Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1813

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
1,995,129	+		PfGW456L13_1812	0.12	-0.5
1,995,129	+		PfGW456L13_1812	0.12	-0.0
1,995,129	+		PfGW456L13_1812	0.12	-3.0
1,995,129	+		PfGW456L13_1812	0.12	-2.5
1,995,129	+		PfGW456L13_1812	0.12	+0.4
1,995,129	+		PfGW456L13_1812	0.12	+0.0
1,995,129	+		PfGW456L13_1812	0.12	-0.3
1,995,129	+		PfGW456L13_1812	0.12	+1.4
1,995,129	+		PfGW456L13_1812	0.12	-0.8
1,995,130	-		PfGW456L13_1812	0.13	+0.7
1,995,130	-		PfGW456L13_1812	0.13	-0.6
1,995,130	-		PfGW456L13_1812	0.13	+0.3
1,995,130	-		PfGW456L13_1812	0.13	-0.5
1,995,130	-		PfGW456L13_1812	0.13	-1.3
1,995,357	-		PfGW456L13_1812	0.43	+1.1
1,995,357	-		PfGW456L13_1812	0.43	-1.1
1,995,387	+		PfGW456L13_1812	0.47	-0.5
1,995,388	-		PfGW456L13_1812	0.47	+0.1
1,995,388	-		PfGW456L13_1812	0.47	-0.9
1,995,388	-		PfGW456L13_1812	0.47	+0.4
1,995,551	+		PfGW456L13_1812	0.69	+0.2
1,995,551	+		PfGW456L13_1812	0.69	+0.3
1,995,648	-		PfGW456L13_1812	0.82	+0.5
1,995,722	+				-0.7
1,995,836	+				-1.0
1,995,836	+				+1.4
1,995,836	+				-0.7
1,995,837	-				+0.8
1,995,837	-				+0.2
1,995,847	-				+0.6
1,995,906	+				-0.6
1,995,907	-				-1.0
1,995,907	-				+1.3
1,996,036	+				+0.1
1,996,036	+				-3.5
1,996,036	+				-1.9
1,996,036	+				-0.4
1,996,037	-				-0.2
1,996,037	-				-1.9
1,996,037	-				-1.1
1,996,077	+				+0.1
1,996,162	+		PfGW456L13_1813	0.13	-3.5
1,996,219	+		PfGW456L13_1813	0.17	-3.4
1,996,219	+		PfGW456L13_1813	0.17	+0.1
1,996,220	-		PfGW456L13_1813	0.17	-2.5
1,996,321	+		PfGW456L13_1813	0.24	-0.4
1,996,321	+		PfGW456L13_1813	0.24	-0.1
1,996,321	+		PfGW456L13_1813	0.24	-0.2
1,996,321	+		PfGW456L13_1813	0.24	-0.7
1,996,321	+		PfGW456L13_1813	0.24	-1.3
1,996,321	+		PfGW456L13_1813	0.24	-1.4
1,996,321	+		PfGW456L13_1813	0.24	+0.4
1,996,321	+		PfGW456L13_1813	0.24	-1.9
1,996,321	+		PfGW456L13_1813	0.24	-1.4
1,996,322	-		PfGW456L13_1813	0.24	-0.1
1,996,322	-		PfGW456L13_1813	0.24	-2.2
1,996,322	-		PfGW456L13_1813	0.24	-1.6
1,996,322	-		PfGW456L13_1813	0.24	-2.1
1,996,322	-		PfGW456L13_1813	0.24	-1.2
1,996,322	-		PfGW456L13_1813	0.24	-1.3
1,996,424	+		PfGW456L13_1813	0.31	-0.9
1,996,817	-		PfGW456L13_1813	0.58	-0.3
1,996,858	+		PfGW456L13_1813	0.61	-1.5
1,997,093	-		PfGW456L13_1813	0.77	-2.7
1,997,379	-				-2.0
1,997,461	+				-0.6
1,997,461	+				-0.4
1,997,461	+				-1.7
1,997,461	+				-2.6
1,997,462	-				-0.5
1,997,462	-				+0.9
1,997,462	-				-2.1
1,997,462	-				-0.5
1,997,464	+				-2.4
1,997,464	+				-2.9
1,997,464	+				-0.2
1,997,464	+				-0.9
1,997,464	+				+0.5
1,997,464	+				-0.3
1,997,464	+				+0.7
1,997,464	+				-1.2
1,997,464	+				-3.0
1,997,464	+				-1.1
1,997,464	+				-1.2
1,997,464	+				-0.7
1,997,464	+				+1.1
1,997,465	-				-0.9
1,997,465	-				-0.9
1,997,465	-				+0.4
1,997,465	-				-1.1
1,997,465	-				-2.1
1,997,465	-				+0.5
1,997,465	-				+0.6
1,997,479	+				+1.9
1,997,479	+				-0.5
1,997,479	+				+0.4
1,997,479	+				-1.9
1,997,480	-				-1.4
1,997,480	-				-1.0
1,997,480	-				-1.5
1,997,480	-				+0.3
1,997,493	-				+0.1
1,997,493	-				-0.9
1,997,493	-				+0.1
1,997,493	-				-0.9
1,997,500	-				-1.2
1,997,500	-				+0.9
1,997,500	-				-1.5
1,997,539	+				-2.7
1,997,551	+				-1.6
1,997,552	-				+0.2
1,997,552	-				+1.3
1,997,552	-				-0.2
1,997,553	+				-1.2
1,997,553	+				+0.4
1,997,553	+				+1.1
1,997,553	+				+1.1
1,997,553	+				-0.2
1,997,554	-				+0.0
1,997,554	-				-0.7
1,997,554	-				+0.1
1,997,554	-				-1.7
1,997,608	-				+0.4
1,997,608	-				-0.5
1,997,646	-				+0.7
1,997,646	-				+0.4
1,997,728	+		PfGW456L13_1814	0.24	+3.1
1,997,728	+		PfGW456L13_1814	0.24	+0.3
1,997,728	+		PfGW456L13_1814	0.24	+0.2
1,997,737	+		PfGW456L13_1814	0.27	+0.1
1,997,737	+		PfGW456L13_1814	0.27	+0.1
1,997,737	+		PfGW456L13_1814	0.27	+0.5
1,997,737	+		PfGW456L13_1814	0.27	+0.6
1,997,737	+		PfGW456L13_1814	0.27	+0.8
1,997,737	+		PfGW456L13_1814	0.27	+0.6
1,997,738	-		PfGW456L13_1814	0.27	-0.5
1,997,738	-		PfGW456L13_1814	0.27	+0.2
1,997,738	-		PfGW456L13_1814	0.27	-0.5
1,997,738	-		PfGW456L13_1814	0.27	+0.7
1,997,809	+		PfGW456L13_1814	0.45	-1.5
1,997,809	+		PfGW456L13_1814	0.45	+0.3
1,997,809	+		PfGW456L13_1814	0.45	+0.7
1,997,809	+		PfGW456L13_1814	0.45	-0.4
1,997,809	+		PfGW456L13_1814	0.45	-0.9
1,997,809	+		PfGW456L13_1814	0.45	+0.7
1,997,809	+		PfGW456L13_1814	0.45	-0.3
1,997,809	+		PfGW456L13_1814	0.45	-1.1
1,997,809	+		PfGW456L13_1814	0.45	+2.9
1,997,809	+		PfGW456L13_1814	0.45	+0.1
1,997,810	-		PfGW456L13_1814	0.46	-0.2
1,997,810	-		PfGW456L13_1814	0.46	+1.1
1,997,810	-		PfGW456L13_1814	0.46	-1.6
1,997,810	-		PfGW456L13_1814	0.46	+1.3
1,997,810	-		PfGW456L13_1814	0.46	+3.3
1,997,810	-		PfGW456L13_1814	0.46	-1.7
1,997,810	-		PfGW456L13_1814	0.46	-2.3
1,997,810	-		PfGW456L13_1814	0.46	+0.0
1,997,810	-		PfGW456L13_1814	0.46	+0.3
1,997,810	-		PfGW456L13_1814	0.46	-0.3
1,997,887	+		PfGW456L13_1814	0.66	-0.8
1,997,887	+		PfGW456L13_1814	0.66	+1.1
1,997,887	+		PfGW456L13_1814	0.66	+0.5
1,997,887	+		PfGW456L13_1814	0.66	-0.4
1,997,888	-		PfGW456L13_1814	0.66	+0.6
1,997,888	-		PfGW456L13_1814	0.66	+0.3
1,997,888	-		PfGW456L13_1814	0.66	-0.2
1,997,888	-		PfGW456L13_1814	0.66	-0.6
1,997,888	-		PfGW456L13_1814	0.66	-1.1
1,997,923	+		PfGW456L13_1814	0.75	-1.7
1,997,974	+		PfGW456L13_1814	0.88	-0.2
1,998,026	-				+1.2
1,998,026	-				-1.1
1,998,062	+				-1.8
1,998,062	+				+0.6
1,998,062	+				+1.4
1,998,062	+				+0.5
1,998,062	+				-0.9
1,998,062	+				-3.2
1,998,062	+				-0.7
1,998,062	+				-0.2
1,998,062	+				-0.1
1,998,063	-				+0.6
1,998,063	-				-0.3
1,998,063	-				-1.0
1,998,063	-				-1.1
1,998,063	-				+0.2
1,998,063	-				-1.1
1,998,063	-				+0.4
1,998,063	-				+0.6
1,998,063	-				+0.5
1,998,063	-				+0.5
1,998,063	-				+0.8
1,998,063	-				+1.5
1,998,063	-				-0.6
1,998,063	-				-1.3
1,998,064	+				-1.0
1,998,064	+				-3.2
1,998,064	+				-0.4
1,998,065	-				+0.7
1,998,065	-				-1.7
1,998,127	-				-0.2
1,998,189	+				+0.6
1,998,189	+				+0.1
1,998,189	+				-0.5
1,998,189	+				+1.4
1,998,189	+				+2.2
1,998,189	+				+1.0
1,998,189	+				+0.7
1,998,189	+				+0.1
1,998,189	+				+0.6
1,998,189	+				-0.2
1,998,189	+				+0.1
1,998,189	+				-0.4
1,998,189	+				+0.3
1,998,189	+				-0.0
1,998,189	+				+0.2
1,998,190	-				+1.7
1,998,190	-				-0.9
1,998,190	-				+0.7
1,998,190	-				+1.0
1,998,190	-				+0.4
1,998,190	-				+0.1
1,998,190	-				+0.3
1,998,190	-				-0.9
1,998,190	-				-0.3
1,998,195	+				+1.4
1,998,212	+				+0.8
1,998,212	+				+0.7
1,998,213	-				-0.1
1,998,213	-				-1.3
1,998,213	-				+1.8
1,998,227	+				+0.0
1,998,227	+				-0.5
1,998,228	-				+1.6
1,998,228	-				-1.7
1,998,293	+		PfGW456L13_1815	0.11	+0.3
1,998,293	+		PfGW456L13_1815	0.11	+0.6
1,998,293	+		PfGW456L13_1815	0.11	+0.2
1,998,293	+		PfGW456L13_1815	0.11	-1.9
1,998,294	-		PfGW456L13_1815	0.11	-0.3
1,998,294	-		PfGW456L13_1815	0.11	+0.8
1,998,338	+		PfGW456L13_1815	0.23	-0.7