Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4688

Experiment: D-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_4687 and PfGW456L13_4688 are separated by 5 nucleotidesPfGW456L13_4688 and PfGW456L13_4689 are separated by 85 nucleotidesPfGW456L13_4689 and PfGW456L13_4690 are separated by 45 nucleotides PfGW456L13_4687 - 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55), at 5,224,308 to 5,225,153 _4687 PfGW456L13_4688 - CTP synthase (EC 6.3.4.2), at 5,225,159 to 5,226,790 _4688 PfGW456L13_4689 - hypothetical protein, at 5,226,876 to 5,227,019 _4689 PfGW456L13_4690 - tRNA(Ile)-lysidine synthetase (EC 6.3.4.19), at 5,227,065 to 5,228,165 _4690 Position (kb) 5225 5226 5227Strain fitness (log2 ratio) -2 -1 0 1at 5224.275 kb on - strandat 5224.286 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (N)
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5,224,275 - -2.0
5,224,286 + +0.1

Or see this region's nucleotide sequence