Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4789 and PfGW456L13_4790 are separated by 240 nucleotides PfGW456L13_4790 and PfGW456L13_4791 are separated by 697 nucleotides
PfGW456L13_4789 - OpgC protein, at 5,340,429 to 5,341,553
_4789
PfGW456L13_4790 - D-serine/D-alanine/glycine transporter, at 5,341,794 to 5,343,215
_4790
PfGW456L13_4791 - Transposase and inactivated derivatives, at 5,343,913 to 5,344,203
_4791
Position (kb) 5341
5342
5343
5344 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5340.861 kb on + strand, within PfGW456L13_4789 at 5340.862 kb on - strand, within PfGW456L13_4789 at 5340.862 kb on - strand, within PfGW456L13_4789 at 5340.862 kb on - strand, within PfGW456L13_4789 at 5340.948 kb on + strand, within PfGW456L13_4789 at 5341.005 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.134 kb on + strand, within PfGW456L13_4789 at 5341.135 kb on - strand, within PfGW456L13_4789 at 5341.135 kb on - strand, within PfGW456L13_4789 at 5341.135 kb on - strand, within PfGW456L13_4789 at 5341.135 kb on - strand, within PfGW456L13_4789 at 5341.183 kb on + strand, within PfGW456L13_4789 at 5341.183 kb on + strand, within PfGW456L13_4789 at 5341.183 kb on + strand, within PfGW456L13_4789 at 5341.183 kb on + strand, within PfGW456L13_4789 at 5341.183 kb on + strand, within PfGW456L13_4789 at 5341.184 kb on - strand, within PfGW456L13_4789 at 5341.184 kb on - strand, within PfGW456L13_4789 at 5341.184 kb on - strand, within PfGW456L13_4789 at 5341.224 kb on + strand, within PfGW456L13_4789 at 5341.225 kb on - strand, within PfGW456L13_4789 at 5341.225 kb on - strand, within PfGW456L13_4789 at 5341.284 kb on + strand, within PfGW456L13_4789 at 5341.284 kb on + strand, within PfGW456L13_4789 at 5341.543 kb on + strand at 5341.558 kb on + strand at 5341.559 kb on - strand at 5341.559 kb on - strand at 5341.559 kb on - strand at 5341.666 kb on + strand at 5341.666 kb on + strand at 5341.667 kb on - strand at 5341.729 kb on + strand at 5341.788 kb on + strand at 5341.789 kb on - strand at 5341.789 kb on - strand at 5341.789 kb on - strand at 5341.852 kb on + strand at 5341.852 kb on + strand at 5341.852 kb on + strand at 5341.853 kb on - strand at 5341.894 kb on + strand at 5341.894 kb on + strand at 5341.894 kb on + strand at 5341.894 kb on + strand at 5341.894 kb on + strand at 5341.894 kb on + strand at 5341.895 kb on - strand at 5341.895 kb on - strand at 5341.895 kb on - strand at 5341.895 kb on - strand at 5341.921 kb on + strand at 5341.921 kb on + strand at 5341.921 kb on + strand at 5341.922 kb on - strand at 5341.922 kb on - strand at 5341.922 kb on - strand at 5341.922 kb on - strand at 5341.996 kb on + strand, within PfGW456L13_4790 at 5341.997 kb on - strand, within PfGW456L13_4790 at 5342.134 kb on + strand, within PfGW456L13_4790 at 5342.134 kb on + strand, within PfGW456L13_4790 at 5342.134 kb on + strand, within PfGW456L13_4790 at 5342.134 kb on + strand at 5342.134 kb on + strand, within PfGW456L13_4790 at 5342.135 kb on - strand, within PfGW456L13_4790 at 5342.135 kb on - strand, within PfGW456L13_4790 at 5342.145 kb on + strand, within PfGW456L13_4790 at 5342.145 kb on + strand, within PfGW456L13_4790 at 5342.254 kb on + strand, within PfGW456L13_4790 at 5342.254 kb on + strand, within PfGW456L13_4790 at 5342.255 kb on - strand, within PfGW456L13_4790 at 5342.255 kb on - strand, within PfGW456L13_4790 at 5342.255 kb on - strand, within PfGW456L13_4790 at 5342.255 kb on - strand, within PfGW456L13_4790 at 5342.298 kb on + strand, within PfGW456L13_4790 at 5342.298 kb on + strand, within PfGW456L13_4790 at 5342.410 kb on + strand, within PfGW456L13_4790 at 5342.411 kb on - strand, within PfGW456L13_4790 at 5342.443 kb on + strand, within PfGW456L13_4790 at 5342.443 kb on + strand, within PfGW456L13_4790 at 5342.443 kb on + strand, within PfGW456L13_4790 at 5342.443 kb on + strand, within PfGW456L13_4790 at 5342.444 kb on - strand, within PfGW456L13_4790 at 5342.444 kb on - strand, within PfGW456L13_4790 at 5342.444 kb on - strand, within PfGW456L13_4790 at 5342.444 kb on - strand, within PfGW456L13_4790 at 5342.589 kb on + strand, within PfGW456L13_4790 at 5342.589 kb on + strand, within PfGW456L13_4790 at 5342.590 kb on - strand, within PfGW456L13_4790 at 5342.634 kb on - strand, within PfGW456L13_4790 at 5342.634 kb on - strand, within PfGW456L13_4790 at 5342.634 kb on - strand, within PfGW456L13_4790 at 5342.634 kb on - strand, within PfGW456L13_4790 at 5342.637 kb on + strand, within PfGW456L13_4790 at 5342.638 kb on - strand, within PfGW456L13_4790 at 5342.820 kb on + strand, within PfGW456L13_4790 at 5342.820 kb on + strand, within PfGW456L13_4790 at 5342.820 kb on + strand, within PfGW456L13_4790 at 5342.821 kb on - strand, within PfGW456L13_4790 at 5342.821 kb on - strand, within PfGW456L13_4790 at 5342.845 kb on + strand, within PfGW456L13_4790 at 5342.845 kb on + strand, within PfGW456L13_4790 at 5342.845 kb on + strand, within PfGW456L13_4790 at 5342.846 kb on - strand, within PfGW456L13_4790 at 5342.846 kb on - strand, within PfGW456L13_4790 at 5342.846 kb on - strand, within PfGW456L13_4790 at 5342.846 kb on - strand, within PfGW456L13_4790 at 5342.899 kb on + strand, within PfGW456L13_4790 at 5342.899 kb on + strand, within PfGW456L13_4790 at 5342.899 kb on + strand, within PfGW456L13_4790 at 5342.900 kb on - strand, within PfGW456L13_4790 at 5342.938 kb on + strand, within PfGW456L13_4790 at 5342.939 kb on - strand, within PfGW456L13_4790 at 5342.950 kb on + strand, within PfGW456L13_4790 at 5343.040 kb on + strand, within PfGW456L13_4790 at 5343.040 kb on + strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.041 kb on - strand, within PfGW456L13_4790 at 5343.138 kb on - strand at 5343.138 kb on - strand at 5343.236 kb on + strand at 5343.237 kb on - strand at 5343.237 kb on - strand at 5343.243 kb on + strand at 5343.275 kb on - strand at 5343.324 kb on + strand at 5343.366 kb on - strand at 5343.408 kb on + strand at 5343.408 kb on + strand at 5343.409 kb on - strand at 5343.409 kb on - strand at 5343.409 kb on - strand at 5343.412 kb on + strand at 5343.412 kb on + strand at 5343.429 kb on + strand at 5343.682 kb on + strand at 5343.682 kb on + strand at 5343.683 kb on - strand at 5343.699 kb on + strand at 5343.702 kb on + strand at 5343.723 kb on + strand at 5343.724 kb on - strand at 5343.808 kb on + strand at 5343.808 kb on + strand at 5343.808 kb on + strand at 5343.808 kb on + strand at 5343.809 kb on - strand at 5343.809 kb on - strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.872 kb on + strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.873 kb on - strand at 5343.887 kb on + strand at 5343.887 kb on + strand at 5343.888 kb on - strand at 5343.888 kb on - strand at 5343.888 kb on - strand at 5343.911 kb on + strand at 5343.912 kb on - strand at 5343.912 kb on - strand at 5343.912 kb on - strand at 5343.912 kb on - strand at 5343.912 kb on - strand at 5344.123 kb on + strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.124 kb on - strand, within PfGW456L13_4791 at 5344.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 5,340,861 + PfGW456L13_4789 0.38 +0.4 5,340,862 - PfGW456L13_4789 0.38 +0.7 5,340,862 - PfGW456L13_4789 0.38 +1.5 5,340,862 - PfGW456L13_4789 0.38 +0.7 5,340,948 + PfGW456L13_4789 0.46 +0.4 5,341,005 + PfGW456L13_4789 0.51 +1.3 5,341,134 + PfGW456L13_4789 0.63 +1.3 5,341,134 + PfGW456L13_4789 0.63 +1.0 5,341,134 + PfGW456L13_4789 0.63 +0.7 5,341,134 + PfGW456L13_4789 0.63 +1.4 5,341,134 + PfGW456L13_4789 0.63 +0.0 5,341,134 + PfGW456L13_4789 0.63 +2.2 5,341,135 - PfGW456L13_4789 0.63 +0.6 5,341,135 - PfGW456L13_4789 0.63 +0.2 5,341,135 - PfGW456L13_4789 0.63 -0.8 5,341,135 - PfGW456L13_4789 0.63 +0.7 5,341,183 + PfGW456L13_4789 0.67 +0.7 5,341,183 + PfGW456L13_4789 0.67 +0.2 5,341,183 + PfGW456L13_4789 0.67 +0.7 5,341,183 + PfGW456L13_4789 0.67 +1.5 5,341,183 + PfGW456L13_4789 0.67 +2.1 5,341,184 - PfGW456L13_4789 0.67 +0.9 5,341,184 - PfGW456L13_4789 0.67 +0.7 5,341,184 - PfGW456L13_4789 0.67 +0.8 5,341,224 + PfGW456L13_4789 0.71 +1.3 5,341,225 - PfGW456L13_4789 0.71 +0.8 5,341,225 - PfGW456L13_4789 0.71 +0.0 5,341,284 + PfGW456L13_4789 0.76 +1.3 5,341,284 + PfGW456L13_4789 0.76 +1.5 5,341,543 + -0.8 5,341,558 + +0.6 5,341,559 - -0.2 5,341,559 - +0.0 5,341,559 - +0.2 5,341,666 + +0.9 5,341,666 + +1.1 5,341,667 - -0.6 5,341,729 + -0.5 5,341,788 + +2.9 5,341,789 - +1.9 5,341,789 - +2.2 5,341,789 - +1.9 5,341,852 + +5.6 5,341,852 + +0.4 5,341,852 + +4.0 5,341,853 - +2.2 5,341,894 + +2.2 5,341,894 + +2.6 5,341,894 + +3.6 5,341,894 + +3.5 5,341,894 + +3.7 5,341,894 + +1.9 5,341,895 - +2.4 5,341,895 - +3.1 5,341,895 - +2.2 5,341,895 - +3.1 5,341,921 + +2.6 5,341,921 + +3.3 5,341,921 + +2.8 5,341,922 - +2.3 5,341,922 - +3.0 5,341,922 - +1.5 5,341,922 - +2.7 5,341,996 + PfGW456L13_4790 0.14 +4.4 5,341,997 - PfGW456L13_4790 0.14 +2.9 5,342,134 + PfGW456L13_4790 0.24 +2.7 5,342,134 + PfGW456L13_4790 0.24 +2.5 5,342,134 + PfGW456L13_4790 0.24 +2.1 5,342,134 + +3.2 5,342,134 + PfGW456L13_4790 0.24 +3.5 5,342,135 - PfGW456L13_4790 0.24 +3.3 5,342,135 - PfGW456L13_4790 0.24 +2.8 5,342,145 + PfGW456L13_4790 0.25 +3.2 5,342,145 + PfGW456L13_4790 0.25 +3.1 5,342,254 + PfGW456L13_4790 0.32 +2.5 5,342,254 + PfGW456L13_4790 0.32 +2.6 5,342,255 - PfGW456L13_4790 0.32 +2.8 5,342,255 - PfGW456L13_4790 0.32 +3.0 5,342,255 - PfGW456L13_4790 0.32 +3.1 5,342,255 - PfGW456L13_4790 0.32 +1.7 5,342,298 + PfGW456L13_4790 0.35 +1.2 5,342,298 + PfGW456L13_4790 0.35 +3.6 5,342,410 + PfGW456L13_4790 0.43 +1.9 5,342,411 - PfGW456L13_4790 0.43 +2.4 5,342,443 + PfGW456L13_4790 0.46 +3.3 5,342,443 + PfGW456L13_4790 0.46 +3.1 5,342,443 + PfGW456L13_4790 0.46 +2.7 5,342,443 + PfGW456L13_4790 0.46 +3.0 5,342,444 - PfGW456L13_4790 0.46 +2.6 5,342,444 - PfGW456L13_4790 0.46 +2.1 5,342,444 - PfGW456L13_4790 0.46 +2.9 5,342,444 - PfGW456L13_4790 0.46 +3.3 5,342,589 + PfGW456L13_4790 0.56 +2.6 5,342,589 + PfGW456L13_4790 0.56 +3.0 5,342,590 - PfGW456L13_4790 0.56 +1.9 5,342,634 - PfGW456L13_4790 0.59 +3.5 5,342,634 - PfGW456L13_4790 0.59 +2.0 5,342,634 - PfGW456L13_4790 0.59 +2.6 5,342,634 - PfGW456L13_4790 0.59 +3.4 5,342,637 + PfGW456L13_4790 0.59 +1.9 5,342,638 - PfGW456L13_4790 0.59 +3.3 5,342,820 + PfGW456L13_4790 0.72 +3.1 5,342,820 + PfGW456L13_4790 0.72 +2.3 5,342,820 + PfGW456L13_4790 0.72 +1.8 5,342,821 - PfGW456L13_4790 0.72 +2.4 5,342,821 - PfGW456L13_4790 0.72 +3.8 5,342,845 + PfGW456L13_4790 0.74 +2.6 5,342,845 + PfGW456L13_4790 0.74 +2.5 5,342,845 + PfGW456L13_4790 0.74 +3.0 5,342,846 - PfGW456L13_4790 0.74 +2.6 5,342,846 - PfGW456L13_4790 0.74 +3.2 5,342,846 - PfGW456L13_4790 0.74 +2.8 5,342,846 - PfGW456L13_4790 0.74 +3.2 5,342,899 + PfGW456L13_4790 0.78 +3.3 5,342,899 + PfGW456L13_4790 0.78 +2.8 5,342,899 + PfGW456L13_4790 0.78 +2.6 5,342,900 - PfGW456L13_4790 0.78 +2.7 5,342,938 + PfGW456L13_4790 0.80 +3.5 5,342,939 - PfGW456L13_4790 0.81 +3.5 5,342,950 + PfGW456L13_4790 0.81 +3.1 5,343,040 + PfGW456L13_4790 0.88 +3.0 5,343,040 + PfGW456L13_4790 0.88 +3.2 5,343,041 - PfGW456L13_4790 0.88 +3.2 5,343,041 - PfGW456L13_4790 0.88 +2.1 5,343,041 - PfGW456L13_4790 0.88 +2.1 5,343,041 - PfGW456L13_4790 0.88 +1.8 5,343,041 - PfGW456L13_4790 0.88 +2.5 5,343,041 - PfGW456L13_4790 0.88 +2.8 5,343,041 - PfGW456L13_4790 0.88 +2.7 5,343,041 - PfGW456L13_4790 0.88 +3.5 5,343,041 - PfGW456L13_4790 0.88 +2.1 5,343,041 - PfGW456L13_4790 0.88 +3.0 5,343,138 - +3.0 5,343,138 - +2.9 5,343,236 + +1.9 5,343,237 - +4.1 5,343,237 - +1.9 5,343,243 + +3.3 5,343,275 - +2.7 5,343,324 + +3.2 5,343,366 - -2.6 5,343,408 + +0.7 5,343,408 + +1.4 5,343,409 - -1.7 5,343,409 - -1.8 5,343,409 - -1.1 5,343,412 + +1.2 5,343,412 + +1.5 5,343,429 + +1.5 5,343,682 + +0.0 5,343,682 + +0.3 5,343,683 - -2.5 5,343,699 + -1.9 5,343,702 + -0.1 5,343,723 + -0.0 5,343,724 - -3.3 5,343,808 + +0.3 5,343,808 + +0.4 5,343,808 + -0.2 5,343,808 + -1.2 5,343,809 - -2.2 5,343,809 - -2.5 5,343,872 + +0.2 5,343,872 + +0.5 5,343,872 + -1.1 5,343,872 + +0.6 5,343,872 + -0.6 5,343,872 + -1.3 5,343,872 + +0.6 5,343,872 + -1.4 5,343,872 + -2.3 5,343,872 + +0.0 5,343,873 - -2.5 5,343,873 - -1.9 5,343,873 - -1.4 5,343,873 - -1.3 5,343,873 - -1.8 5,343,873 - -1.7 5,343,873 - -2.0 5,343,873 - -2.8 5,343,873 - -2.2 5,343,887 + +0.3 5,343,887 + -0.8 5,343,888 - -3.5 5,343,888 - -1.6 5,343,888 - -2.3 5,343,911 + -0.1 5,343,912 - -2.9 5,343,912 - -2.5 5,343,912 - -1.7 5,343,912 - -0.8 5,343,912 - -1.9 5,344,123 + PfGW456L13_4791 0.72 +0.6 5,344,124 - PfGW456L13_4791 0.73 +1.0 5,344,124 - PfGW456L13_4791 0.73 -1.8 5,344,124 - PfGW456L13_4791 0.73 -1.7 5,344,124 - PfGW456L13_4791 0.73 -1.3 5,344,124 - PfGW456L13_4791 0.73 -2.1 5,344,124 - PfGW456L13_4791 0.73 -1.8 5,344,124 - PfGW456L13_4791 0.73 -1.4 5,344,124 - PfGW456L13_4791 0.73 -0.0 5,344,124 - PfGW456L13_4791 0.73 +0.0 5,344,175 - -3.6
Or see this region's nucleotide sequence