Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2160

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
2,362,778	+		PfGW456L13_2158	0.11	-2.9
2,362,840	+		PfGW456L13_2158	0.17	+0.3
2,362,840	+		PfGW456L13_2158	0.17	+0.3
2,362,841	-		PfGW456L13_2158	0.17	-0.4
2,362,841	-		PfGW456L13_2158	0.17	+0.2
2,362,841	-		PfGW456L13_2158	0.17	+0.7
2,362,933	-		PfGW456L13_2158	0.27	-2.6
2,362,936	+		PfGW456L13_2158	0.27	+0.5
2,362,936	+		PfGW456L13_2158	0.27	+0.2
2,362,936	+		PfGW456L13_2158	0.27	-0.8
2,362,936	+		PfGW456L13_2158	0.27	+2.1
2,362,936	+		PfGW456L13_2158	0.27	+0.5
2,362,936	+		PfGW456L13_2158	0.27	-0.1
2,362,936	+		PfGW456L13_2158	0.27	-2.2
2,362,936	+		PfGW456L13_2158	0.27	-0.2
2,362,936	+		PfGW456L13_2158	0.27	-1.5
2,362,936	+		PfGW456L13_2158	0.27	+0.5
2,362,936	+		PfGW456L13_2158	0.27	+0.5
2,362,936	+		PfGW456L13_2158	0.27	+1.1
2,362,936	+		PfGW456L13_2158	0.27	+0.3
2,362,936	+		PfGW456L13_2158	0.27	+0.7
2,362,936	+		PfGW456L13_2158	0.27	-0.6
2,362,936	+		PfGW456L13_2158	0.27	+0.4
2,362,936	+		PfGW456L13_2158	0.27	+1.0
2,362,936	+		PfGW456L13_2158	0.27	+0.2
2,362,936	+		PfGW456L13_2158	0.27	+0.9
2,362,936	+		PfGW456L13_2158	0.27	-0.6
2,362,936	+		PfGW456L13_2158	0.27	+0.6
2,362,936	+		PfGW456L13_2158	0.27	+0.8
2,362,936	+		PfGW456L13_2158	0.27	+0.6
2,362,936	+		PfGW456L13_2158	0.27	-0.6
2,362,937	-		PfGW456L13_2158	0.27	-0.1
2,362,937	-		PfGW456L13_2158	0.27	+0.5
2,362,937	-		PfGW456L13_2158	0.27	-2.0
2,362,937	-		PfGW456L13_2158	0.27	-0.4
2,362,937	-		PfGW456L13_2158	0.27	-1.8
2,362,937	-		PfGW456L13_2158	0.27	-0.6
2,362,937	-		PfGW456L13_2158	0.27	-0.1
2,362,937	-		PfGW456L13_2158	0.27	+0.0
2,362,937	-		PfGW456L13_2158	0.27	+0.9
2,362,937	-		PfGW456L13_2158	0.27	-2.7
2,362,937	-		PfGW456L13_2158	0.27	-0.0
2,362,937	-		PfGW456L13_2158	0.27	-1.3
2,362,937	-		PfGW456L13_2158	0.27	-1.9
2,362,937	-		PfGW456L13_2158	0.27	-0.9
2,362,937	-		PfGW456L13_2158	0.27	+0.4
2,362,937	-		PfGW456L13_2158	0.27	+0.2
2,362,937	-		PfGW456L13_2158	0.27	+0.9
2,362,945	+		PfGW456L13_2158	0.28	+0.5
2,362,945	+		PfGW456L13_2158	0.28	-1.2
2,362,945	+		PfGW456L13_2158	0.28	+0.1
2,362,945	+		PfGW456L13_2158	0.28	-0.4
2,362,945	+				-1.5
2,362,945	+		PfGW456L13_2158	0.28	-1.4
2,362,945	+		PfGW456L13_2158	0.28	-0.0
2,362,945	+		PfGW456L13_2158	0.28	+0.8
2,362,946	-		PfGW456L13_2158	0.28	-0.1
2,362,991	+		PfGW456L13_2158	0.33	+0.2
2,363,081	+		PfGW456L13_2158	0.42	+1.0
2,363,081	+		PfGW456L13_2158	0.42	+1.3
2,363,149	+		PfGW456L13_2158	0.49	-1.4
2,363,149	+		PfGW456L13_2158	0.49	+0.4
2,363,150	-		PfGW456L13_2158	0.49	+0.1
2,363,150	-		PfGW456L13_2158	0.49	+1.8
2,363,200	+		PfGW456L13_2158	0.55	+0.4
2,363,200	+		PfGW456L13_2158	0.55	-1.0
2,363,200	+		PfGW456L13_2158	0.55	+0.3
2,363,200	+		PfGW456L13_2158	0.55	+0.7
2,363,200	+		PfGW456L13_2158	0.55	+0.3
2,363,201	-		PfGW456L13_2158	0.55	+0.9
2,363,201	-		PfGW456L13_2158	0.55	+1.4
2,363,201	-		PfGW456L13_2158	0.55	-1.3
2,363,263	+		PfGW456L13_2158	0.61	+0.3
2,363,263	+		PfGW456L13_2158	0.61	+0.9
2,363,263	+		PfGW456L13_2158	0.61	-0.9
2,363,263	+		PfGW456L13_2158	0.61	-0.8
2,363,264	-		PfGW456L13_2158	0.61	-0.2
2,363,264	-		PfGW456L13_2158	0.61	-0.4
2,363,264	-		PfGW456L13_2158	0.61	-0.6
2,363,264	-		PfGW456L13_2158	0.61	+1.8
2,363,264	-		PfGW456L13_2158	0.61	+0.2
2,363,321	+		PfGW456L13_2158	0.67	-1.7
2,363,321	+		PfGW456L13_2158	0.67	-0.6
2,363,321	+		PfGW456L13_2158	0.67	+0.3
2,363,322	-		PfGW456L13_2158	0.67	+0.1
2,363,322	-		PfGW456L13_2158	0.67	+0.4
2,363,322	-		PfGW456L13_2158	0.67	-0.6
2,363,322	-		PfGW456L13_2158	0.67	-1.5
2,363,497	+				+1.1
2,363,497	+		PfGW456L13_2158	0.86	-0.2
2,363,497	+		PfGW456L13_2158	0.86	+0.5
2,363,497	+		PfGW456L13_2158	0.86	-1.1
2,363,497	+		PfGW456L13_2158	0.86	-1.1
2,363,498	-		PfGW456L13_2158	0.86	+0.0
2,363,498	-		PfGW456L13_2158	0.86	-0.7
2,363,498	-		PfGW456L13_2158	0.86	+1.7
2,363,531	-		PfGW456L13_2158	0.89	+1.8
2,363,615	+				-2.1
2,363,633	-				+1.6
2,363,695	-		PfGW456L13_2159	0.36	+1.3
2,363,695	-		PfGW456L13_2159	0.36	+1.0
2,363,880	+				-0.5
2,363,880	+				+0.1
2,363,880	+				-1.2
2,363,881	-				+0.1
2,363,914	-		PfGW456L13_2160	0.11	-1.3
2,364,146	+		PfGW456L13_2160	0.27	-0.1
2,364,147	-		PfGW456L13_2160	0.27	+0.8
2,364,391	+		PfGW456L13_2160	0.45	+0.1
2,364,718	+		PfGW456L13_2160	0.68	-2.6
2,364,718	+		PfGW456L13_2160	0.68	-1.9
2,364,962	-		PfGW456L13_2160	0.86	+0.2
2,365,104	+				-0.2
2,365,105	-				-0.5
2,365,105	-				-0.2
2,365,105	-				-2.5
2,365,174	+				-2.1
2,365,174	+				-0.3
2,365,174	+				-0.7
2,365,174	+				-0.1
2,365,194	-				+0.5
2,365,250	+				+1.0
2,365,323	+				+0.2
2,365,323	+				+1.1
2,365,324	-				-0.2
2,365,324	-				+1.3
2,365,324	-				-0.1
2,365,324	-				-1.6
2,365,336	-				-1.6
2,365,432	-		PfGW456L13_2161	0.15	-1.4
2,365,492	+		PfGW456L13_2161	0.27	-1.1
2,365,492	+		PfGW456L13_2161	0.27	-0.1
2,365,492	+		PfGW456L13_2161	0.27	+0.2
2,365,492	+		PfGW456L13_2161	0.27	+0.0
2,365,492	+		PfGW456L13_2161	0.27	+0.0
2,365,493	-		PfGW456L13_2161	0.27	-1.6
2,365,493	-		PfGW456L13_2161	0.27	+1.2
2,365,493	-		PfGW456L13_2161	0.27	+0.3
2,365,493	-		PfGW456L13_2161	0.27	-0.7
2,365,493	-		PfGW456L13_2161	0.27	+1.0
2,365,502	+		PfGW456L13_2161	0.29	-0.0
2,365,502	+		PfGW456L13_2161	0.29	-0.2
2,365,502	+		PfGW456L13_2161	0.29	-0.5
2,365,502	+		PfGW456L13_2161	0.29	-0.2
2,365,503	-		PfGW456L13_2161	0.29	-1.5
2,365,503	-		PfGW456L13_2161	0.29	+0.3
2,365,574	-		PfGW456L13_2161	0.42	-1.6
2,365,574	-		PfGW456L13_2161	0.42	-0.7
2,365,648	+		PfGW456L13_2161	0.57	+0.4
2,365,648	+		PfGW456L13_2161	0.57	-1.0
2,365,648	+		PfGW456L13_2161	0.57	-0.2
2,365,648	+		PfGW456L13_2161	0.57	-2.1
2,365,649	-		PfGW456L13_2161	0.57	+0.4
2,365,649	-		PfGW456L13_2161	0.57	-1.2
2,365,649	-		PfGW456L13_2161	0.57	-0.6
2,365,696	+		PfGW456L13_2161	0.66	-0.6
2,365,696	+		PfGW456L13_2161	0.66	-1.3
2,365,696	+		PfGW456L13_2161	0.66	-2.9
2,365,697	-		PfGW456L13_2161	0.66	-1.6
2,365,873	+				+0.2
2,365,887	+				-0.4
2,365,887	+				+1.1
2,365,887	+				-1.3
2,365,887	+				+0.8
2,366,059	+		PfGW456L13_2162	0.57	+1.5
2,366,059	+		PfGW456L13_2162	0.57	-0.1
2,366,060	-		PfGW456L13_2162	0.57	-0.6
2,366,060	-		PfGW456L13_2162	0.57	-1.3
2,366,109	+		PfGW456L13_2162	0.74	-2.3
2,366,109	+		PfGW456L13_2162	0.74	+0.5
2,366,110	-		PfGW456L13_2162	0.74	+0.2
2,366,110	-		PfGW456L13_2162	0.74	+0.1
2,366,110	-		PfGW456L13_2162	0.74	+0.2
2,366,110	-		PfGW456L13_2162	0.74	-0.5
2,366,113	+		PfGW456L13_2162	0.75	-2.9
2,366,113	+		PfGW456L13_2162	0.75	-0.3
2,366,113	+		PfGW456L13_2162	0.75	-0.8
2,366,113	+		PfGW456L13_2162	0.75	-0.2
2,366,113	+		PfGW456L13_2162	0.75	-1.3
2,366,114	-		PfGW456L13_2162	0.75	-0.2
2,366,114	-		PfGW456L13_2162	0.75	+0.3
2,366,114	-		PfGW456L13_2162	0.75	+0.2
2,366,114	-		PfGW456L13_2162	0.75	+1.0