Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4271 and PfGW456L13_4272 are separated by 3 nucleotides PfGW456L13_4272 and PfGW456L13_4273 overlap by 7 nucleotides PfGW456L13_4273 and PfGW456L13_4274 are separated by 616 nucleotides
PfGW456L13_4271 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1), at 4,786,328 to 4,788,100
_4271
PfGW456L13_4272 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 4,788,104 to 4,788,472
_4272
PfGW456L13_4273 - Succinate dehydrogenase cytochrome b-556 subunit, at 4,788,466 to 4,788,588
_4273
PfGW456L13_4274 - Citrate synthase (si) (EC 2.3.3.1), at 4,789,205 to 4,790,494
_4274
Position (kb)
4788
4789 Strain fitness (log2 ratio)
-2
-1
0
1 at 4788.994 kb on - strand at 4789.016 kb on - strand at 4789.045 kb on + strand at 4789.046 kb on - strand at 4789.046 kb on - strand at 4789.046 kb on - strand at 4789.046 kb on - strand at 4789.046 kb on - strand at 4789.112 kb on - strand at 4789.141 kb on + strand at 4789.141 kb on + strand at 4789.190 kb on + strand at 4789.190 kb on + strand at 4789.190 kb on + strand at 4789.194 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 4,788,994 - -0.8 4,789,016 - -1.9 4,789,045 + -0.8 4,789,046 - -0.9 4,789,046 - -0.8 4,789,046 - -0.6 4,789,046 - +0.2 4,789,046 - +0.1 4,789,112 - +0.6 4,789,141 + -1.6 4,789,141 + -0.6 4,789,190 + -0.5 4,789,190 + -1.4 4,789,190 + -1.3 4,789,194 + -1.6
Or see this region's nucleotide sequence