Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2221

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
2,438,167	-				-0.7
2,438,179	+				-0.2
2,438,179	+				-0.1
2,438,180	-				-2.2
2,438,180	-				-0.1
2,438,248	+				-1.4
2,438,248	+				+0.3
2,438,248	+				-0.5
2,438,248	+				-0.9
2,438,248	+				-1.3
2,438,249	-				+1.2
2,438,249	-				+0.1
2,438,249	-				-0.2
2,438,249	-				-0.5
2,438,249	-				+0.5
2,438,256	+		PfGW456L13_2220	0.10	+1.2
2,438,257	-		PfGW456L13_2220	0.11	-3.0
2,438,257	-		PfGW456L13_2220	0.11	+2.1
2,438,572	+				+2.2
2,438,572	+				+0.0
2,438,572	+				-0.3
2,438,572	+				-1.1
2,438,572	+				-0.0
2,438,572	+				-0.2
2,438,572	+				+0.5
2,438,572	+				-0.3
2,438,572	+				+0.4
2,438,573	-				+1.5
2,438,573	-				-0.5
2,438,573	-				-1.3
2,438,573	-				+0.1
2,438,573	-				-2.0
2,438,573	-				-1.0
2,438,573	-				-0.1
2,438,573	-				-0.5
2,438,573	-				+0.1
2,438,573	-				+0.4
2,438,573	-				+0.2
2,438,573	-				-0.3
2,438,576	+				+0.8
2,438,576	+				-1.1
2,438,576	+				-0.2
2,438,577	-				-0.5
2,438,602	+				-0.3
2,438,602	+				-0.1
2,438,603	-				-1.7
2,438,603	-				-0.7
2,438,616	+				+0.3
2,438,668	+				+0.1
2,438,668	+				-0.4
2,438,668	+				+0.3
2,438,668	+				-0.6
2,438,668	+				-2.7
2,438,669	-				-2.2
2,438,669	-				-1.4
2,438,669	-				-0.2
2,438,669	-				+0.2
2,438,672	+				-1.7
2,438,672	+				+1.0
2,438,869	+				-3.5
2,438,869	+				-0.1
2,438,891	+				-1.5
2,438,906	+				-2.9
2,438,906	+				-1.7
2,438,906	+				-1.5
2,438,938	-				-0.3
2,439,075	+				-0.1
2,439,075	+				-1.8
2,439,112	+				+0.3
2,439,112	+				-2.7
2,439,112	+				+0.8
2,439,113	-				-0.5
2,439,113	-				-2.7
2,439,113	-				-0.8
2,439,113	-				-1.4
2,439,113	-				-0.7
2,439,113	-				-3.2
2,439,126	+				+0.0
2,439,126	+				+0.5
2,439,126	+				+0.3
2,439,126	+				-0.1
2,439,127	-				-0.7
2,439,127	-				+0.1
2,439,127	-				-0.7
2,439,127	-				-0.9
2,439,127	-				-0.4
2,439,127	-				-1.0
2,439,127	-				-2.0
2,439,127	-				-4.0
2,439,128	+				+0.9
2,439,128	+				-0.0
2,439,129	-				+1.3
2,439,129	-				-1.0
2,439,129	-				-1.1
2,439,129	-				-2.1
2,439,129	-				+0.5
2,439,148	+				-1.7
2,439,148	+				-1.7
2,439,148	+				-0.0
2,439,148	+				+0.4
2,439,148	+				-0.0
2,439,149	-				-1.3
2,439,214	-				-3.0
2,439,302	+		PfGW456L13_2221	0.14	+0.5
2,439,303	-		PfGW456L13_2221	0.15	-2.3
2,439,310	+		PfGW456L13_2221	0.15	-2.3
2,439,310	+		PfGW456L13_2221	0.15	+0.4
2,439,310	+		PfGW456L13_2221	0.15	+0.2
2,439,311	-		PfGW456L13_2221	0.15	-2.1
2,439,311	-		PfGW456L13_2221	0.15	-0.7
2,439,311	-		PfGW456L13_2221	0.15	-1.2
2,439,311	-		PfGW456L13_2221	0.15	-1.4
2,439,335	+		PfGW456L13_2221	0.18	-0.5
2,439,488	+		PfGW456L13_2221	0.34	-1.6
2,439,488	+		PfGW456L13_2221	0.34	-1.0
2,439,488	+		PfGW456L13_2221	0.34	-1.8
2,439,488	+		PfGW456L13_2221	0.34	-0.7
2,439,488	+		PfGW456L13_2221	0.34	-2.7
2,439,488	+		PfGW456L13_2221	0.34	-2.1
2,439,489	-		PfGW456L13_2221	0.34	-2.0
2,439,489	-		PfGW456L13_2221	0.34	+0.3
2,439,489	-		PfGW456L13_2221	0.34	-2.7
2,439,489	-		PfGW456L13_2221	0.34	-1.5
2,439,489	-		PfGW456L13_2221	0.34	-2.5
2,439,489	-		PfGW456L13_2221	0.34	-0.7
2,439,489	-		PfGW456L13_2221	0.34	-1.0
2,439,489	-		PfGW456L13_2221	0.34	-3.8
2,439,489	-		PfGW456L13_2221	0.34	-2.3
2,439,491	+		PfGW456L13_2221	0.34	+1.2
2,439,491	+		PfGW456L13_2221	0.34	+0.3
2,439,491	+		PfGW456L13_2221	0.34	-2.8
2,439,491	+		PfGW456L13_2221	0.34	+0.2
2,439,491	+		PfGW456L13_2221	0.34	-1.5
2,439,491	+		PfGW456L13_2221	0.34	-1.4
2,439,491	+		PfGW456L13_2221	0.34	-2.5
2,439,491	+		PfGW456L13_2221	0.34	-2.3
2,439,492	-		PfGW456L13_2221	0.34	-1.5
2,439,492	-		PfGW456L13_2221	0.34	-3.4
2,439,492	-		PfGW456L13_2221	0.34	-1.1
2,439,492	-		PfGW456L13_2221	0.34	-0.3
2,439,518	+		PfGW456L13_2221	0.37	-0.8
2,439,518	+		PfGW456L13_2221	0.37	-1.9
2,439,518	+		PfGW456L13_2221	0.37	-0.1
2,439,519	-		PfGW456L13_2221	0.37	-0.8
2,439,601	+		PfGW456L13_2221	0.45	-0.5
2,439,728	+		PfGW456L13_2221	0.58	-1.4
2,439,729	-		PfGW456L13_2221	0.58	-0.9
2,439,832	-		PfGW456L13_2221	0.69	-2.8
2,439,869	+		PfGW456L13_2221	0.73	+0.1
2,439,870	-		PfGW456L13_2221	0.73	-2.3
2,439,870	-		PfGW456L13_2221	0.73	+1.5
2,439,899	+		PfGW456L13_2221	0.76	+0.0
2,439,900	-		PfGW456L13_2221	0.76	-1.1
2,439,913	+		PfGW456L13_2221	0.77	+0.5
2,439,914	-		PfGW456L13_2221	0.77	-1.1
2,439,914	-		PfGW456L13_2221	0.77	-0.1
2,439,914	-		PfGW456L13_2221	0.77	-1.8
2,440,013	-		PfGW456L13_2221	0.87	-0.2
2,440,013	-		PfGW456L13_2221	0.87	-2.8
2,440,013	-		PfGW456L13_2221	0.87	-2.4
2,440,013	-		PfGW456L13_2221	0.87	+0.1
2,440,181	+				+1.1
2,440,182	-				-3.0
2,440,207	-				-2.6
2,440,240	+				-0.8
2,440,240	+				-1.2
2,440,258	-				+0.5
2,440,258	-				-3.5
2,440,258	-				-2.6
2,440,258	-				-0.0
2,440,258	-				-2.5
2,440,260	+				-2.5
2,440,260	+				-1.3
2,440,261	-				-1.8
2,440,261	-				-2.7
2,440,261	-				-2.6
2,440,261	-				-2.9
2,440,261	-				-3.0
2,440,261	-				-2.6
2,440,261	-				-3.2
2,440,271	-				-1.6
2,440,271	-				-2.2
2,440,361	-		PfGW456L13_2222	0.40	-2.2
2,440,534	+				-0.7
2,440,535	-				-3.7
2,440,535	-				-2.0
2,440,535	-				-2.4
2,440,537	+				-1.3
2,440,538	-				-2.5
2,440,538	-				-2.2
2,440,538	-				-2.1
2,440,541	+				-0.5
2,440,541	+				-0.8
2,440,541	+				-1.8
2,440,541	+				-3.1
2,440,541	+				-1.5
2,440,542	-				-2.6
2,440,542	-				-1.7
2,440,542	-				-3.3
2,440,542	-				-2.3
2,440,542	-				-3.2
2,440,542	-				-1.7
2,440,542	-				-3.9
2,440,545	+				-1.8
2,440,545	+				-2.3
2,440,545	+				-3.2
2,440,545	+				-3.2
2,440,545	+				-0.1
2,440,546	-				-2.3
2,440,546	-				-3.1
2,440,546	-				-2.3
2,440,546	-				-2.8
2,440,546	-				-3.8
2,440,546	-				-3.7
2,440,575	+				-3.7
2,440,575	+				-3.1
2,440,576	-				+0.5
2,440,576	-				-1.4
2,440,579	+				-3.4
2,440,579	+				-3.0
2,440,579	+				-2.0
2,440,579	+				-2.0
2,440,579	+				-0.2
2,440,579	+				-2.3
2,440,580	-				-2.1
2,440,580	-				-0.5
2,440,580	-				-1.7
2,440,580	-				+0.5
2,440,580	-				-2.1
2,440,580	-				-2.3
2,440,580	-				-3.5
2,440,583	-				-1.3
2,440,583	-				-2.3
2,440,589	+				-0.5
2,440,589	+				-0.1
2,440,590	-				-0.5
2,440,590	-				-1.0
2,440,595	+				-2.2
2,440,595	+				-1.6
2,440,595	+				-2.9
2,440,595	+				-1.3
2,440,595	+				-1.7
2,440,596	-				-2.0
2,440,596	-				+0.4
2,440,596	-				-3.2
2,440,598	+				-1.5
2,440,598	+				-0.7
2,440,599	-				-2.1
2,440,599	-				-0.1
2,440,599	-				-0.2
2,440,603	-				-1.2
2,440,638	-				-0.7
2,440,666	+				-1.8
2,440,776	+				-2.9
2,440,776	+				-1.1
2,440,777	-				-0.7
2,440,827	-				-0.5
2,440,853	-				-2.4
2,440,871	+				-4.0
2,440,871	+				-3.0
2,440,872	-				-3.5
2,440,872	-				-0.2
2,440,872	-				-0.3
2,440,872	-				-0.6
2,441,010	-				+0.4
2,441,012	+				-1.5
2,441,012	+				-1.7
2,441,012	+				-0.4
2,441,012	+				-0.4
2,441,012	+				-3.0
2,441,012	+				-0.9
2,441,012	+				-1.5
2,441,012	+				-0.7
2,441,013	-				-1.1
2,441,013	-				+0.2
2,441,013	-				-1.2
2,441,013	-				-0.3
2,441,013	-				+0.1
2,441,013	-				-0.6
2,441,013	-				-0.8
2,441,013	-				-1.2
2,441,018	+				-1.5
2,441,018	+				-2.9
2,441,018	+				-2.8
2,441,019	-				-0.0
2,441,019	-				-1.6
2,441,019	-				-4.0
2,441,082	+				-2.7
2,441,082	+				-0.7
2,441,082	+				-1.4
2,441,082	+				-2.3
2,441,082	+				-2.1
2,441,082	+				-1.9
2,441,082	+				-1.9
2,441,082	+				-0.7
2,441,082	+				-2.7
2,441,082	+				-1.1
2,441,082	+				-1.3
2,441,082	+				-4.1
2,441,082	+				-1.3
2,441,082	+				-2.4
2,441,082	+				-1.0
2,441,083	-				+0.5
2,441,083	-				-0.4
2,441,083	-				-2.0
2,441,083	-				+0.9
2,441,083	-				-1.2
2,441,083	-				-0.7
2,441,112	-				-1.9
2,441,117	-				-0.5
2,441,117	-				+0.2