Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4264 and PfGW456L13_4265 are separated by 402 nucleotides PfGW456L13_4265 and PfGW456L13_4266 overlap by 1 nucleotides
PfGW456L13_4264 - Branched-chain amino acid transport system carrier protein, at 4,775,769 to 4,777,082
_4264
PfGW456L13_4265 - Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5), at 4,777,485 to 4,778,366
_4265
PfGW456L13_4266 - Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5), at 4,778,366 to 4,779,532
_4266
Position (kb)
4777
4778
4779 Strain fitness (log2 ratio)
-1
0
1
2 at 4776.505 kb on + strand, within PfGW456L13_4264 at 4776.544 kb on + strand, within PfGW456L13_4264 at 4776.544 kb on + strand, within PfGW456L13_4264 at 4776.544 kb on + strand, within PfGW456L13_4264 at 4776.545 kb on - strand, within PfGW456L13_4264 at 4776.701 kb on - strand, within PfGW456L13_4264 at 4776.712 kb on + strand, within PfGW456L13_4264 at 4776.713 kb on - strand, within PfGW456L13_4264 at 4776.818 kb on - strand, within PfGW456L13_4264 at 4776.818 kb on - strand, within PfGW456L13_4264 at 4776.818 kb on - strand, within PfGW456L13_4264 at 4776.981 kb on + strand at 4776.992 kb on + strand at 4776.993 kb on - strand at 4776.993 kb on - strand at 4777.091 kb on + strand at 4777.092 kb on - strand at 4777.092 kb on - strand at 4777.099 kb on + strand at 4777.099 kb on + strand at 4777.100 kb on - strand at 4777.114 kb on + strand at 4777.115 kb on - strand at 4777.158 kb on + strand at 4777.159 kb on - strand at 4777.160 kb on + strand at 4777.161 kb on - strand at 4777.161 kb on - strand at 4777.220 kb on + strand at 4777.221 kb on - strand at 4777.221 kb on - strand at 4777.221 kb on - strand at 4777.254 kb on - strand at 4777.274 kb on + strand at 4777.274 kb on + strand at 4777.274 kb on + strand at 4777.274 kb on + strand at 4777.274 kb on + strand at 4777.275 kb on - strand at 4777.275 kb on - strand at 4777.275 kb on - strand at 4777.308 kb on + strand at 4777.308 kb on + strand at 4777.308 kb on + strand at 4777.309 kb on - strand at 4777.309 kb on - strand at 4777.473 kb on + strand at 4777.486 kb on + strand at 4777.486 kb on + strand at 4777.487 kb on - strand at 4777.487 kb on - strand at 4777.487 kb on - strand at 4777.487 kb on - strand at 4777.487 kb on - strand at 4778.778 kb on + strand, within PfGW456L13_4266 at 4779.283 kb on - strand, within PfGW456L13_4266
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 4,776,505 + PfGW456L13_4264 0.56 +0.1 4,776,544 + PfGW456L13_4264 0.59 +2.1 4,776,544 + PfGW456L13_4264 0.59 +0.5 4,776,544 + PfGW456L13_4264 0.59 +1.4 4,776,545 - PfGW456L13_4264 0.59 +1.1 4,776,701 - PfGW456L13_4264 0.71 -0.9 4,776,712 + PfGW456L13_4264 0.72 +1.0 4,776,713 - PfGW456L13_4264 0.72 +2.0 4,776,818 - PfGW456L13_4264 0.80 +1.4 4,776,818 - PfGW456L13_4264 0.80 +1.3 4,776,818 - PfGW456L13_4264 0.80 +0.6 4,776,981 + +2.2 4,776,992 + +1.2 4,776,993 - +1.4 4,776,993 - -0.2 4,777,091 + +0.6 4,777,092 - -1.0 4,777,092 - -0.4 4,777,099 + -0.8 4,777,099 + -1.0 4,777,100 - +2.4 4,777,114 + +0.3 4,777,115 - +1.2 4,777,158 + +0.2 4,777,159 - -0.8 4,777,160 + +0.7 4,777,161 - -1.1 4,777,161 - +0.8 4,777,220 + -0.1 4,777,221 - +0.9 4,777,221 - +1.4 4,777,221 - +2.2 4,777,254 - +0.8 4,777,274 + +1.4 4,777,274 + +1.0 4,777,274 + +1.7 4,777,274 + +0.0 4,777,274 + +1.0 4,777,275 - -0.6 4,777,275 - +1.7 4,777,275 - -1.4 4,777,308 + +0.1 4,777,308 + +0.7 4,777,308 + +1.9 4,777,309 - -1.2 4,777,309 - +0.2 4,777,473 + -0.3 4,777,486 + -0.0 4,777,486 + +1.4 4,777,487 - +0.5 4,777,487 - +1.0 4,777,487 - -0.9 4,777,487 - +0.2 4,777,487 - -1.4 4,778,778 + PfGW456L13_4266 0.35 +0.8 4,779,283 - PfGW456L13_4266 0.79 -1.2
Or see this region's nucleotide sequence