Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1057

Experiment: D-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (N)
1,170,724	+		PfGW456L13_1055	0.56	-0.3
1,170,724	+		PfGW456L13_1055	0.56	+0.2
1,170,724	+		PfGW456L13_1055	0.56	+1.1
1,170,724	+		PfGW456L13_1055	0.56	-2.3
1,170,724	+		PfGW456L13_1055	0.56	-0.1
1,170,725	-		PfGW456L13_1055	0.56	-0.1
1,170,725	-		PfGW456L13_1055	0.56	+0.2
1,170,725	-		PfGW456L13_1055	0.56	-0.1
1,170,725	-		PfGW456L13_1055	0.56	+1.6
1,170,730	+		PfGW456L13_1055	0.56	+0.2
1,170,730	+		PfGW456L13_1055	0.56	+0.3
1,170,730	+		PfGW456L13_1055	0.56	-0.5
1,170,730	+		PfGW456L13_1055	0.56	+0.1
1,170,730	+		PfGW456L13_1055	0.56	+0.3
1,170,730	+		PfGW456L13_1055	0.56	-2.8
1,170,731	-		PfGW456L13_1055	0.57	+0.6
1,170,731	-		PfGW456L13_1055	0.57	+1.0
1,170,731	-		PfGW456L13_1055	0.57	-1.0
1,170,731	-		PfGW456L13_1055	0.57	+0.5
1,170,775	+		PfGW456L13_1055	0.62	-0.4
1,170,776	-		PfGW456L13_1055	0.62	-0.1
1,170,913	+		PfGW456L13_1055	0.78	+1.5
1,170,913	+		PfGW456L13_1055	0.78	+0.4
1,170,914	-		PfGW456L13_1055	0.79	-0.4
1,170,914	-		PfGW456L13_1055	0.79	+1.0
1,170,983	+		PfGW456L13_1055	0.87	+1.1
1,170,983	+		PfGW456L13_1055	0.87	-1.1
1,170,983	+		PfGW456L13_1055	0.87	-0.9
1,170,984	-		PfGW456L13_1055	0.87	+1.0
1,170,984	-		PfGW456L13_1055	0.87	+0.8
1,170,984	-		PfGW456L13_1055	0.87	+0.5
1,171,071	+				-0.7
1,171,071	+				+0.6
1,171,072	-				+0.3
1,171,072	-				-1.0
1,171,072	-				+0.3
1,171,072	-				+1.0
1,171,073	+				-0.8
1,171,073	+				+0.3
1,171,073	+				+0.4
1,171,073	+				-0.4
1,171,074	-				-0.6
1,171,123	+				-0.6
1,171,123	+				+2.4
1,171,124	-				+1.0
1,171,169	+		PfGW456L13_1056	0.12	-3.1
1,171,169	+		PfGW456L13_1056	0.12	+0.2
1,171,169	+		PfGW456L13_1056	0.12	+0.8
1,171,169	+		PfGW456L13_1056	0.12	+0.3
1,171,169	+		PfGW456L13_1056	0.12	+0.6
1,171,169	+		PfGW456L13_1056	0.12	+0.5
1,171,170	-		PfGW456L13_1056	0.12	-1.1
1,171,170	-		PfGW456L13_1056	0.12	+2.0
1,171,170	-		PfGW456L13_1056	0.12	+3.2
1,171,170	-		PfGW456L13_1056	0.12	+1.2
1,171,170	-		PfGW456L13_1056	0.12	-0.5
1,171,170	-		PfGW456L13_1056	0.12	-0.4
1,171,170	-		PfGW456L13_1056	0.12	+0.5
1,171,170	-		PfGW456L13_1056	0.12	-2.1
1,171,170	-		PfGW456L13_1056	0.12	+1.7
1,171,409	+		PfGW456L13_1056	0.74	-1.1
1,171,409	+		PfGW456L13_1056	0.74	+0.6
1,171,409	+		PfGW456L13_1056	0.74	+1.0
1,171,409	+		PfGW456L13_1056	0.74	+0.4
1,171,409	+		PfGW456L13_1056	0.74	+0.0
1,171,409	+		PfGW456L13_1056	0.74	-0.0
1,171,409	+		PfGW456L13_1056	0.74	+0.3
1,171,410	-		PfGW456L13_1056	0.74	-2.1
1,171,410	-		PfGW456L13_1056	0.74	+0.8
1,171,421	+		PfGW456L13_1056	0.77	-0.4
1,171,422	-		PfGW456L13_1056	0.78	+0.1
1,171,578	-				+1.6
1,171,578	-				-0.1
1,171,602	+				-3.1
1,171,602	+				-0.1
1,171,602	+				-1.2
1,171,602	+				-2.1
1,171,603	-				-0.5
1,171,603	-				+0.8
1,171,603	-				+0.6
1,171,603	-				-0.0
1,171,606	+				-0.1
1,171,607	-				+0.4
1,171,607	-				+0.8
1,171,907	+		PfGW456L13_1057	0.24	-1.7
1,171,908	-		PfGW456L13_1057	0.24	-0.0
1,171,925	-		PfGW456L13_1057	0.25	-2.5
1,171,982	+		PfGW456L13_1057	0.30	-2.8
1,171,982	+				-0.4
1,171,982	+		PfGW456L13_1057	0.30	-0.2
1,171,982	+		PfGW456L13_1057	0.30	-1.2
1,171,982	+		PfGW456L13_1057	0.30	-3.5
1,171,982	+		PfGW456L13_1057	0.30	-3.1
1,171,982	+		PfGW456L13_1057	0.30	+0.2
1,171,982	+		PfGW456L13_1057	0.30	-0.7
1,171,983	-		PfGW456L13_1057	0.30	-1.2
1,171,983	-		PfGW456L13_1057	0.30	-1.1
1,171,983	-		PfGW456L13_1057	0.30	-2.1
1,171,983	-		PfGW456L13_1057	0.30	-1.0
1,171,983	-		PfGW456L13_1057	0.30	-3.0
1,171,983	-		PfGW456L13_1057	0.30	-1.9
1,171,983	-		PfGW456L13_1057	0.30	-1.3
1,171,983	-		PfGW456L13_1057	0.30	-0.1
1,171,983	-		PfGW456L13_1057	0.30	-1.8
1,171,983	-		PfGW456L13_1057	0.30	-1.0
1,171,983	-		PfGW456L13_1057	0.30	+1.6
1,171,983	-		PfGW456L13_1057	0.30	-0.5
1,172,138	+		PfGW456L13_1057	0.43	-3.6
1,172,283	-		PfGW456L13_1057	0.56	+0.2
1,172,387	+		PfGW456L13_1057	0.64	-2.7
1,172,387	+		PfGW456L13_1057	0.64	-2.1
1,172,388	-		PfGW456L13_1057	0.64	-0.9
1,172,388	-		PfGW456L13_1057	0.64	-2.0
1,172,388	-		PfGW456L13_1057	0.64	-1.2
1,172,432	+		PfGW456L13_1057	0.68	-1.7
1,172,445	-		PfGW456L13_1057	0.69	-2.5
1,172,495	+		PfGW456L13_1057	0.74	-1.0
1,172,495	+		PfGW456L13_1057	0.74	-2.2
1,172,496	-		PfGW456L13_1057	0.74	-3.5
1,172,496	-		PfGW456L13_1057	0.74	-1.2
1,172,496	-		PfGW456L13_1057	0.74	-3.4
1,172,687	+		PfGW456L13_1057	0.90	-0.1
1,172,687	+		PfGW456L13_1057	0.90	-2.6
1,172,687	+		PfGW456L13_1057	0.90	-0.8
1,172,688	-		PfGW456L13_1057	0.90	-2.3
1,172,862	-				-0.4
1,172,867	+				-0.4
1,172,870	+				-0.6
1,172,870	+				-0.4
1,172,870	+				+0.4
1,172,870	+				-0.6
1,172,871	-				+1.2
1,172,876	+				+0.7
1,172,945	+				+1.1
1,172,945	+				-0.3
1,172,945	+				+0.5
1,172,945	+				-0.3
1,172,946	-				-0.4
1,172,946	-				+0.2
1,172,946	-				+1.8
1,172,962	+				+0.2
1,172,962	+				-0.4
1,172,962	+				+0.9
1,172,962	+				-1.1
1,172,962	+				-1.2
1,172,962	+				+0.6
1,172,962	+				-1.2
1,172,962	+				+0.7
1,172,962	+				-1.9
1,172,963	-				+0.7
1,172,963	-				+1.1
1,172,963	-				-1.5
1,172,963	-				-0.2
1,172,963	-				+0.1
1,172,963	-				+0.9
1,172,963	-				+0.7
1,172,963	-				-1.7
1,173,303	+		PfGW456L13_1058	0.81	+1.9
1,173,303	+		PfGW456L13_1058	0.81	-1.2
1,173,303	+		PfGW456L13_1058	0.81	-0.5
1,173,303	+		PfGW456L13_1058	0.81	+1.1
1,173,304	-		PfGW456L13_1058	0.82	+0.4
1,173,304	-		PfGW456L13_1058	0.82	+1.2
1,173,365	+				+1.1
1,173,395	+				+0.2
1,173,466	+				+0.1
1,173,466	+				+1.5
1,173,466	+				+0.3
1,173,466	+				+0.3
1,173,466	+				-0.9
1,173,466	+				+0.5
1,173,467	-				+1.1
1,173,467	-				-0.9
1,173,467	-				-0.6
1,173,467	-				+1.2
1,173,467	-				-0.4
1,173,468	+				+0.9
1,173,468	+				-1.2
1,173,468	+				+0.9
1,173,468	+				+0.5
1,173,469	-				-0.9
1,173,469	-				-2.1
1,173,469	-				-0.4
1,173,469	-				+2.0
1,173,469	-				-1.1
1,173,556	+				+0.3
1,173,556	+				-0.2
1,173,556	+				+0.2
1,173,557	-				-0.3
1,173,557	-				+1.1
1,173,557	-				+0.3
1,173,560	+				+1.4
1,173,560	+				-1.5
1,173,560	+				+0.3
1,173,561	-				+0.7
1,173,561	-				+0.1
1,173,561	-				+0.7
1,173,561	-				+0.1