Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2223

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
2,440,181	+				+1.1
2,440,182	-				-3.0
2,440,207	-				-2.6
2,440,240	+				-0.8
2,440,240	+				-1.2
2,440,258	-				+0.5
2,440,258	-				-3.5
2,440,258	-				-2.6
2,440,258	-				-0.0
2,440,258	-				-2.5
2,440,260	+				-2.5
2,440,260	+				-1.3
2,440,261	-				-1.8
2,440,261	-				-2.7
2,440,261	-				-2.6
2,440,261	-				-2.9
2,440,261	-				-3.0
2,440,261	-				-2.6
2,440,261	-				-3.2
2,440,271	-				-1.6
2,440,271	-				-2.2
2,440,361	-		PfGW456L13_2222	0.40	-2.2
2,440,534	+				-0.7
2,440,535	-				-3.7
2,440,535	-				-2.0
2,440,535	-				-2.4
2,440,537	+				-1.3
2,440,538	-				-2.5
2,440,538	-				-2.2
2,440,538	-				-2.1
2,440,541	+				-0.5
2,440,541	+				-0.8
2,440,541	+				-1.8
2,440,541	+				-3.1
2,440,541	+				-1.5
2,440,542	-				-2.6
2,440,542	-				-1.7
2,440,542	-				-3.3
2,440,542	-				-2.3
2,440,542	-				-3.2
2,440,542	-				-1.7
2,440,542	-				-3.9
2,440,545	+				-1.8
2,440,545	+				-2.3
2,440,545	+				-3.2
2,440,545	+				-3.2
2,440,545	+				-0.1
2,440,546	-				-2.3
2,440,546	-				-3.1
2,440,546	-				-2.3
2,440,546	-				-2.8
2,440,546	-				-3.8
2,440,546	-				-3.7
2,440,575	+				-3.7
2,440,575	+				-3.1
2,440,576	-				+0.5
2,440,576	-				-1.4
2,440,579	+				-3.4
2,440,579	+				-3.0
2,440,579	+				-2.0
2,440,579	+				-2.0
2,440,579	+				-0.2
2,440,579	+				-2.3
2,440,580	-				-2.1
2,440,580	-				-0.5
2,440,580	-				-1.7
2,440,580	-				+0.5
2,440,580	-				-2.1
2,440,580	-				-2.3
2,440,580	-				-3.5
2,440,583	-				-1.3
2,440,583	-				-2.3
2,440,589	+				-0.5
2,440,589	+				-0.1
2,440,590	-				-0.5
2,440,590	-				-1.0
2,440,595	+				-2.2
2,440,595	+				-1.6
2,440,595	+				-2.9
2,440,595	+				-1.3
2,440,595	+				-1.7
2,440,596	-				-2.0
2,440,596	-				+0.4
2,440,596	-				-3.2
2,440,598	+				-1.5
2,440,598	+				-0.7
2,440,599	-				-2.1
2,440,599	-				-0.1
2,440,599	-				-0.2
2,440,603	-				-1.2
2,440,638	-				-0.7
2,440,666	+				-1.8
2,440,776	+				-2.9
2,440,776	+				-1.1
2,440,777	-				-0.7
2,440,827	-				-0.5
2,440,853	-				-2.4
2,440,871	+				-4.0
2,440,871	+				-3.0
2,440,872	-				-3.5
2,440,872	-				-0.2
2,440,872	-				-0.3
2,440,872	-				-0.6
2,441,010	-				+0.4
2,441,012	+				-1.5
2,441,012	+				-1.7
2,441,012	+				-0.4
2,441,012	+				-0.4
2,441,012	+				-3.0
2,441,012	+				-0.9
2,441,012	+				-1.5
2,441,012	+				-0.7
2,441,013	-				-1.1
2,441,013	-				+0.2
2,441,013	-				-1.2
2,441,013	-				-0.3
2,441,013	-				+0.1
2,441,013	-				-0.6
2,441,013	-				-0.8
2,441,013	-				-1.2
2,441,018	+				-1.5
2,441,018	+				-2.9
2,441,018	+				-2.8
2,441,019	-				-0.0
2,441,019	-				-1.6
2,441,019	-				-4.0
2,441,082	+				-2.7
2,441,082	+				-0.7
2,441,082	+				-1.4
2,441,082	+				-2.3
2,441,082	+				-2.1
2,441,082	+				-1.9
2,441,082	+				-1.9
2,441,082	+				-0.7
2,441,082	+				-2.7
2,441,082	+				-1.1
2,441,082	+				-1.3
2,441,082	+				-4.1
2,441,082	+				-1.3
2,441,082	+				-2.4
2,441,082	+				-1.0
2,441,083	-				+0.5
2,441,083	-				-0.4
2,441,083	-				-2.0
2,441,083	-				+0.9
2,441,083	-				-1.2
2,441,083	-				-0.7
2,441,112	-				-1.9
2,441,117	-				-0.5
2,441,117	-				+0.2
2,441,146	+				+0.9
2,441,146	+				-1.2
2,441,146	+				-3.1
2,441,146	+				-0.8
2,441,147	-				-0.6
2,441,147	-				-2.1
2,441,227	-		PfGW456L13_2223	0.26	-0.4
2,441,227	-		PfGW456L13_2223	0.26	-1.0
2,441,227	-		PfGW456L13_2223	0.26	-0.8
2,441,235	+		PfGW456L13_2223	0.29	-1.6
2,441,235	+		PfGW456L13_2223	0.29	-2.0
2,441,235	+		PfGW456L13_2223	0.29	-1.8
2,441,235	+		PfGW456L13_2223	0.29	-3.3
2,441,235	+		PfGW456L13_2223	0.29	-3.1
2,441,235	+		PfGW456L13_2223	0.29	-1.7
2,441,235	+		PfGW456L13_2223	0.29	-1.9
2,441,235	+		PfGW456L13_2223	0.29	-3.1
2,441,235	+		PfGW456L13_2223	0.29	-0.5
2,441,235	+		PfGW456L13_2223	0.29	-2.4
2,441,235	+		PfGW456L13_2223	0.29	-2.8
2,441,235	+		PfGW456L13_2223	0.29	-1.3
2,441,235	+		PfGW456L13_2223	0.29	-2.4
2,441,235	+		PfGW456L13_2223	0.29	-2.9
2,441,235	+				-0.8
2,441,236	-		PfGW456L13_2223	0.30	-2.3
2,441,236	-		PfGW456L13_2223	0.30	-2.4
2,441,236	-		PfGW456L13_2223	0.30	-0.7
2,441,236	-		PfGW456L13_2223	0.30	-0.5
2,441,236	-		PfGW456L13_2223	0.30	+0.7
2,441,238	-		PfGW456L13_2223	0.30	+0.2
2,441,238	-		PfGW456L13_2223	0.30	+1.5
2,441,264	+		PfGW456L13_2223	0.39	-0.7
2,441,264	+		PfGW456L13_2223	0.39	-2.2
2,441,264	+		PfGW456L13_2223	0.39	-2.9
2,441,264	+		PfGW456L13_2223	0.39	-2.4
2,441,264	+		PfGW456L13_2223	0.39	-1.8
2,441,265	-		PfGW456L13_2223	0.40	-0.1
2,441,265	-		PfGW456L13_2223	0.40	-0.1
2,441,268	+		PfGW456L13_2223	0.41	-3.2
2,441,268	+		PfGW456L13_2223	0.41	-1.1
2,441,268	+		PfGW456L13_2223	0.41	-2.1
2,441,269	-		PfGW456L13_2223	0.41	+0.2
2,441,269	-		PfGW456L13_2223	0.41	-0.5
2,441,269	-		PfGW456L13_2223	0.41	-3.0
2,441,269	-		PfGW456L13_2223	0.41	-1.3
2,441,269	-		PfGW456L13_2223	0.41	-0.5
2,441,340	+		PfGW456L13_2223	0.66	-0.8
2,441,340	+		PfGW456L13_2223	0.66	-3.1
2,441,340	+		PfGW456L13_2223	0.66	-0.5
2,441,358	+		PfGW456L13_2223	0.72	-2.1
2,441,359	-		PfGW456L13_2223	0.72	-3.4
2,441,359	-		PfGW456L13_2223	0.72	+0.3
2,441,382	+		PfGW456L13_2223	0.80	-3.5
2,441,382	+		PfGW456L13_2223	0.80	+0.4
2,441,382	+		PfGW456L13_2223	0.80	-2.5
2,441,382	+		PfGW456L13_2223	0.80	-3.9
2,441,382	+		PfGW456L13_2223	0.80	-2.7
2,441,382	+		PfGW456L13_2223	0.80	-1.5
2,441,382	+		PfGW456L13_2223	0.80	-1.5
2,441,383	-		PfGW456L13_2223	0.81	-1.3
2,441,383	-		PfGW456L13_2223	0.81	-0.1
2,441,383	-		PfGW456L13_2223	0.81	-1.0
2,441,394	+		PfGW456L13_2223	0.84	-0.6
2,441,394	+		PfGW456L13_2223	0.84	-1.8
2,441,395	-		PfGW456L13_2223	0.85	-4.0
2,441,395	-				-0.8
2,441,395	-		PfGW456L13_2223	0.85	-1.0
2,441,459	+				-0.7
2,441,459	+				-3.0
2,441,459	+				-1.8
2,441,460	-				-0.5
2,441,543	+				-1.9
2,441,636	-		PfGW456L13_2224	0.10	-1.2
2,441,875	+		PfGW456L13_2224	0.32	-1.1
2,441,876	-		PfGW456L13_2224	0.32	-2.4
2,441,917	+		PfGW456L13_2224	0.36	-1.5
2,442,145	+		PfGW456L13_2224	0.57	-1.4
2,442,145	+		PfGW456L13_2224	0.57	-1.1
2,442,145	+		PfGW456L13_2224	0.57	-0.5
2,442,266	-		PfGW456L13_2224	0.69	-2.0
2,442,302	+		PfGW456L13_2224	0.72	-1.5
2,442,302	+		PfGW456L13_2224	0.72	+0.3
2,442,302	+		PfGW456L13_2224	0.72	-1.2
2,442,303	-		PfGW456L13_2224	0.72	-1.6
2,442,303	-		PfGW456L13_2224	0.72	-0.2
2,442,303	-		PfGW456L13_2224	0.72	-0.4
2,442,303	-		PfGW456L13_2224	0.72	-0.5
2,442,320	-		PfGW456L13_2224	0.74	-2.2
2,442,320	-		PfGW456L13_2224	0.74	-0.8
2,442,330	-		PfGW456L13_2224	0.75	-2.0
2,442,337	+		PfGW456L13_2224	0.75	-1.7
2,442,338	-		PfGW456L13_2224	0.75	-0.4
2,442,338	-		PfGW456L13_2224	0.75	-1.3
2,442,338	-		PfGW456L13_2224	0.75	-1.3
2,442,338	-		PfGW456L13_2224	0.75	+0.3
2,442,385	+		PfGW456L13_2224	0.80	-0.2
2,442,386	-		PfGW456L13_2224	0.80	-0.6