Strain Fitness in Pseudomonas putida KT2440 around PP_3519

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
3,992,374	+		PP_3518	0.52	+0.3
3,992,374	+		PP_3518	0.52	+0.4
3,992,374	+		PP_3518	0.52	+1.0
3,992,377	+		PP_3518	0.52	+1.1
3,992,377	+		PP_3518	0.52	+0.2
3,992,377	+		PP_3518	0.52	-1.0
3,992,377	+		PP_3518	0.52	-0.4
3,992,377	+		PP_3518	0.52	+0.6
3,992,378	-		PP_3518	0.52	+0.0
3,992,378	-		PP_3518	0.52	-0.6
3,992,378	-		PP_3518	0.52	+0.4
3,992,378	-		PP_3518	0.52	+0.9
3,992,378	-		PP_3518	0.52	+0.4
3,992,378	-		PP_3518	0.52	+0.1
3,992,413	+		PP_3518	0.55	+0.4
3,992,413	+		PP_3518	0.55	+0.2
3,992,413	+		PP_3518	0.55	-0.0
3,992,429	+		PP_3518	0.56	-0.4
3,992,431	+		PP_3518	0.56	-2.4
3,992,431	+				+1.6
3,992,432	-		PP_3518	0.56	+0.5
3,992,432	-		PP_3518	0.56	-1.1
3,992,432	-		PP_3518	0.56	+0.6
3,992,432	-		PP_3518	0.56	-0.4
3,992,443	+		PP_3518	0.57	-0.2
3,992,443	+		PP_3518	0.57	+0.6
3,992,443	+		PP_3518	0.57	-0.4
3,992,443	+		PP_3518	0.57	-0.1
3,992,443	+		PP_3518	0.57	-0.2
3,992,443	+		PP_3518	0.57	+1.2
3,992,443	+		PP_3518	0.57	+0.0
3,992,444	-		PP_3518	0.57	-1.8
3,992,444	-		PP_3518	0.57	+0.8
3,992,444	-		PP_3518	0.57	-1.6
3,992,444	-		PP_3518	0.57	+0.9
3,992,444	-		PP_3518	0.57	-0.8
3,992,444	-		PP_3518	0.57	+0.8
3,992,562	+		PP_3518	0.65	+0.3
3,992,739	+		PP_3518	0.77	+0.8
3,992,739	+		PP_3518	0.77	-0.9
3,992,744	+		PP_3518	0.78	-0.1
3,992,887	+		PP_3518	0.87	+0.5
3,992,887	+		PP_3518	0.87	-0.2
3,992,887	+		PP_3518	0.87	-0.3
3,992,887	+		PP_3518	0.87	+0.9
3,992,888	-		PP_3518	0.87	-1.2
3,992,950	-				-0.8
3,993,074	-				+0.7
3,993,107	+				-0.1
3,993,107	+				-0.1
3,993,189	+				-0.4
3,993,190	-				+0.4
3,993,190	-				+1.1
3,993,190	-				+0.3
3,993,190	-				-0.2
3,993,191	+				+0.3
3,993,191	+				+0.2
3,993,225	-				-0.8
3,993,292	+				-0.1
3,993,293	-				-0.8
3,993,308	+				-0.2
3,993,408	-		PP_3519	0.37	-1.1
3,993,605	+				-0.6
3,993,605	+				+0.5
3,993,605	+				-0.5
3,993,612	+				-1.8
3,993,860	+		PP_3520	0.30	+0.7
3,993,861	-		PP_3520	0.30	+0.1
3,993,911	+		PP_3520	0.37	-0.8
3,993,911	+		PP_3520	0.37	-0.3
3,993,912	-		PP_3520	0.37	-0.1
3,993,912	-		PP_3520	0.37	+0.1
3,993,951	-		PP_3520	0.42	-0.9
3,993,957	+		PP_3520	0.43	+0.4
3,993,958	-				+0.2
3,993,958	-		PP_3520	0.43	-0.4
3,993,971	+		PP_3520	0.45	-0.8
3,993,972	-		PP_3520	0.45	-0.8
3,994,004	+		PP_3520	0.50	-0.5
3,994,004	+		PP_3520	0.50	-0.7
3,994,005	-		PP_3520	0.50	+0.8
3,994,013	+		PP_3520	0.51	-0.6
3,994,014	-		PP_3520	0.51	+0.2
3,994,199	-		PP_3520	0.77	-0.8
3,994,199	-		PP_3520	0.77	+0.2
3,994,257	+		PP_3520	0.85	-0.6
3,994,258	-		PP_3520	0.85	+0.2
3,994,262	+		PP_3520	0.85	-0.3
3,994,315	+				-1.2
3,994,315	+				-0.5
3,994,315	+				-1.2
3,994,315	+				-0.1
3,994,315	+				-0.5
3,994,315	+				+0.5
3,994,316	-				+1.1
3,994,316	-				-0.0
3,994,316	-				-0.8
3,994,316	-				+1.2
3,994,319	+				-0.4
3,994,320	-				-0.6
3,994,320	-				-0.3
3,994,550	+		PP_3521	0.21	-0.0
3,994,551	-		PP_3521	0.22	-0.2