Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3648

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
4,105,133	+		PfGW456L13_3647	0.25	-2.8
4,105,133	+		PfGW456L13_3647	0.25	-2.5
4,105,133	+		PfGW456L13_3647	0.25	-3.0
4,105,133	+		PfGW456L13_3647	0.25	-4.3
4,105,133	+		PfGW456L13_3647	0.25	-3.7
4,105,133	+		PfGW456L13_3647	0.25	-2.7
4,105,133	+		PfGW456L13_3647	0.25	-3.7
4,105,133	+		PfGW456L13_3647	0.25	-3.5
4,105,133	+		PfGW456L13_3647	0.25	-4.9
4,105,134	-		PfGW456L13_3647	0.25	-3.6
4,105,159	+		PfGW456L13_3647	0.27	-2.3
4,105,159	+		PfGW456L13_3647	0.27	-2.8
4,105,160	-		PfGW456L13_3647	0.27	-2.7
4,105,160	-		PfGW456L13_3647	0.27	-4.4
4,105,160	-		PfGW456L13_3647	0.27	-3.3
4,105,221	+		PfGW456L13_3647	0.34	-3.1
4,105,221	+		PfGW456L13_3647	0.34	-3.2
4,105,221	+		PfGW456L13_3647	0.34	-3.5
4,105,221	+		PfGW456L13_3647	0.34	-3.5
4,105,221	+		PfGW456L13_3647	0.34	-3.6
4,105,222	-		PfGW456L13_3647	0.34	-1.9
4,105,222	-		PfGW456L13_3647	0.34	-0.9
4,105,222	-		PfGW456L13_3647	0.34	-1.2
4,105,271	+		PfGW456L13_3647	0.39	-4.3
4,105,272	-		PfGW456L13_3647	0.39	-1.9
4,105,312	-		PfGW456L13_3647	0.43	-0.8
4,105,312	-		PfGW456L13_3647	0.43	-4.6
4,105,321	+		PfGW456L13_3647	0.44	-4.1
4,105,389	+		PfGW456L13_3647	0.51	-3.5
4,105,392	+		PfGW456L13_3647	0.51	-3.3
4,105,393	-		PfGW456L13_3647	0.51	-1.7
4,105,442	+		PfGW456L13_3647	0.56	-3.6
4,105,443	-		PfGW456L13_3647	0.56	-2.7
4,105,533	+		PfGW456L13_3647	0.65	-3.0
4,105,533	+		PfGW456L13_3647	0.65	-1.5
4,105,534	-		PfGW456L13_3647	0.65	-2.5
4,105,534	-		PfGW456L13_3647	0.65	-3.8
4,105,534	-		PfGW456L13_3647	0.65	-3.7
4,105,624	+		PfGW456L13_3647	0.74	-3.6
4,105,624	+		PfGW456L13_3647	0.74	-3.4
4,105,624	+		PfGW456L13_3647	0.74	-3.7
4,105,625	-		PfGW456L13_3647	0.74	-4.1
4,105,706	+				+0.1
4,105,706	+		PfGW456L13_3647	0.82	-1.9
4,105,706	+		PfGW456L13_3647	0.82	-4.0
4,105,706	+		PfGW456L13_3647	0.82	-4.5
4,105,706	+		PfGW456L13_3647	0.82	-3.5
4,105,706	+		PfGW456L13_3647	0.82	-3.3
4,105,707	-		PfGW456L13_3647	0.83	-3.2
4,105,707	-				+1.1
4,105,707	-		PfGW456L13_3647	0.83	-2.5
4,105,707	-		PfGW456L13_3647	0.83	-3.7
4,105,707	-		PfGW456L13_3647	0.83	-0.9
4,105,708	+		PfGW456L13_3647	0.83	-4.0
4,105,708	+		PfGW456L13_3647	0.83	-4.0
4,105,708	+		PfGW456L13_3647	0.83	-3.3
4,105,708	+		PfGW456L13_3647	0.83	-2.8
4,105,709	-		PfGW456L13_3647	0.83	-3.0
4,105,709	-		PfGW456L13_3647	0.83	-0.9
4,105,709	-		PfGW456L13_3647	0.83	-1.5
4,105,709	-		PfGW456L13_3647	0.83	-4.4
4,105,709	-		PfGW456L13_3647	0.83	-3.1
4,105,709	-		PfGW456L13_3647	0.83	-3.6
4,105,709	-		PfGW456L13_3647	0.83	-1.5
4,105,835	-				-3.8
4,105,835	-				-0.9
4,105,897	-				+0.9
4,105,919	+				-0.7
4,105,965	+				-1.8
4,105,965	+				-2.0
4,105,966	-				+0.1
4,105,966	-				-2.1
4,106,084	+				-2.8
4,106,085	-				-2.9
4,106,085	-				+0.1
4,106,085	-				-3.4
4,106,085	-				-2.3
4,106,159	-		PfGW456L13_3648	0.10	-1.0
4,106,263	+		PfGW456L13_3648	0.18	-2.7
4,106,263	+		PfGW456L13_3648	0.18	-3.5
4,106,263	+		PfGW456L13_3648	0.18	-2.3
4,106,264	-		PfGW456L13_3648	0.18	-4.8
4,106,419	+		PfGW456L13_3648	0.30	-3.9
4,106,419	+		PfGW456L13_3648	0.30	-2.7
4,106,420	-		PfGW456L13_3648	0.30	-1.5
4,106,420	-		PfGW456L13_3648	0.30	-1.9
4,106,420	-		PfGW456L13_3648	0.30	-3.9
4,106,545	+		PfGW456L13_3648	0.39	-3.0
4,106,545	+		PfGW456L13_3648	0.39	-2.3
4,106,545	+		PfGW456L13_3648	0.39	-3.0
4,106,546	-		PfGW456L13_3648	0.39	-3.5
4,106,722	+		PfGW456L13_3648	0.52	-2.2
4,106,723	-		PfGW456L13_3648	0.52	-1.0
4,106,734	+		PfGW456L13_3648	0.53	-2.2
4,106,734	+		PfGW456L13_3648	0.53	-2.0
4,106,734	+		PfGW456L13_3648	0.53	-1.9
4,106,763	+		PfGW456L13_3648	0.55	-3.0
4,106,763	+		PfGW456L13_3648	0.55	-2.9
4,106,763	+		PfGW456L13_3648	0.55	-2.0
4,106,763	+		PfGW456L13_3648	0.55	-3.1
4,106,764	-		PfGW456L13_3648	0.55	-1.7
4,106,764	-		PfGW456L13_3648	0.55	-1.5
4,106,764	-		PfGW456L13_3648	0.55	-4.0
4,106,764	-		PfGW456L13_3648	0.55	-1.7
4,106,801	+		PfGW456L13_3648	0.58	-3.3
4,106,801	+		PfGW456L13_3648	0.58	-3.8
4,106,801	+		PfGW456L13_3648	0.58	-3.9
4,106,801	+		PfGW456L13_3648	0.58	-2.8
4,106,801	+		PfGW456L13_3648	0.58	-2.0
4,106,801	+		PfGW456L13_3648	0.58	-3.9
4,106,801	+		PfGW456L13_3648	0.58	-2.0
4,106,801	+		PfGW456L13_3648	0.58	-3.7
4,106,802	-		PfGW456L13_3648	0.58	-2.8
4,106,802	-		PfGW456L13_3648	0.58	-2.9
4,106,802	-		PfGW456L13_3648	0.58	-3.3
4,106,802	-		PfGW456L13_3648	0.58	-2.9
4,106,802	-		PfGW456L13_3648	0.58	-1.9
4,106,802	-		PfGW456L13_3648	0.58	-2.3
4,106,802	-		PfGW456L13_3648	0.58	-2.8
4,106,802	-		PfGW456L13_3648	0.58	-2.2
4,106,802	-		PfGW456L13_3648	0.58	-3.0
4,106,802	-		PfGW456L13_3648	0.58	-3.5
4,106,802	-		PfGW456L13_3648	0.58	-1.7
4,106,802	-		PfGW456L13_3648	0.58	-3.3
4,106,802	-		PfGW456L13_3648	0.58	-3.6
4,106,802	-		PfGW456L13_3648	0.58	-3.5
4,106,802	-		PfGW456L13_3648	0.58	-2.3
4,106,880	+		PfGW456L13_3648	0.64	-3.1
4,106,881	-		PfGW456L13_3648	0.64	-4.1
4,106,998	+		PfGW456L13_3648	0.72	-3.4
4,106,998	+		PfGW456L13_3648	0.72	-3.4
4,106,998	+		PfGW456L13_3648	0.72	-3.0
4,106,998	+		PfGW456L13_3648	0.72	-4.0
4,106,998	+		PfGW456L13_3648	0.72	-1.5
4,106,998	+		PfGW456L13_3648	0.72	-3.4
4,106,998	+		PfGW456L13_3648	0.72	-2.0
4,106,998	+		PfGW456L13_3648	0.72	-3.4
4,106,998	+		PfGW456L13_3648	0.72	-3.0
4,106,998	+		PfGW456L13_3648	0.72	-0.3
4,106,999	-		PfGW456L13_3648	0.72	-3.1
4,106,999	-		PfGW456L13_3648	0.72	-3.3
4,106,999	-		PfGW456L13_3648	0.72	-2.0
4,106,999	-		PfGW456L13_3648	0.72	-2.6
4,106,999	-		PfGW456L13_3648	0.72	-0.9
4,106,999	-		PfGW456L13_3648	0.72	-3.0
4,106,999	-		PfGW456L13_3648	0.72	-3.1
4,106,999	-		PfGW456L13_3648	0.72	-4.2
4,106,999	-		PfGW456L13_3648	0.72	-2.3
4,106,999	-		PfGW456L13_3648	0.72	-2.9
4,106,999	-		PfGW456L13_3648	0.72	-4.2
4,106,999	-		PfGW456L13_3648	0.72	-3.4
4,107,002	+		PfGW456L13_3648	0.73	-2.5
4,107,003	-		PfGW456L13_3648	0.73	-3.0
4,107,003	-		PfGW456L13_3648	0.73	-2.8
4,107,184	+		PfGW456L13_3648	0.86	-2.9
4,107,185	-		PfGW456L13_3648	0.86	-2.6
4,107,185	-		PfGW456L13_3648	0.86	-0.9
4,107,185	-		PfGW456L13_3648	0.86	-3.1
4,107,331	+				-1.7
4,107,470	-				+1.4
4,107,475	-				+2.6
4,107,521	+				-2.7
4,107,521	+				-2.6
4,107,522	-				+2.7
4,107,606	+		PfGW456L13_3649	0.14	-4.1
4,107,607	-		PfGW456L13_3649	0.14	+3.8
4,107,886	+		PfGW456L13_3649	0.35	-1.2
4,107,944	-		PfGW456L13_3649	0.39	+2.0
4,108,212	-		PfGW456L13_3649	0.59	+0.3
4,108,212	-		PfGW456L13_3649	0.59	+0.1
4,108,328	+		PfGW456L13_3649	0.68	-4.5
4,108,328	+		PfGW456L13_3649	0.68	-2.9
4,108,328	+		PfGW456L13_3649	0.68	-1.9
4,108,328	+		PfGW456L13_3649	0.68	-3.0
4,108,328	+		PfGW456L13_3649	0.68	-3.0
4,108,328	+		PfGW456L13_3649	0.68	-3.0
4,108,329	-		PfGW456L13_3649	0.68	-2.3
4,108,329	-		PfGW456L13_3649	0.68	-1.7
4,108,329	-		PfGW456L13_3649	0.68	-2.1
4,108,329	-		PfGW456L13_3649	0.68	+0.0
4,108,329	-		PfGW456L13_3649	0.68	+1.1
4,108,329	-		PfGW456L13_3649	0.68	-0.8
4,108,329	-		PfGW456L13_3649	0.68	-0.7
4,108,329	-		PfGW456L13_3649	0.68	+0.1
4,108,329	-		PfGW456L13_3649	0.68	+0.4
4,108,329	-		PfGW456L13_3649	0.68	+0.3
4,108,329	-		PfGW456L13_3649	0.68	-0.8
4,108,329	-		PfGW456L13_3649	0.68	-1.8
4,108,330	+		PfGW456L13_3649	0.68	-2.8
4,108,330	+		PfGW456L13_3649	0.68	-2.0
4,108,330	+		PfGW456L13_3649	0.68	-2.3
4,108,330	+		PfGW456L13_3649	0.68	-3.0
4,108,330	+		PfGW456L13_3649	0.68	-0.9
4,108,330	+		PfGW456L13_3649	0.68	-2.7
4,108,331	-		PfGW456L13_3649	0.68	-0.2
4,108,331	-		PfGW456L13_3649	0.68	-1.5
4,108,331	-		PfGW456L13_3649	0.68	-0.1
4,108,331	-		PfGW456L13_3649	0.68	-2.4
4,108,331	-		PfGW456L13_3649	0.68	-2.0
4,108,331	-		PfGW456L13_3649	0.68	-1.4
4,108,331	-		PfGW456L13_3649	0.68	-1.1
4,108,364	+		PfGW456L13_3649	0.71	-3.3
4,108,364	+		PfGW456L13_3649	0.71	-2.0
4,108,364	+		PfGW456L13_3649	0.71	-3.8
4,108,364	+		PfGW456L13_3649	0.71	-4.5
4,108,364	+		PfGW456L13_3649	0.71	+0.2
4,108,364	+		PfGW456L13_3649	0.71	-3.5
4,108,365	-		PfGW456L13_3649	0.71	-2.0
4,108,365	-		PfGW456L13_3649	0.71	-2.3
4,108,365	-		PfGW456L13_3649	0.71	-0.4
4,108,365	-		PfGW456L13_3649	0.71	-1.5
4,108,365	-		PfGW456L13_3649	0.71	-3.5
4,108,365	-		PfGW456L13_3649	0.71	-2.0