4
4,698,935	-		PfGW456L13_4187	0.76	-0.5
4,698,935	-		PfGW456L13_4187	0.76	+0.6
4,698,970	+		PfGW456L13_4187	0.81	+0.8
4,698,970	+		PfGW456L13_4187	0.81	+0.5
4,698,970	+		PfGW456L13_4187	0.81	-1.0
4,698,970	+		PfGW456L13_4187	0.81	+0.1
4,698,970	+		PfGW456L13_4187	0.81	+1.6
4,698,970	+		PfGW456L13_4187	0.81	-0.3
4,698,971	-		PfGW456L13_4187	0.81	-1.0
4,699,012	+		PfGW456L13_4187	0.86	-0.9
4,699,012	+		PfGW456L13_4187	0.86	-0.5
4,699,012	+		PfGW456L13_4187	0.86	+1.1
4,699,012	+		PfGW456L13_4187	0.86	-1.2
4,699,012	+		PfGW456L13_4187	0.86	+0.1
4,699,012	+		PfGW456L13_4187	0.86	+0.6
4,699,012	+		PfGW456L13_4187	0.86	-0.2
4,699,012	+		PfGW456L13_4187	0.86	+0.4
4,699,012	+		PfGW456L13_4187	0.86	-0.2
4,699,012	+		PfGW456L13_4187	0.86	-0.0
4,699,012	+		PfGW456L13_4187	0.86	+0.1
4,699,013	-		PfGW456L13_4187	0.86	+0.7
4,699,013	-		PfGW456L13_4187	0.86	+0.2
4,699,013	-		PfGW456L13_4187	0.86	+0.8
4,699,013	-		PfGW456L13_4187	0.86	-0.5
4,699,013	-		PfGW456L13_4187	0.86	+0.0
4,699,013	-		PfGW456L13_4187	0.86	-0.4
4,699,013	-		PfGW456L13_4187	0.86	+0.6
4,699,013	-		PfGW456L13_4187	0.86	+0.2
4,699,013	-		PfGW456L13_4187	0.86	+2.0
4,699,013	-		PfGW456L13_4187	0.86	-0.5
4,699,013	-		PfGW456L13_4187	0.86	-0.6
4,699,013	-		PfGW456L13_4187	0.86	+0.9
4,699,013	-		PfGW456L13_4187	0.86	-0.4
4,699,013	-		PfGW456L13_4187	0.86	-0.1
4,699,013	-		PfGW456L13_4187	0.86	+0.0
4,699,013	-		PfGW456L13_4187	0.86	-0.3
4,699,013	-		PfGW456L13_4187	0.86	-0.4
4,699,013	-		PfGW456L13_4187	0.86	+0.9
4,699,027	+		PfGW456L13_4187	0.88	-1.1
4,699,027	+		PfGW456L13_4187	0.88	+0.9
4,699,027	+		PfGW456L13_4187	0.88	-0.0
4,699,027	+		PfGW456L13_4187	0.88	+0.5
4,699,028	-		PfGW456L13_4187	0.88	+0.2
4,699,028	-		PfGW456L13_4187	0.88	+0.4
4,699,028	-		PfGW456L13_4187	0.88	+0.7
4,699,028	-		PfGW456L13_4187	0.88	+0.3
4,699,034	-		PfGW456L13_4187	0.89	-0.1
4,699,034	-		PfGW456L13_4187	0.89	-0.1
4,699,048	+				+0.7
4,699,049	-				+1.6
4,699,049	-				-0.7
4,699,049	-				+0.1
4,699,106	+				+0.3
4,699,106	+				+0.5
4,699,200	+				+0.0
4,699,200	+				-0.2
4,699,200	+				-0.9
4,699,200	+				-1.0
4,699,246	+				+0.1
4,699,246	+				-1.0
4,699,247	-				+1.2
4,699,270	+				+0.2
4,699,270	+				-1.1
4,699,391	+				-0.1
4,699,392	-				+0.4
4,699,423	+				+0.5
4,699,480	+				-0.1
4,699,480	+				-0.9
4,699,480	+				+0.7
4,699,481	-				+1.5
4,699,508	+				+0.1
4,699,508	+				-1.1
4,699,508	+				+0.4
4,699,508	+				+0.1
4,699,509	-				-0.6
4,699,509	-				-0.3
4,699,509	-				+0.2
4,699,509	-				+0.8
4,699,509	-				+0.2
4,699,602	+				+0.4
4,699,602	+				+0.1
4,699,602	+				-0.5
4,699,602	+				-0.9
4,699,602	+				+0.7
4,699,602	+				+1.4
4,699,602	+				-0.4
4,699,602	+				+0.9
4,699,603	-				-1.2
4,699,603	-				+0.1
4,699,603	-				-0.1
4,699,603	-				-1.4
4,699,603	-				-0.6
4,699,608	+				-0.1
4,699,609	-				+0.7
4,699,680	+		PfGW456L13_4188	0.19	+0.6
4,699,681	-		PfGW456L13_4188	0.19	-0.1
4,699,716	+		PfGW456L13_4188	0.24	-0.6
4,699,716	+		PfGW456L13_4188	0.24	+1.0
4,699,716	+		PfGW456L13_4188	0.24	+1.1
4,699,717	-		PfGW456L13_4188	0.24	-0.3
4,699,717	-		PfGW456L13_4188	0.24	-0.3
4,699,851	+		PfGW456L13_4188	0.42	-0.1
4,699,851	+		PfGW456L13_4188	0.42	-0.0
4,699,851	+		PfGW456L13_4188	0.42	-0.0
4,699,851	+		PfGW456L13_4188	0.42	+0.4
4,699,851	+		PfGW456L13_4188	0.42	+1.6
4,699,851	+		PfGW456L13_4188	0.42	+0.4
4,699,851	+		PfGW456L13_4188	0.42	-0.6
4,699,852	-		PfGW456L13_4188	0.42	-0.4
4,699,852	-		PfGW456L13_4188	0.42	-0.3
4,699,852	-		PfGW456L13_4188	0.42	+1.1
4,699,881	+		PfGW456L13_4188	0.46	+0.3
4,699,882	-		PfGW456L13_4188	0.46	+1.4
4,699,882	-		PfGW456L13_4188	0.46	+0.1
4,699,926	+		PfGW456L13_4188	0.52	+0.4
4,699,927	-		PfGW456L13_4188	0.52	+1.3
4,699,927	-		PfGW456L13_4188	0.52	+0.2
4,699,944	+		PfGW456L13_4188	0.54	-1.3
4,699,944	+		PfGW456L13_4188	0.54	+1.2
4,699,944	+		PfGW456L13_4188	0.54	+1.2
4,699,945	-		PfGW456L13_4188	0.54	-1.5
4,699,945	-		PfGW456L13_4188	0.54	-0.9
4,699,945	-		PfGW456L13_4188	0.54	+1.0
4,699,945	-		PfGW456L13_4188	0.54	+0.3
4,699,947	-		PfGW456L13_4188	0.55	-0.2
4,699,947	-		PfGW456L13_4188	0.55	+0.7
4,700,010	+		PfGW456L13_4188	0.63	+0.1
4,700,010	+		PfGW456L13_4188	0.63	+0.6
4,700,010	+		PfGW456L13_4188	0.63	-0.8
4,700,010	+		PfGW456L13_4188	0.63	+1.2
4,700,011	-		PfGW456L13_4188	0.63	-0.4
4,700,011	-		PfGW456L13_4188	0.63	+1.2
4,700,011	-		PfGW456L13_4188	0.63	-0.8
4,700,098	-		PfGW456L13_4188	0.75	+0.7
4,700,133	+		PfGW456L13_4188	0.80	-0.1
4,700,133	+		PfGW456L13_4188	0.80	-1.0
4,700,133	+		PfGW456L13_4188	0.80	+0.5
4,700,133	+		PfGW456L13_4188	0.80	+1.0
4,700,133	+		PfGW456L13_4188	0.80	+0.2
4,700,133	+		PfGW456L13_4188	0.80	+0.2
4,700,133	+		PfGW456L13_4188	0.80	-0.2
4,700,133	+		PfGW456L13_4188	0.80	+0.4
4,700,133	+		PfGW456L13_4188	0.80	+0.4
4,700,134	-		PfGW456L13_4188	0.80	+0.1
4,700,134	-		PfGW456L13_4188	0.80	-0.7
4,700,134	-		PfGW456L13_4188	0.80	+3.0
4,700,134	-		PfGW456L13_4188	0.80	+0.3
4,700,134	-		PfGW456L13_4188	0.80	+1.7
4,700,175	+		PfGW456L13_4188	0.85	+0.1
4,700,175	+		PfGW456L13_4188	0.85	+0.6
4,700,175	+		PfGW456L13_4188	0.85	-0.8
4,700,175	+		PfGW456L13_4188	0.85	+0.0
4,700,175	+		PfGW456L13_4188	0.85	+0.2
4,700,176	-		PfGW456L13_4188	0.85	+0.4
4,700,176	-		PfGW456L13_4188	0.85	+0.6
4,700,190	+		PfGW456L13_4188	0.87	+0.5
4,700,191	-		PfGW456L13_4188	0.87	-0.3
4,700,196	+		PfGW456L13_4188	0.88	-1.4
4,700,196	+		PfGW456L13_4188	0.88	+0.9
4,700,211	+				+0.0
4,700,211	+				-0.0
4,700,211	+				+0.4
4,700,211	+				-0.0
4,700,211	+				+0.6
4,700,211	+				+0.9
4,700,211	+				+0.6
4,700,212	-				-1.5
4,700,212	-				+1.1
4,700,212	-				-0.3
4,700,212	-				+1.0
4,700,353	-				-1.0
4,700,395	+				+0.1
4,700,395	+				+0.0
4,700,396	-				-0.1
4,700,396	-				+2.1
4,700,396	-				+0.2
4,700,396	-				+0.8
4,700,396	-				+0.2
4,700,522	+		PfGW456L13_4189	0.10	+0.6
4,700,522	+		PfGW456L13_4189	0.10	-0.1
4,700,523	-		PfGW456L13_4189	0.10	-0.1
4,700,523	-		PfGW456L13_4189	0.10	+0.1
4,700,523	-		PfGW456L13_4189	0.10	-0.2
4,700,692	-		PfGW456L13_4189	0.25	+1.1
4,700,769	+		PfGW456L13_4189	0.31	-0.2
4,700,769	+				-1.4
4,700,769	+		PfGW456L13_4189	0.31	+0.3
4,700,769	+		PfGW456L13_4189	0.31	-0.5
4,700,769	+		PfGW456L13_4189	0.31	+0.3
4,700,769	+		PfGW456L13_4189	0.31	+0.7
4,700,769	+		PfGW456L13_4189	0.31	+0.3
4,700,769	+		PfGW456L13_4189	0.31	+0.0
4,700,769	+		PfGW456L13_4189	0.31	+0.1
4,700,770	-		PfGW456L13_4189	0.31	+0.9
4,700,770	-		PfGW456L13_4189	0.31	+0.9
4,700,770	-		PfGW456L13_4189	0.31	+0.3
4,700,822	+		PfGW456L13_4189	0.36	-0.5
4,700,822	+		PfGW456L13_4189	0.36	+1.0
4,700,822	+		PfGW456L13_4189	0.36	+1.1
4,700,822	+		PfGW456L13_4189	0.36	+1.1
4,700,823	-		PfGW456L13_4189	0.36	+1.0
4,700,823	-		PfGW456L13_4189	0.36	-0.4
4,700,823	-		PfGW456L13_4189	0.36	-0.1
4,700,823	-		PfGW456L13_4189	0.36	+0.7
4,700,823	-		PfGW456L13_4189	0.36	+0.5
4,700,823	-		PfGW456L13_4189	0.36	-0.2
4,700,826	+		PfGW456L13_4189	0.36	-1.3
4,700,826	+		PfGW456L13_4189	0.36	+0.1
4,700,826	+		PfGW456L13_4189	0.36	+0.4
4,701,092	+		PfGW456L13_4189	0.59	-1.6
4,701,092	+		PfGW456L13_4189	0.59	+0.9
4,701,092	+		PfGW456L13_4189	0.59	+0.3
4,701,092	+		PfGW456L13_4189	0.59	+0.0
4,701,093	-		PfGW456L13_4189	0.59	-2.2
4,701,120	-		PfGW456L13_4189	0.61	-0.5