Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_5034

Experiment: D-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_5033 and PfGW456L13_5034 are separated by 211 nucleotidesPfGW456L13_5034 and PfGW456L13_5035 are separated by 17 nucleotides PfGW456L13_5033 - Rod shape-determining protein MreB, at 5,608,896 to 5,609,933 _5033 PfGW456L13_5034 - Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7), at 5,610,145 to 5,610,432 _5034 PfGW456L13_5035 - Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7), at 5,610,450 to 5,611,901 _5035 Position (kb) 5610 5611Strain fitness (log2 ratio) -2 -1 0 1 2at 5610.065 kb on + strandat 5610.065 kb on + strandat 5610.073 kb on + strandat 5610.084 kb on + strandat 5610.100 kb on + strandat 5610.430 kb on + strandat 5610.430 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (N)
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5,610,065 + -1.4
5,610,065 + -1.3
5,610,073 + +1.9
5,610,084 + -1.8
5,610,100 + -0.4
5,610,430 + +1.4
5,610,430 + +0.5

Or see this region's nucleotide sequence