Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5096 and PfGW456L13_5097 are separated by 9 nucleotides PfGW456L13_5097 and PfGW456L13_5098 are separated by 28 nucleotides PfGW456L13_5098 and PfGW456L13_5099 are separated by 17 nucleotides PfGW456L13_5099 and PfGW456L13_5100 are separated by 116 nucleotides
PfGW456L13_5096 - FIG004454: RNA binding protein, at 5,686,562 to 5,686,870
_5096
PfGW456L13_5097 - hypothetical protein, at 5,686,880 to 5,687,284
_5097
PfGW456L13_5098 - Transcription elongation factor GreA, at 5,687,313 to 5,687,774
_5098
PfGW456L13_5099 - Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), at 5,687,792 to 5,691,013
_5099
PfGW456L13_5100 - Carbamoyl-phosphate synthase small chain (EC 6.3.5.5), at 5,691,130 to 5,692,266
_5100
Position (kb) 5687
5688
5689
5690
5691
5692 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5686.948 kb on + strand, within PfGW456L13_5097 at 5686.948 kb on + strand, within PfGW456L13_5097 at 5686.949 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5686.966 kb on - strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.019 kb on + strand, within PfGW456L13_5097 at 5687.020 kb on - strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.034 kb on + strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.035 kb on - strand, within PfGW456L13_5097 at 5687.075 kb on + strand, within PfGW456L13_5097 at 5687.076 kb on - strand, within PfGW456L13_5097 at 5687.120 kb on + strand, within PfGW456L13_5097 at 5687.121 kb on - strand, within PfGW456L13_5097 at 5687.147 kb on + strand, within PfGW456L13_5097 at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.814 kb on - strand at 5687.832 kb on - strand at 5688.504 kb on + strand, within PfGW456L13_5099 at 5690.466 kb on + strand, within PfGW456L13_5099 at 5690.993 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand at 5691.114 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 5,686,948 + PfGW456L13_5097 0.17 -0.8 5,686,948 + PfGW456L13_5097 0.17 +1.2 5,686,949 - PfGW456L13_5097 0.17 +2.0 5,686,966 - PfGW456L13_5097 0.21 +1.8 5,686,966 - PfGW456L13_5097 0.21 +1.6 5,686,966 - PfGW456L13_5097 0.21 +1.1 5,686,966 - PfGW456L13_5097 0.21 +0.4 5,686,966 - PfGW456L13_5097 0.21 -1.1 5,687,019 + PfGW456L13_5097 0.34 -0.1 5,687,019 + PfGW456L13_5097 0.34 -0.1 5,687,019 + PfGW456L13_5097 0.34 +1.5 5,687,019 + PfGW456L13_5097 0.34 +0.9 5,687,019 + PfGW456L13_5097 0.34 -0.8 5,687,020 - PfGW456L13_5097 0.35 -0.3 5,687,034 + PfGW456L13_5097 0.38 +1.1 5,687,034 + PfGW456L13_5097 0.38 +0.9 5,687,034 + PfGW456L13_5097 0.38 -0.3 5,687,035 - PfGW456L13_5097 0.38 +0.3 5,687,035 - PfGW456L13_5097 0.38 +0.6 5,687,035 - PfGW456L13_5097 0.38 +0.4 5,687,035 - PfGW456L13_5097 0.38 +1.3 5,687,035 - PfGW456L13_5097 0.38 +1.4 5,687,035 - PfGW456L13_5097 0.38 +2.5 5,687,075 + PfGW456L13_5097 0.48 +1.1 5,687,076 - PfGW456L13_5097 0.48 +0.0 5,687,120 + PfGW456L13_5097 0.59 +0.6 5,687,121 - PfGW456L13_5097 0.60 -0.3 5,687,147 + PfGW456L13_5097 0.66 -0.3 5,687,814 - +0.8 5,687,814 - +0.8 5,687,814 - +0.4 5,687,814 - -1.4 5,687,832 - -1.7 5,688,504 + PfGW456L13_5099 0.22 -1.1 5,690,466 + PfGW456L13_5099 0.83 -2.2 5,690,993 - -2.9 5,691,114 - -1.0 5,691,114 - -2.0 5,691,114 - -0.0 5,691,114 - -2.9 5,691,114 - +1.2 5,691,114 - +0.4 5,691,114 - -1.5 5,691,114 - -0.5 5,691,114 - +1.2 5,691,114 - -1.4 5,691,114 - -1.1 5,691,114 - +1.4
Or see this region's nucleotide sequence