Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1325 and PfGW456L13_1326 are separated by 91 nucleotides PfGW456L13_1326 and PfGW456L13_1327 overlap by 4 nucleotides PfGW456L13_1327 and PfGW456L13_1328 are separated by 409 nucleotides
PfGW456L13_1325 - 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7), at 1,463,841 to 1,465,739
_1325
PfGW456L13_1326 - Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29), at 1,465,831 to 1,466,718
_1326
PfGW456L13_1327 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 1,466,715 to 1,466,957
_1327
PfGW456L13_1328 - Probable signal peptide protein, at 1,467,367 to 1,468,155
_1328
Position (kb)
1465
1466
1467 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1465.753 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.755 kb on - strand at 1465.759 kb on - strand at 1465.759 kb on - strand at 1465.759 kb on - strand at 1465.759 kb on - strand at 1465.761 kb on - strand at 1465.761 kb on - strand at 1467.003 kb on + strand at 1467.054 kb on - strand at 1467.054 kb on - strand at 1467.094 kb on + strand at 1467.147 kb on + strand at 1467.148 kb on - strand at 1467.148 kb on - strand at 1467.260 kb on + strand at 1467.261 kb on - strand at 1467.261 kb on - strand at 1467.261 kb on - strand at 1467.313 kb on + strand at 1467.313 kb on + strand at 1467.313 kb on + strand at 1467.314 kb on - strand at 1467.314 kb on - strand at 1467.631 kb on + strand, within PfGW456L13_1328 at 1467.631 kb on + strand, within PfGW456L13_1328 at 1467.631 kb on + strand, within PfGW456L13_1328 at 1467.631 kb on + strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.632 kb on - strand, within PfGW456L13_1328 at 1467.634 kb on - strand, within PfGW456L13_1328 at 1467.665 kb on - strand, within PfGW456L13_1328
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 1,465,753 - +0.9 1,465,755 - -0.2 1,465,755 - -0.9 1,465,755 - +1.3 1,465,755 - -1.1 1,465,755 - +0.4 1,465,755 - -0.8 1,465,755 - -0.4 1,465,755 - -1.3 1,465,755 - -0.3 1,465,755 - +1.8 1,465,755 - +1.4 1,465,755 - +0.4 1,465,755 - +0.3 1,465,755 - +0.2 1,465,755 - +1.3 1,465,755 - -0.6 1,465,755 - +1.0 1,465,755 - +0.3 1,465,759 - +0.4 1,465,759 - -0.6 1,465,759 - +2.3 1,465,759 - +0.0 1,465,761 - +0.5 1,465,761 - +2.0 1,467,003 + -0.8 1,467,054 - +1.1 1,467,054 - +0.2 1,467,094 + +0.7 1,467,147 + -2.0 1,467,148 - +0.3 1,467,148 - +0.2 1,467,260 + -0.8 1,467,261 - +0.5 1,467,261 - -1.7 1,467,261 - +0.8 1,467,313 + +1.0 1,467,313 + -0.3 1,467,313 + +0.1 1,467,314 - -0.6 1,467,314 - -0.7 1,467,631 + PfGW456L13_1328 0.33 +1.9 1,467,631 + PfGW456L13_1328 0.33 -1.3 1,467,631 + PfGW456L13_1328 0.33 -0.2 1,467,631 + PfGW456L13_1328 0.33 +1.5 1,467,632 - PfGW456L13_1328 0.34 +1.1 1,467,632 - PfGW456L13_1328 0.34 -0.2 1,467,632 - PfGW456L13_1328 0.34 -0.4 1,467,632 - PfGW456L13_1328 0.34 -0.6 1,467,632 - PfGW456L13_1328 0.34 -0.2 1,467,632 - PfGW456L13_1328 0.34 -0.7 1,467,634 - PfGW456L13_1328 0.34 -0.6 1,467,665 - PfGW456L13_1328 0.38 -0.1
Or see this region's nucleotide sequence