Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1066 and PfGW456L13_1067 are separated by 35 nucleotides PfGW456L13_1067 and PfGW456L13_1068 are separated by 56 nucleotides PfGW456L13_1068 and PfGW456L13_1069 are separated by 220 nucleotides
PfGW456L13_1066 - Phosphoglycerate kinase (EC 2.7.2.3), at 1,181,723 to 1,182,886
_1066
PfGW456L13_1067 - FIG00955006: hypothetical protein, at 1,182,922 to 1,183,143
_1067
PfGW456L13_1068 - Lipoprotein, putative, at 1,183,200 to 1,183,529
_1068
PfGW456L13_1069 - Fructose-bisphosphate aldolase class II (EC 4.1.2.13), at 1,183,750 to 1,184,814
_1069
Position (kb)
1182
1183
1184 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1182.632 kb on - strand, within PfGW456L13_1066 at 1183.102 kb on + strand, within PfGW456L13_1067 at 1183.102 kb on + strand, within PfGW456L13_1067 at 1183.102 kb on + strand, within PfGW456L13_1067 at 1183.103 kb on - strand, within PfGW456L13_1067 at 1183.103 kb on - strand, within PfGW456L13_1067 at 1183.159 kb on - strand at 1183.211 kb on + strand at 1183.212 kb on - strand at 1183.335 kb on + strand, within PfGW456L13_1068 at 1183.335 kb on + strand, within PfGW456L13_1068 at 1183.352 kb on + strand, within PfGW456L13_1068 at 1183.393 kb on - strand, within PfGW456L13_1068 at 1183.431 kb on + strand, within PfGW456L13_1068 at 1183.431 kb on + strand, within PfGW456L13_1068 at 1183.432 kb on - strand, within PfGW456L13_1068 at 1183.432 kb on - strand, within PfGW456L13_1068 at 1183.432 kb on - strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.459 kb on + strand, within PfGW456L13_1068 at 1183.460 kb on - strand, within PfGW456L13_1068 at 1183.483 kb on - strand, within PfGW456L13_1068 at 1183.571 kb on + strand at 1183.621 kb on + strand at 1183.621 kb on + strand at 1183.636 kb on + strand at 1183.678 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 1,182,632 - PfGW456L13_1066 0.78 +0.6 1,183,102 + PfGW456L13_1067 0.81 -0.6 1,183,102 + PfGW456L13_1067 0.81 -0.6 1,183,102 + PfGW456L13_1067 0.81 -1.2 1,183,103 - PfGW456L13_1067 0.82 -2.1 1,183,103 - PfGW456L13_1067 0.82 -0.7 1,183,159 - -0.8 1,183,211 + -0.1 1,183,212 - -0.0 1,183,335 + PfGW456L13_1068 0.41 +0.2 1,183,335 + PfGW456L13_1068 0.41 -0.8 1,183,352 + PfGW456L13_1068 0.46 -0.1 1,183,393 - PfGW456L13_1068 0.58 +0.4 1,183,431 + PfGW456L13_1068 0.70 -0.7 1,183,431 + PfGW456L13_1068 0.70 -0.6 1,183,432 - PfGW456L13_1068 0.70 -0.6 1,183,432 - PfGW456L13_1068 0.70 -1.2 1,183,432 - PfGW456L13_1068 0.70 -0.0 1,183,459 + PfGW456L13_1068 0.78 -1.0 1,183,459 + PfGW456L13_1068 0.78 +1.9 1,183,459 + PfGW456L13_1068 0.78 +0.7 1,183,459 + PfGW456L13_1068 0.78 +0.2 1,183,459 + PfGW456L13_1068 0.78 -1.9 1,183,459 + PfGW456L13_1068 0.78 +0.4 1,183,460 - PfGW456L13_1068 0.79 +0.2 1,183,483 - PfGW456L13_1068 0.86 +1.6 1,183,571 + -2.0 1,183,621 + -2.0 1,183,621 + -0.6 1,183,636 + +0.0 1,183,678 + -0.7
Or see this region's nucleotide sequence