Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4002

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
4,490,963	+		PfGW456L13_4001	0.19	-3.6
4,490,963	+		PfGW456L13_4001	0.19	-0.4
4,490,964	-		PfGW456L13_4001	0.19	-0.9
4,490,964	-		PfGW456L13_4001	0.19	-4.1
4,490,964	-		PfGW456L13_4001	0.19	-0.8
4,490,964	-		PfGW456L13_4001	0.19	-2.7
4,491,005	+		PfGW456L13_4001	0.23	-0.8
4,491,005	+		PfGW456L13_4001	0.23	+0.1
4,491,005	+		PfGW456L13_4001	0.23	-1.8
4,491,005	+		PfGW456L13_4001	0.23	-1.4
4,491,005	+		PfGW456L13_4001	0.23	-0.8
4,491,005	+		PfGW456L13_4001	0.23	-3.0
4,491,005	+		PfGW456L13_4001	0.23	-2.9
4,491,005	+		PfGW456L13_4001	0.23	-1.1
4,491,005	+		PfGW456L13_4001	0.23	-1.3
4,491,006	-		PfGW456L13_4001	0.23	-1.4
4,491,006	-		PfGW456L13_4001	0.23	-1.2
4,491,006	-		PfGW456L13_4001	0.23	-2.4
4,491,006	-		PfGW456L13_4001	0.23	+0.1
4,491,006	-		PfGW456L13_4001	0.23	-2.6
4,491,006	-		PfGW456L13_4001	0.23	-2.7
4,491,084	+		PfGW456L13_4001	0.30	-1.3
4,491,108	-		PfGW456L13_4001	0.32	-1.1
4,491,113	+		PfGW456L13_4001	0.32	-3.2
4,491,113	+		PfGW456L13_4001	0.32	-1.6
4,491,113	+		PfGW456L13_4001	0.32	-1.2
4,491,113	+		PfGW456L13_4001	0.32	-2.0
4,491,113	+		PfGW456L13_4001	0.32	-1.5
4,491,114	-		PfGW456L13_4001	0.32	-3.1
4,491,114	-		PfGW456L13_4001	0.32	-1.3
4,491,114	-		PfGW456L13_4001	0.32	-0.6
4,491,114	-		PfGW456L13_4001	0.32	-0.5
4,491,114	-		PfGW456L13_4001	0.32	-1.8
4,491,116	-		PfGW456L13_4001	0.33	-2.1
4,491,116	-		PfGW456L13_4001	0.33	-1.7
4,491,140	-		PfGW456L13_4001	0.35	-2.1
4,491,166	+		PfGW456L13_4001	0.37	-0.5
4,491,166	+		PfGW456L13_4001	0.37	-0.1
4,491,259	+		PfGW456L13_4001	0.45	-2.5
4,491,259	+		PfGW456L13_4001	0.45	-1.7
4,491,259	+		PfGW456L13_4001	0.45	-0.2
4,491,260	-		PfGW456L13_4001	0.46	-0.8
4,491,260	-		PfGW456L13_4001	0.46	-0.8
4,491,260	-		PfGW456L13_4001	0.46	-1.5
4,491,286	+		PfGW456L13_4001	0.48	-2.2
4,491,322	+		PfGW456L13_4001	0.51	-0.8
4,491,322	+		PfGW456L13_4001	0.51	-2.6
4,491,323	-		PfGW456L13_4001	0.51	-2.3
4,491,328	+		PfGW456L13_4001	0.52	-1.1
4,491,436	+		PfGW456L13_4001	0.61	-1.3
4,491,444	-		PfGW456L13_4001	0.62	-1.1
4,491,444	-		PfGW456L13_4001	0.62	+0.2
4,491,444	-		PfGW456L13_4001	0.62	-2.1
4,491,467	+		PfGW456L13_4001	0.64	-1.1
4,491,467	+		PfGW456L13_4001	0.64	-0.9
4,491,467	+		PfGW456L13_4001	0.64	-2.0
4,491,467	+		PfGW456L13_4001	0.64	-1.6
4,491,468	-		PfGW456L13_4001	0.64	-1.6
4,491,468	-		PfGW456L13_4001	0.64	-1.1
4,491,468	-		PfGW456L13_4001	0.64	-0.8
4,491,468	-		PfGW456L13_4001	0.64	-0.5
4,491,468	-				+1.2
4,491,468	-		PfGW456L13_4001	0.64	-1.2
4,491,476	+		PfGW456L13_4001	0.65	-3.4
4,491,476	+		PfGW456L13_4001	0.65	-2.2
4,491,497	+		PfGW456L13_4001	0.67	-0.2
4,491,497	+		PfGW456L13_4001	0.67	-2.1
4,491,497	+		PfGW456L13_4001	0.67	-3.9
4,491,497	+		PfGW456L13_4001	0.67	-0.5
4,491,497	+		PfGW456L13_4001	0.67	-3.4
4,491,498	-		PfGW456L13_4001	0.67	-1.2
4,491,498	-		PfGW456L13_4001	0.67	-0.3
4,491,498	-		PfGW456L13_4001	0.67	-1.1
4,491,620	+		PfGW456L13_4001	0.78	-2.6
4,491,620	+		PfGW456L13_4001	0.78	-0.7
4,491,620	+		PfGW456L13_4001	0.78	-0.6
4,491,620	+		PfGW456L13_4001	0.78	-3.4
4,491,620	+		PfGW456L13_4001	0.78	-1.8
4,491,620	+		PfGW456L13_4001	0.78	-3.1
4,491,620	+		PfGW456L13_4001	0.78	-2.3
4,491,620	+		PfGW456L13_4001	0.78	-2.1
4,491,620	+		PfGW456L13_4001	0.78	-1.1
4,491,620	+		PfGW456L13_4001	0.78	-0.1
4,491,620	+		PfGW456L13_4001	0.78	-2.1
4,491,620	+		PfGW456L13_4001	0.78	-1.4
4,491,620	+		PfGW456L13_4001	0.78	-1.7
4,491,621	-		PfGW456L13_4001	0.78	-1.9
4,491,621	-		PfGW456L13_4001	0.78	-2.7
4,491,621	-		PfGW456L13_4001	0.78	-1.9
4,491,621	-		PfGW456L13_4001	0.78	-0.8
4,491,621	-		PfGW456L13_4001	0.78	-1.1
4,491,621	-		PfGW456L13_4001	0.78	-0.5
4,491,621	-		PfGW456L13_4001	0.78	+1.7
4,491,621	-		PfGW456L13_4001	0.78	-1.0
4,491,621	-		PfGW456L13_4001	0.78	-3.1
4,491,743	+		PfGW456L13_4001	0.89	-0.1
4,491,744	-		PfGW456L13_4001	0.89	-1.3
4,491,744	-		PfGW456L13_4001	0.89	-0.9
4,491,806	-				-1.2
4,491,808	+				-3.8
4,491,808	+				-2.0
4,491,809	-				-1.3
4,491,893	+				-1.7
4,491,920	-				-2.7
4,491,962	+		PfGW456L13_4002	0.13	-0.9
4,491,969	-		PfGW456L13_4002	0.14	-2.1
4,492,032	+		PfGW456L13_4002	0.23	-3.3
4,492,033	-		PfGW456L13_4002	0.23	-2.3
4,492,033	-		PfGW456L13_4002	0.23	-2.4
4,492,259	+		PfGW456L13_4002	0.58	+0.5
4,492,278	+		PfGW456L13_4002	0.60	-1.7
4,492,307	+		PfGW456L13_4002	0.65	-0.1
4,492,362	+		PfGW456L13_4002	0.73	-1.3
4,492,362	+		PfGW456L13_4002	0.73	-1.2
4,492,362	+		PfGW456L13_4002	0.73	-1.7
4,492,363	-		PfGW456L13_4002	0.73	-0.7
4,492,363	-		PfGW456L13_4002	0.73	-0.4
4,492,378	+		PfGW456L13_4002	0.76	-0.2
4,492,378	+		PfGW456L13_4002	0.76	-2.8
4,492,378	+		PfGW456L13_4002	0.76	-0.1
4,492,378	+		PfGW456L13_4002	0.76	+0.8
4,492,378	+		PfGW456L13_4002	0.76	-0.7
4,492,378	+		PfGW456L13_4002	0.76	-2.2
4,492,378	+		PfGW456L13_4002	0.76	-1.6
4,492,379	-		PfGW456L13_4002	0.76	-1.4
4,492,620	+		PfGW456L13_4003	0.11	-1.7
4,492,620	+		PfGW456L13_4003	0.11	-1.6
4,492,620	+		PfGW456L13_4003	0.11	-0.5
4,492,662	+		PfGW456L13_4003	0.17	-2.7
4,492,663	-		PfGW456L13_4003	0.17	-0.0
4,492,933	+		PfGW456L13_4003	0.52	-2.4
4,492,933	+		PfGW456L13_4003	0.52	-1.2
4,492,933	+		PfGW456L13_4003	0.52	-2.1
4,492,934	-		PfGW456L13_4003	0.52	-0.3
4,492,934	-		PfGW456L13_4003	0.52	-1.1
4,492,967	+		PfGW456L13_4003	0.56	-1.4
4,492,967	+		PfGW456L13_4003	0.56	+1.3
4,492,968	-		PfGW456L13_4003	0.56	-2.1
4,492,974	+		PfGW456L13_4003	0.57	-2.3
4,492,974	+		PfGW456L13_4003	0.57	-1.7
4,492,975	-		PfGW456L13_4003	0.57	-1.0
4,493,058	-		PfGW456L13_4003	0.68	-2.2
4,493,058	-		PfGW456L13_4003	0.68	-2.1
4,493,058	-		PfGW456L13_4003	0.68	-0.2
4,493,099	+		PfGW456L13_4003	0.73	-0.6
4,493,099	+		PfGW456L13_4003	0.73	-0.4
4,493,307	-				+0.3
4,493,307	-				-1.6
4,493,473	+				-1.8
4,493,475	+				-0.7
4,493,475	+				-1.0
4,493,475	+				-3.3
4,493,476	-				+1.6
4,493,476	-				-0.7
4,493,486	+				-2.1
4,493,487	-				-0.2
4,493,504	+				-1.1
4,493,504	+				-0.7
4,493,511	+		PfGW456L13_4004	0.10	-1.2
4,493,511	+		PfGW456L13_4004	0.10	+0.1
4,493,512	-		PfGW456L13_4004	0.10	-0.3
4,493,512	-		PfGW456L13_4004	0.10	-1.2
4,493,523	+		PfGW456L13_4004	0.11	-1.3
4,493,523	+		PfGW456L13_4004	0.11	-1.3
4,493,524	-		PfGW456L13_4004	0.11	-1.3