Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3292

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
3,697,952	+				-0.1
3,697,958	+				+1.0
3,697,959	-				+0.4
3,697,959	-				-0.3
3,697,959	-				-0.0
3,697,962	+				+0.3
3,697,962	+				+1.7
3,697,962	+				+2.2
3,697,962	+				-0.9
3,697,962	+				+1.5
3,697,963	-				-0.7
3,697,963	-				+0.4
3,697,963	-				+0.5
3,697,970	-				-0.4
3,698,205	-		PfGW456L13_3291	0.27	-0.6
3,698,205	-		PfGW456L13_3291	0.27	+1.0
3,698,318	+		PfGW456L13_3291	0.53	-1.8
3,698,504	+				-0.4
3,698,505	-				+0.2
3,698,505	-				+0.6
3,698,505	-				-0.2
3,698,505	-				+1.9
3,698,664	-				-0.8
3,698,682	+				-0.4
3,698,682	+				-1.4
3,698,682	+				+0.6
3,698,738	+				+0.2
3,698,738	+				+0.6
3,698,739	-				+0.8
3,698,739	-				-1.1
3,698,739	-				+0.9
3,698,739	-				-0.5
3,698,739	-				-0.0
3,698,739	-				-0.5
3,698,739	-				+0.5
3,698,739	-				+1.2
3,698,739	-				-0.6
3,698,739	-				+0.6
3,698,739	-				+1.0
3,698,782	+				-0.8
3,698,783	-				-1.0
3,698,783	-				+0.7
3,698,783	-				-0.1
3,698,783	-				+0.5
3,698,899	+		PfGW456L13_3292	0.12	-0.9
3,698,900	-		PfGW456L13_3292	0.12	+0.1
3,698,953	+		PfGW456L13_3292	0.15	+0.3
3,698,953	+		PfGW456L13_3292	0.15	+0.2
3,698,953	+		PfGW456L13_3292	0.15	-1.2
3,698,953	+		PfGW456L13_3292	0.15	-0.6
3,698,953	+		PfGW456L13_3292	0.15	-0.0
3,698,953	+		PfGW456L13_3292	0.15	+0.4
3,698,953	+		PfGW456L13_3292	0.15	-0.6
3,698,954	-		PfGW456L13_3292	0.16	+1.1
3,698,954	-		PfGW456L13_3292	0.16	+0.9
3,698,954	-		PfGW456L13_3292	0.16	+0.3
3,698,954	-		PfGW456L13_3292	0.16	-0.1
3,698,954	-		PfGW456L13_3292	0.16	+0.7
3,698,986	-		PfGW456L13_3292	0.18	+1.4
3,699,029	-		PfGW456L13_3292	0.21	+0.8
3,699,188	+		PfGW456L13_3292	0.32	-2.2
3,699,188	+		PfGW456L13_3292	0.32	+0.2
3,699,188	+		PfGW456L13_3292	0.32	+0.2
3,699,188	+		PfGW456L13_3292	0.32	+0.6
3,699,189	-		PfGW456L13_3292	0.32	+0.9
3,699,189	-		PfGW456L13_3292	0.32	-0.1
3,699,190	+		PfGW456L13_3292	0.32	-0.6
3,699,190	+		PfGW456L13_3292	0.32	+1.4
3,699,190	+		PfGW456L13_3292	0.32	-0.1
3,699,191	-		PfGW456L13_3292	0.32	-0.0
3,699,191	-		PfGW456L13_3292	0.32	-0.5
3,699,218	+		PfGW456L13_3292	0.34	-0.8
3,699,222	+		PfGW456L13_3292	0.34	-1.3
3,699,222	+		PfGW456L13_3292	0.34	-2.5
3,699,484	+		PfGW456L13_3292	0.53	-1.1
3,699,484	+		PfGW456L13_3292	0.53	-0.0
3,699,485	-		PfGW456L13_3292	0.53	+0.1
3,699,485	-		PfGW456L13_3292	0.53	+1.0
3,699,485	-		PfGW456L13_3292	0.53	+0.3
3,699,485	-		PfGW456L13_3292	0.53	+0.4
3,699,485	-		PfGW456L13_3292	0.53	-2.8
3,699,595	+		PfGW456L13_3292	0.60	-0.1
3,699,596	-		PfGW456L13_3292	0.60	-1.4
3,699,670	+		PfGW456L13_3292	0.65	+0.2
3,699,670	+		PfGW456L13_3292	0.65	+1.0
3,699,861	+		PfGW456L13_3292	0.79	-0.1
3,699,862	-		PfGW456L13_3292	0.79	+0.8
3,699,862	-		PfGW456L13_3292	0.79	-0.8
3,699,868	+		PfGW456L13_3292	0.79	+0.6
3,699,868	+		PfGW456L13_3292	0.79	+0.2
3,699,868	+		PfGW456L13_3292	0.79	+0.9
3,699,868	+		PfGW456L13_3292	0.79	-1.0
3,699,869	-		PfGW456L13_3292	0.79	+0.5
3,699,869	-		PfGW456L13_3292	0.79	-0.5
3,699,869	-		PfGW456L13_3292	0.79	-1.3
3,699,869	-		PfGW456L13_3292	0.79	+0.8
3,699,869	-		PfGW456L13_3292	0.79	+0.1
3,699,869	-		PfGW456L13_3292	0.79	+2.3
3,699,869	-		PfGW456L13_3292	0.79	+0.4
3,699,987	+		PfGW456L13_3292	0.88	-1.0
3,700,031	+				+1.2
3,700,032	-				-0.1
3,700,032	-				+2.2
3,700,034	-				+1.4
3,700,034	-				-0.4
3,700,034	-				-1.2
3,700,055	-				-1.3
3,700,232	+				-0.3
3,700,233	-				-1.9
3,700,233	-				+0.1
3,700,308	+				-1.1
3,700,309	-				-0.7
3,700,313	+				-0.5
3,700,313	+				+0.5
3,700,319	+		PfGW456L13_3293	0.11	-0.8
3,700,319	+		PfGW456L13_3293	0.11	+1.0
3,700,319	+		PfGW456L13_3293	0.11	-0.1
3,700,319	+		PfGW456L13_3293	0.11	-0.6
3,700,319	+		PfGW456L13_3293	0.11	-0.7
3,700,320	-		PfGW456L13_3293	0.11	+0.3
3,700,408	+		PfGW456L13_3293	0.41	-0.1
3,700,408	+		PfGW456L13_3293	0.41	-0.1
3,700,408	+		PfGW456L13_3293	0.41	+1.0
3,700,408	+		PfGW456L13_3293	0.41	+0.3
3,700,408	+		PfGW456L13_3293	0.41	+0.8
3,700,408	+		PfGW456L13_3293	0.41	+0.7
3,700,408	+		PfGW456L13_3293	0.41	-1.6
3,700,408	+		PfGW456L13_3293	0.41	+0.5
3,700,409	-		PfGW456L13_3293	0.41	-0.4
3,700,409	-		PfGW456L13_3293	0.41	+1.6
3,700,409	-		PfGW456L13_3293	0.41	-0.9
3,700,409	-		PfGW456L13_3293	0.41	-0.7
3,700,409	-		PfGW456L13_3293	0.41	+0.5
3,700,409	-		PfGW456L13_3293	0.41	-0.4
3,700,409	-		PfGW456L13_3293	0.41	+0.1
3,700,409	-		PfGW456L13_3293	0.41	+0.7
3,700,409	-		PfGW456L13_3293	0.41	+0.0
3,700,409	-		PfGW456L13_3293	0.41	+0.9
3,700,409	-		PfGW456L13_3293	0.41	-1.7
3,700,409	-		PfGW456L13_3293	0.41	+0.1
3,700,410	+		PfGW456L13_3293	0.41	+0.1
3,700,410	+		PfGW456L13_3293	0.41	+0.6
3,700,411	-		PfGW456L13_3293	0.42	-0.4
3,700,411	-		PfGW456L13_3293	0.42	-0.3
3,700,592	+				-2.3
3,700,593	-				+0.9
3,700,593	-				+0.2
3,700,593	-				-0.9
3,700,593	-				+0.1
3,700,687	-				+1.0
3,700,798	+				+0.5
3,700,798	+				+0.5
3,700,799	-				-1.6
3,700,926	+		PfGW456L13_3294	0.25	-0.4
3,701,042	+		PfGW456L13_3294	0.53	+1.2
3,701,042	+		PfGW456L13_3294	0.53	-0.0
3,701,043	-		PfGW456L13_3294	0.53	-1.9
3,701,096	+		PfGW456L13_3294	0.66	-0.2
3,701,096	+		PfGW456L13_3294	0.66	-0.8
3,701,097	-		PfGW456L13_3294	0.66	-1.1
3,701,097	-		PfGW456L13_3294	0.66	-0.8
3,701,097	-		PfGW456L13_3294	0.66	+0.2
3,701,112	-		PfGW456L13_3294	0.70	-1.8
3,701,118	-		PfGW456L13_3294	0.71	-0.9