Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1208

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
1,347,388	+		PfGW456L13_1207	0.18	-0.7
1,347,388	+		PfGW456L13_1207	0.18	+0.2
1,347,388	+		PfGW456L13_1207	0.18	-0.5
1,347,388	+		PfGW456L13_1207	0.18	-1.3
1,347,388	+		PfGW456L13_1207	0.18	-0.1
1,347,388	+		PfGW456L13_1207	0.18	+0.0
1,347,389	-		PfGW456L13_1207	0.18	-0.3
1,347,389	-		PfGW456L13_1207	0.18	+1.1
1,347,389	-		PfGW456L13_1207	0.18	+0.9
1,347,389	-		PfGW456L13_1207	0.18	-1.0
1,347,389	-		PfGW456L13_1207	0.18	+0.2
1,347,389	-		PfGW456L13_1207	0.18	-0.2
1,347,389	-		PfGW456L13_1207	0.18	+0.0
1,347,514	-		PfGW456L13_1207	0.31	+0.0
1,347,518	-		PfGW456L13_1207	0.31	-1.3
1,347,518	-		PfGW456L13_1207	0.31	+1.2
1,347,533	-		PfGW456L13_1207	0.33	-0.2
1,347,563	+		PfGW456L13_1207	0.36	-0.1
1,347,564	-		PfGW456L13_1207	0.36	-1.6
1,347,678	+		PfGW456L13_1207	0.47	+0.8
1,347,678	+		PfGW456L13_1207	0.47	+0.1
1,347,821	+		PfGW456L13_1207	0.62	-0.8
1,347,821	+		PfGW456L13_1207	0.62	+0.3
1,347,821	+		PfGW456L13_1207	0.62	-0.6
1,347,822	-		PfGW456L13_1207	0.62	+0.3
1,347,822	-		PfGW456L13_1207	0.62	+0.1
1,347,822	-		PfGW456L13_1207	0.62	+0.6
1,347,822	-		PfGW456L13_1207	0.62	+0.0
1,347,914	+		PfGW456L13_1207	0.71	-0.3
1,347,915	-		PfGW456L13_1207	0.71	+0.7
1,347,915	-		PfGW456L13_1207	0.71	+0.3
1,347,929	+		PfGW456L13_1207	0.73	+0.8
1,347,930	-		PfGW456L13_1207	0.73	+0.4
1,348,046	+		PfGW456L13_1207	0.84	+0.3
1,348,046	+		PfGW456L13_1207	0.84	+0.6
1,348,046	+		PfGW456L13_1207	0.84	-1.1
1,348,047	-		PfGW456L13_1207	0.85	+1.1
1,348,047	-		PfGW456L13_1207	0.85	-0.4
1,348,205	-				+1.5
1,348,249	+				-0.2
1,348,249	+				-0.3
1,348,250	-				+0.3
1,348,250	-				+0.3
1,348,250	-				+0.7
1,348,250	-				+0.4
1,348,438	+				-0.3
1,348,439	-				+1.0
1,348,439	-				-0.2
1,348,447	+				-0.6
1,348,448	-				+0.8
1,348,448	-				-0.6
1,348,448	-				-0.3
1,348,448	-				+0.1
1,348,651	+		PfGW456L13_1208	0.16	+0.2
1,348,651	+		PfGW456L13_1208	0.16	-1.6
1,348,651	+		PfGW456L13_1208	0.16	+0.1
1,348,651	+		PfGW456L13_1208	0.16	-1.7
1,348,651	+		PfGW456L13_1208	0.16	-0.3
1,348,651	+		PfGW456L13_1208	0.16	-0.1
1,348,651	+		PfGW456L13_1208	0.16	-0.5
1,348,651	+		PfGW456L13_1208	0.16	-0.1
1,348,652	-		PfGW456L13_1208	0.16	+1.1
1,348,652	-		PfGW456L13_1208	0.16	-0.9
1,348,652	-		PfGW456L13_1208	0.16	+0.4
1,348,652	-		PfGW456L13_1208	0.16	-1.4
1,348,652	-		PfGW456L13_1208	0.16	+0.3
1,348,652	-		PfGW456L13_1208	0.16	-1.7
1,348,652	-		PfGW456L13_1208	0.16	+0.6
1,348,768	+		PfGW456L13_1208	0.21	-0.4
1,348,768	+		PfGW456L13_1208	0.21	+0.4
1,348,769	-		PfGW456L13_1208	0.21	+0.2
1,348,769	-		PfGW456L13_1208	0.21	-1.3
1,348,783	+		PfGW456L13_1208	0.21	+0.2
1,348,784	-		PfGW456L13_1208	0.21	-0.5
1,348,836	-		PfGW456L13_1208	0.23	+0.3
1,348,858	+		PfGW456L13_1208	0.24	-0.5
1,348,858	+		PfGW456L13_1208	0.24	+1.3
1,348,858	+		PfGW456L13_1208	0.24	-0.4
1,348,996	-		PfGW456L13_1208	0.30	-0.1
1,349,071	+		PfGW456L13_1208	0.33	-0.0
1,349,324	-		PfGW456L13_1208	0.44	+0.2
1,349,557	+		PfGW456L13_1208	0.54	+0.4
1,349,569	+		PfGW456L13_1208	0.54	+0.3
1,349,569	+		PfGW456L13_1208	0.54	+0.7
1,349,570	-		PfGW456L13_1208	0.54	-0.9
1,349,713	+		PfGW456L13_1208	0.60	+0.4
1,349,713	+		PfGW456L13_1208	0.60	-0.8
1,349,713	+		PfGW456L13_1208	0.60	-1.3
1,349,713	+		PfGW456L13_1208	0.60	+1.4
1,349,713	+		PfGW456L13_1208	0.60	-1.4
1,349,714	-		PfGW456L13_1208	0.60	+0.8
1,349,714	-		PfGW456L13_1208	0.60	-0.6
1,349,714	-		PfGW456L13_1208	0.60	+0.2
1,349,714	-		PfGW456L13_1208	0.60	-0.0
1,349,746	+		PfGW456L13_1208	0.61	+0.2
1,349,818	+		PfGW456L13_1208	0.64	+0.1
1,349,818	+		PfGW456L13_1208	0.64	+0.5
1,349,819	-		PfGW456L13_1208	0.64	-0.5
1,349,819	-		PfGW456L13_1208	0.64	+0.2
1,349,950	+		PfGW456L13_1208	0.70	+0.0
1,350,050	+		PfGW456L13_1208	0.74	+1.2
1,350,050	+		PfGW456L13_1208	0.74	+0.3
1,350,050	+		PfGW456L13_1208	0.74	+1.4
1,350,051	-		PfGW456L13_1208	0.74	+1.1
1,350,051	-		PfGW456L13_1208	0.74	-0.4
1,350,051	-		PfGW456L13_1208	0.74	+0.1
1,350,051	-		PfGW456L13_1208	0.74	-0.0
1,350,051	-		PfGW456L13_1208	0.74	-0.1
1,350,051	-		PfGW456L13_1208	0.74	+0.8
1,350,161	-		PfGW456L13_1208	0.79	+0.7
1,350,161	-		PfGW456L13_1208	0.79	+0.1
1,350,184	-		PfGW456L13_1208	0.80	-0.5
1,350,282	+		PfGW456L13_1208	0.84	+1.3
1,350,283	-		PfGW456L13_1208	0.84	-0.4
1,350,283	-		PfGW456L13_1208	0.84	-0.3
1,350,453	+				+0.9
1,350,453	+				-0.3
1,350,453	+				+0.5
1,350,454	-				-0.5
1,350,454	-				+0.9
1,350,454	-				-0.5
1,350,454	-				-0.3
1,350,518	+				-0.2
1,350,638	+				+0.1
1,350,638	+				+0.3
1,350,638	+				+0.3
1,350,638	+				-0.5
1,350,639	-				-0.3
1,350,639	-				+0.4
1,350,730	+				+0.1
1,350,730	+				-2.0
1,350,730	+				-0.0
1,350,731	-				+0.1
1,350,796	+				-0.1
1,350,797	-				-0.4
1,350,917	+		PfGW456L13_1209	0.26	-1.6
1,350,917	+		PfGW456L13_1209	0.26	+0.3
1,350,918	-		PfGW456L13_1209	0.27	-1.8
1,350,918	-		PfGW456L13_1209	0.27	+0.0
1,350,918	-		PfGW456L13_1209	0.27	+0.2
1,351,155	+		PfGW456L13_1209	0.62	+0.2
1,351,155	+		PfGW456L13_1209	0.62	+1.0
1,351,156	-		PfGW456L13_1209	0.62	-1.8
1,351,156	-		PfGW456L13_1209	0.62	+1.3
1,351,202	+		PfGW456L13_1209	0.68	-0.3
1,351,389	+				+0.6
1,351,389	+				+0.5
1,351,389	+				+1.3
1,351,389	+				+0.8
1,351,389	+				+0.6
1,351,390	-				+0.9
1,351,390	-				-0.7
1,351,390	-				+0.4
1,351,390	-				-0.3
1,351,413	+				+1.0
1,351,414	-				+0.2
1,351,414	-				+0.3
1,351,414	-				-1.3
1,351,414	-				+1.0
1,351,428	+				+0.3
1,351,428	+				-0.5
1,351,429	-				+0.2
1,351,429	-				+0.5
1,351,538	-				+0.9
1,351,538	-				+0.4
1,351,538	-				+0.5
1,351,553	+				-0.5