Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2549 and PfGW456L13_2550 are separated by 235 nucleotides PfGW456L13_2550 and PfGW456L13_5204 are separated by 274 nucleotides PfGW456L13_5204 and PfGW456L13_5205 are separated by 35 nucleotides PfGW456L13_5205 and PfGW456L13_5206 are separated by 59 nucleotides PfGW456L13_5206 and PfGW456L13_5207 are separated by 80 nucleotides
PfGW456L13_2549 - Murein-DD-endopeptidase (EC 3.4.99.-), at 2,815,691 to 2,816,629
_2549
PfGW456L13_2550 - Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9), at 2,816,865 to 2,817,719
_2550
PfGW456L13_5204 - tRNA-Arg-TCT, at 2,817,994 to 2,818,067
_5204
PfGW456L13_5205 - tRNA-His-GTG, at 2,818,103 to 2,818,175
_5205
PfGW456L13_5206 - tRNA-Leu-TAG, at 2,818,235 to 2,818,316
_5206
PfGW456L13_5207 - tRNA-His-GTG, at 2,818,397 to 2,818,469
_5207
Position (kb)
2816
2817
2818 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2815.998 kb on + strand, within PfGW456L13_2549 at 2815.998 kb on + strand, within PfGW456L13_2549 at 2815.998 kb on + strand, within PfGW456L13_2549 at 2815.999 kb on - strand, within PfGW456L13_2549 at 2815.999 kb on - strand, within PfGW456L13_2549 at 2815.999 kb on - strand, within PfGW456L13_2549 at 2816.038 kb on + strand, within PfGW456L13_2549 at 2816.038 kb on + strand, within PfGW456L13_2549 at 2816.038 kb on + strand, within PfGW456L13_2549 at 2816.038 kb on + strand, within PfGW456L13_2549 at 2816.039 kb on - strand, within PfGW456L13_2549 at 2816.039 kb on - strand, within PfGW456L13_2549 at 2816.039 kb on - strand, within PfGW456L13_2549 at 2816.061 kb on + strand, within PfGW456L13_2549 at 2816.061 kb on + strand, within PfGW456L13_2549 at 2816.062 kb on - strand, within PfGW456L13_2549 at 2816.090 kb on + strand, within PfGW456L13_2549 at 2816.090 kb on + strand, within PfGW456L13_2549 at 2816.091 kb on - strand, within PfGW456L13_2549 at 2816.205 kb on + strand, within PfGW456L13_2549 at 2816.205 kb on + strand, within PfGW456L13_2549 at 2816.206 kb on - strand, within PfGW456L13_2549 at 2816.319 kb on + strand, within PfGW456L13_2549 at 2816.320 kb on - strand, within PfGW456L13_2549 at 2816.320 kb on - strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.364 kb on + strand, within PfGW456L13_2549 at 2816.365 kb on - strand, within PfGW456L13_2549 at 2816.365 kb on - strand, within PfGW456L13_2549 at 2816.365 kb on - strand, within PfGW456L13_2549 at 2816.460 kb on + strand, within PfGW456L13_2549 at 2816.460 kb on + strand, within PfGW456L13_2549 at 2816.460 kb on + strand, within PfGW456L13_2549 at 2816.460 kb on + strand, within PfGW456L13_2549 at 2816.460 kb on + strand, within PfGW456L13_2549 at 2816.461 kb on - strand, within PfGW456L13_2549 at 2816.461 kb on - strand, within PfGW456L13_2549 at 2816.461 kb on - strand, within PfGW456L13_2549 at 2816.461 kb on - strand, within PfGW456L13_2549 at 2816.461 kb on - strand, within PfGW456L13_2549 at 2816.528 kb on - strand, within PfGW456L13_2549 at 2816.601 kb on - strand at 2816.623 kb on + strand at 2816.643 kb on + strand at 2816.644 kb on - strand at 2816.654 kb on + strand at 2816.654 kb on + strand at 2816.654 kb on + strand at 2816.655 kb on - strand at 2816.666 kb on + strand at 2816.703 kb on + strand at 2816.703 kb on + strand at 2816.735 kb on + strand at 2818.199 kb on + strand at 2818.322 kb on + strand at 2818.322 kb on + strand at 2818.322 kb on + strand at 2818.322 kb on + strand at 2818.473 kb on + strand at 2818.473 kb on + strand at 2818.562 kb on + strand at 2818.562 kb on + strand at 2818.563 kb on - strand at 2818.563 kb on - strand at 2818.566 kb on + strand at 2818.566 kb on + strand at 2818.566 kb on + strand at 2818.566 kb on + strand at 2818.567 kb on - strand at 2818.567 kb on - strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.646 kb on + strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.647 kb on - strand at 2818.648 kb on + strand at 2818.648 kb on + strand at 2818.649 kb on - strand at 2818.649 kb on - strand at 2818.649 kb on - strand at 2818.650 kb on + strand at 2818.650 kb on + strand at 2818.650 kb on + strand at 2818.651 kb on - strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.689 kb on + strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand at 2818.690 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 2,815,998 + PfGW456L13_2549 0.33 +0.9 2,815,998 + PfGW456L13_2549 0.33 +0.5 2,815,998 + PfGW456L13_2549 0.33 +1.3 2,815,999 - PfGW456L13_2549 0.33 +1.1 2,815,999 - PfGW456L13_2549 0.33 +0.9 2,815,999 - PfGW456L13_2549 0.33 +0.6 2,816,038 + PfGW456L13_2549 0.37 +1.1 2,816,038 + PfGW456L13_2549 0.37 +0.1 2,816,038 + PfGW456L13_2549 0.37 +0.3 2,816,038 + PfGW456L13_2549 0.37 +0.3 2,816,039 - PfGW456L13_2549 0.37 +0.1 2,816,039 - PfGW456L13_2549 0.37 +0.3 2,816,039 - PfGW456L13_2549 0.37 +0.4 2,816,061 + PfGW456L13_2549 0.39 +0.7 2,816,061 + PfGW456L13_2549 0.39 -0.4 2,816,062 - PfGW456L13_2549 0.40 +1.1 2,816,090 + PfGW456L13_2549 0.42 +1.6 2,816,090 + PfGW456L13_2549 0.42 +0.2 2,816,091 - PfGW456L13_2549 0.43 +0.8 2,816,205 + PfGW456L13_2549 0.55 -0.1 2,816,205 + PfGW456L13_2549 0.55 -0.2 2,816,206 - PfGW456L13_2549 0.55 +0.7 2,816,319 + PfGW456L13_2549 0.67 +0.3 2,816,320 - PfGW456L13_2549 0.67 -3.4 2,816,320 - PfGW456L13_2549 0.67 +0.4 2,816,364 + PfGW456L13_2549 0.72 -0.1 2,816,364 + PfGW456L13_2549 0.72 -0.1 2,816,364 + PfGW456L13_2549 0.72 -0.4 2,816,364 + PfGW456L13_2549 0.72 +0.4 2,816,364 + PfGW456L13_2549 0.72 +0.2 2,816,364 + PfGW456L13_2549 0.72 +0.4 2,816,365 - PfGW456L13_2549 0.72 +0.6 2,816,365 - PfGW456L13_2549 0.72 +0.9 2,816,365 - PfGW456L13_2549 0.72 +1.6 2,816,460 + PfGW456L13_2549 0.82 +0.6 2,816,460 + PfGW456L13_2549 0.82 -0.5 2,816,460 + PfGW456L13_2549 0.82 +2.3 2,816,460 + PfGW456L13_2549 0.82 -1.7 2,816,460 + PfGW456L13_2549 0.82 -0.7 2,816,461 - PfGW456L13_2549 0.82 +1.1 2,816,461 - PfGW456L13_2549 0.82 +1.2 2,816,461 - PfGW456L13_2549 0.82 +0.0 2,816,461 - PfGW456L13_2549 0.82 +1.1 2,816,461 - PfGW456L13_2549 0.82 +0.8 2,816,528 - PfGW456L13_2549 0.89 +1.2 2,816,601 - +0.9 2,816,623 + -1.1 2,816,643 + -1.2 2,816,644 - -0.4 2,816,654 + +1.7 2,816,654 + +0.4 2,816,654 + +1.0 2,816,655 - -0.3 2,816,666 + +0.3 2,816,703 + +1.1 2,816,703 + -1.6 2,816,735 + -0.8 2,818,199 + -1.6 2,818,322 + +0.6 2,818,322 + -0.1 2,818,322 + +1.3 2,818,322 + +0.5 2,818,473 + +0.3 2,818,473 + +0.6 2,818,562 + +0.9 2,818,562 + +0.9 2,818,563 - +1.6 2,818,563 - +1.8 2,818,566 + +0.6 2,818,566 + +0.3 2,818,566 + +0.6 2,818,566 + +1.9 2,818,567 - +0.7 2,818,567 - -0.1 2,818,646 + -0.9 2,818,646 + +1.2 2,818,646 + +1.1 2,818,646 + +0.0 2,818,646 + -1.6 2,818,646 + +0.3 2,818,646 + +0.3 2,818,646 + +0.6 2,818,646 + -0.1 2,818,646 + -0.4 2,818,646 + -0.5 2,818,646 + -1.0 2,818,646 + -0.2 2,818,646 + +0.2 2,818,646 + +0.5 2,818,646 + -0.9 2,818,646 + -1.0 2,818,646 + +0.1 2,818,646 + +0.1 2,818,646 + +0.4 2,818,647 - +1.0 2,818,647 - +0.2 2,818,647 - +0.3 2,818,647 - +0.6 2,818,647 - +0.6 2,818,647 - -0.3 2,818,647 - +0.3 2,818,647 - +0.1 2,818,647 - -0.3 2,818,647 - +0.1 2,818,647 - +0.3 2,818,647 - -0.7 2,818,647 - +1.2 2,818,647 - +0.3 2,818,647 - +0.3 2,818,647 - -2.0 2,818,647 - +0.8 2,818,647 - -1.3 2,818,647 - +0.9 2,818,647 - +0.9 2,818,647 - +0.8 2,818,647 - +1.8 2,818,647 - -1.5 2,818,648 + -0.9 2,818,648 + -0.0 2,818,649 - +0.1 2,818,649 - +0.2 2,818,649 - +0.8 2,818,650 + +0.5 2,818,650 + +0.9 2,818,650 + -0.2 2,818,651 - +0.3 2,818,689 + -0.3 2,818,689 + +0.8 2,818,689 + +1.3 2,818,689 + -0.4 2,818,689 + -0.3 2,818,689 + +0.9 2,818,689 + -0.1 2,818,689 + -0.1 2,818,690 - +0.8 2,818,690 - +0.4 2,818,690 - +1.0 2,818,690 - +1.2 2,818,690 - +0.8 2,818,690 - -0.9 2,818,690 - +0.6 2,818,690 - +0.6
Or see this region's nucleotide sequence