Strain Fitness in Pseudomonas putida KT2440 around PP_4316

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
4,905,869	+		PP_4314	0.69	-0.8
4,905,869	+		PP_4314	0.69	+0.5
4,905,876	-		PP_4314	0.70	-0.1
4,905,977	+				+0.4
4,905,978	-				+0.2
4,905,978	-				+0.5
4,905,978	-				-0.5
4,905,980	-				-0.4
4,905,980	-				+3.1
4,905,980	-				+0.2
4,906,007	+				-0.2
4,906,008	-				+0.0
4,906,010	+				-1.0
4,906,010	+				-0.5
4,906,011	-				+0.8
4,906,011	-				+0.2
4,906,016	+				+0.6
4,906,016	+				-1.5
4,906,016	+				-1.1
4,906,016	+				-0.3
4,906,016	+				-3.0
4,906,016	+				-0.5
4,906,016	+				+0.1
4,906,016	+				-0.6
4,906,016	+				-0.4
4,906,016	+				+0.5
4,906,016	+				+2.1
4,906,017	-				-0.1
4,906,017	-				+0.1
4,906,017	-				-0.5
4,906,017	-				-0.0
4,906,034	+				+0.0
4,906,035	-				+0.5
4,906,355	+		PP_4315	0.44	-0.8
4,906,355	+		PP_4315	0.44	+0.2
4,906,355	+				-0.8
4,906,355	+		PP_4315	0.44	+0.9
4,906,355	+		PP_4315	0.44	+0.4
4,906,355	+		PP_4315	0.44	-0.3
4,906,356	-		PP_4315	0.44	-1.1
4,906,356	-		PP_4315	0.44	-0.5
4,906,365	+		PP_4315	0.45	+0.2
4,906,365	+		PP_4315	0.45	+0.6
4,906,365	+		PP_4315	0.45	-0.2
4,906,366	-		PP_4315	0.45	-1.1
4,906,370	+		PP_4315	0.46	+0.7
4,906,371	-		PP_4315	0.46	-0.5
4,906,371	-		PP_4315	0.46	-0.3
4,906,559	+		PP_4315	0.70	+0.5
4,906,559	+		PP_4315	0.70	-1.4
4,906,560	-		PP_4315	0.70	+0.4
4,906,575	+		PP_4315	0.72	-0.4
4,906,575	+		PP_4315	0.72	-0.2
4,906,575	+		PP_4315	0.72	-0.4
4,906,575	+		PP_4315	0.72	+0.4
4,906,576	-		PP_4315	0.72	-0.4
4,906,576	-				-0.1
4,906,652	+		PP_4315	0.81	+0.6
4,906,652	+		PP_4315	0.81	+1.5
4,906,653	-		PP_4315	0.82	+0.3
4,906,835	+				-0.1
4,906,836	-				-1.4
4,907,024	+		PP_4316	0.19	-0.5
4,907,025	-		PP_4316	0.19	+0.5
4,907,118	+		PP_4316	0.29	-1.3
4,907,247	+		PP_4316	0.42	-0.8
4,907,248	-		PP_4316	0.42	-1.4
4,907,248	-		PP_4316	0.42	-0.9
4,907,280	+		PP_4316	0.46	-1.5
4,907,280	+		PP_4316	0.46	-1.1
4,907,280	+		PP_4316	0.46	+0.7
4,907,280	+		PP_4316	0.46	-0.8
4,907,557	-		PP_4316	0.75	-0.8
4,907,618	+		PP_4316	0.82	-0.9
4,907,745	+				+0.9
4,907,745	+				-0.3
4,907,818	+				-0.4
4,907,818	+				-0.6
4,907,838	+				+0.3
4,907,839	-				-0.0
4,907,853	+		PP_4317	0.13	-0.7
4,907,869	+		PP_4317	0.21	+0.7
4,907,870	-		PP_4317	0.22	+0.7