Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4003

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
4,491,620	+		PfGW456L13_4001	0.78	-2.6
4,491,620	+		PfGW456L13_4001	0.78	-0.7
4,491,620	+		PfGW456L13_4001	0.78	-0.6
4,491,620	+		PfGW456L13_4001	0.78	-3.4
4,491,620	+		PfGW456L13_4001	0.78	-1.8
4,491,620	+		PfGW456L13_4001	0.78	-3.1
4,491,620	+		PfGW456L13_4001	0.78	-2.3
4,491,620	+		PfGW456L13_4001	0.78	-2.1
4,491,620	+		PfGW456L13_4001	0.78	-1.1
4,491,620	+		PfGW456L13_4001	0.78	-0.1
4,491,620	+		PfGW456L13_4001	0.78	-2.1
4,491,620	+		PfGW456L13_4001	0.78	-1.4
4,491,620	+		PfGW456L13_4001	0.78	-1.7
4,491,621	-		PfGW456L13_4001	0.78	-1.9
4,491,621	-		PfGW456L13_4001	0.78	-2.7
4,491,621	-		PfGW456L13_4001	0.78	-1.9
4,491,621	-		PfGW456L13_4001	0.78	-0.8
4,491,621	-		PfGW456L13_4001	0.78	-1.1
4,491,621	-		PfGW456L13_4001	0.78	-0.5
4,491,621	-		PfGW456L13_4001	0.78	+1.7
4,491,621	-		PfGW456L13_4001	0.78	-1.0
4,491,621	-		PfGW456L13_4001	0.78	-3.1
4,491,743	+		PfGW456L13_4001	0.89	-0.1
4,491,744	-		PfGW456L13_4001	0.89	-1.3
4,491,744	-		PfGW456L13_4001	0.89	-0.9
4,491,806	-				-1.2
4,491,808	+				-3.8
4,491,808	+				-2.0
4,491,809	-				-1.3
4,491,893	+				-1.7
4,491,920	-				-2.7
4,491,962	+		PfGW456L13_4002	0.13	-0.9
4,491,969	-		PfGW456L13_4002	0.14	-2.1
4,492,032	+		PfGW456L13_4002	0.23	-3.3
4,492,033	-		PfGW456L13_4002	0.23	-2.3
4,492,033	-		PfGW456L13_4002	0.23	-2.4
4,492,259	+		PfGW456L13_4002	0.58	+0.5
4,492,278	+		PfGW456L13_4002	0.60	-1.7
4,492,307	+		PfGW456L13_4002	0.65	-0.1
4,492,362	+		PfGW456L13_4002	0.73	-1.3
4,492,362	+		PfGW456L13_4002	0.73	-1.2
4,492,362	+		PfGW456L13_4002	0.73	-1.7
4,492,363	-		PfGW456L13_4002	0.73	-0.7
4,492,363	-		PfGW456L13_4002	0.73	-0.4
4,492,378	+		PfGW456L13_4002	0.76	-0.2
4,492,378	+		PfGW456L13_4002	0.76	-2.8
4,492,378	+		PfGW456L13_4002	0.76	-0.1
4,492,378	+		PfGW456L13_4002	0.76	+0.8
4,492,378	+		PfGW456L13_4002	0.76	-0.7
4,492,378	+		PfGW456L13_4002	0.76	-2.2
4,492,378	+		PfGW456L13_4002	0.76	-1.6
4,492,379	-		PfGW456L13_4002	0.76	-1.4
4,492,620	+		PfGW456L13_4003	0.11	-1.7
4,492,620	+		PfGW456L13_4003	0.11	-1.6
4,492,620	+		PfGW456L13_4003	0.11	-0.5
4,492,662	+		PfGW456L13_4003	0.17	-2.7
4,492,663	-		PfGW456L13_4003	0.17	-0.0
4,492,933	+		PfGW456L13_4003	0.52	-2.4
4,492,933	+		PfGW456L13_4003	0.52	-1.2
4,492,933	+		PfGW456L13_4003	0.52	-2.1
4,492,934	-		PfGW456L13_4003	0.52	-0.3
4,492,934	-		PfGW456L13_4003	0.52	-1.1
4,492,967	+		PfGW456L13_4003	0.56	-1.4
4,492,967	+		PfGW456L13_4003	0.56	+1.3
4,492,968	-		PfGW456L13_4003	0.56	-2.1
4,492,974	+		PfGW456L13_4003	0.57	-2.3
4,492,974	+		PfGW456L13_4003	0.57	-1.7
4,492,975	-		PfGW456L13_4003	0.57	-1.0
4,493,058	-		PfGW456L13_4003	0.68	-2.2
4,493,058	-		PfGW456L13_4003	0.68	-2.1
4,493,058	-		PfGW456L13_4003	0.68	-0.2
4,493,099	+		PfGW456L13_4003	0.73	-0.6
4,493,099	+		PfGW456L13_4003	0.73	-0.4
4,493,307	-				+0.3
4,493,307	-				-1.6
4,493,473	+				-1.8
4,493,475	+				-0.7
4,493,475	+				-1.0
4,493,475	+				-3.3
4,493,476	-				+1.6
4,493,476	-				-0.7
4,493,486	+				-2.1
4,493,487	-				-0.2
4,493,504	+				-1.1
4,493,504	+				-0.7
4,493,511	+		PfGW456L13_4004	0.10	-1.2
4,493,511	+		PfGW456L13_4004	0.10	+0.1
4,493,512	-		PfGW456L13_4004	0.10	-0.3
4,493,512	-		PfGW456L13_4004	0.10	-1.2
4,493,523	+		PfGW456L13_4004	0.11	-1.3
4,493,523	+		PfGW456L13_4004	0.11	-1.3
4,493,524	-		PfGW456L13_4004	0.11	-1.3
4,493,541	+				-1.3
4,493,541	+		PfGW456L13_4004	0.12	-0.6
4,493,542	-		PfGW456L13_4004	0.12	-0.7
4,493,546	-				+0.7
4,493,546	-		PfGW456L13_4004	0.12	-1.3
4,493,578	+		PfGW456L13_4004	0.13	-1.7
4,493,578	+		PfGW456L13_4004	0.13	-1.3
4,493,578	+		PfGW456L13_4004	0.13	-1.9
4,493,578	+		PfGW456L13_4004	0.13	-1.6
4,493,578	+		PfGW456L13_4004	0.13	-0.1
4,493,578	+		PfGW456L13_4004	0.13	+0.9
4,493,578	+		PfGW456L13_4004	0.13	-1.2
4,493,579	-		PfGW456L13_4004	0.13	-0.6
4,493,579	-		PfGW456L13_4004	0.13	+0.8
4,493,579	-		PfGW456L13_4004	0.13	-0.3
4,493,579	-		PfGW456L13_4004	0.13	-0.3
4,493,579	-		PfGW456L13_4004	0.13	-3.4
4,493,579	-		PfGW456L13_4004	0.13	-1.7
4,493,580	+		PfGW456L13_4004	0.13	-1.3
4,493,692	+		PfGW456L13_4004	0.19	-0.9
4,493,693	-				+1.3
4,493,693	-		PfGW456L13_4004	0.19	-2.2
4,493,714	-		PfGW456L13_4004	0.20	-1.3
4,493,714	-		PfGW456L13_4004	0.20	-1.0
4,493,714	-		PfGW456L13_4004	0.20	-0.7
4,493,716	+		PfGW456L13_4004	0.20	-2.9
4,493,716	+		PfGW456L13_4004	0.20	-0.5
4,493,716	+		PfGW456L13_4004	0.20	-2.2
4,493,716	+		PfGW456L13_4004	0.20	-1.7
4,493,752	+		PfGW456L13_4004	0.22	-0.7
4,493,752	+		PfGW456L13_4004	0.22	-1.3
4,493,752	+		PfGW456L13_4004	0.22	-0.6
4,493,752	+		PfGW456L13_4004	0.22	-0.2
4,493,753	-		PfGW456L13_4004	0.22	-2.4
4,493,753	-		PfGW456L13_4004	0.22	-1.7
4,493,753	-		PfGW456L13_4004	0.22	-0.3
4,493,753	-		PfGW456L13_4004	0.22	+0.1
4,493,753	-		PfGW456L13_4004	0.22	-1.0
4,493,791	+		PfGW456L13_4004	0.24	-1.3
4,493,791	+		PfGW456L13_4004	0.24	-0.7
4,493,811	+		PfGW456L13_4004	0.25	-1.2
4,493,811	+		PfGW456L13_4004	0.25	-1.6
4,493,812	-		PfGW456L13_4004	0.25	+0.0
4,493,956	+		PfGW456L13_4004	0.32	-1.8
4,493,956	+		PfGW456L13_4004	0.32	-1.9
4,493,979	+		PfGW456L13_4004	0.33	-1.1
4,493,979	+		PfGW456L13_4004	0.33	-0.8
4,493,979	+		PfGW456L13_4004	0.33	-0.8
4,493,980	-				-0.7
4,494,026	+		PfGW456L13_4004	0.35	-2.4
4,494,026	+		PfGW456L13_4004	0.35	-1.1
4,494,026	+		PfGW456L13_4004	0.35	-3.0
4,494,026	+		PfGW456L13_4004	0.35	-1.5
4,494,026	+		PfGW456L13_4004	0.35	-0.9
4,494,027	-		PfGW456L13_4004	0.35	-1.2
4,494,027	-		PfGW456L13_4004	0.35	-2.4
4,494,235	+		PfGW456L13_4004	0.45	+0.8
4,494,235	+		PfGW456L13_4004	0.45	-0.3
4,494,236	-		PfGW456L13_4004	0.45	-1.3
4,494,237	+		PfGW456L13_4004	0.45	-1.8
4,494,237	+		PfGW456L13_4004	0.45	-0.2
4,494,237	+		PfGW456L13_4004	0.45	+0.3
4,494,237	+		PfGW456L13_4004	0.45	-1.9
4,494,238	-		PfGW456L13_4004	0.45	-1.7
4,494,238	-		PfGW456L13_4004	0.45	+1.2
4,494,249	+		PfGW456L13_4004	0.46	-2.4
4,494,299	-		PfGW456L13_4004	0.48	-0.6
4,494,299	-		PfGW456L13_4004	0.48	-1.2