Strain Fitness in Pseudomonas putida KT2440 around PP_3377

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
3,821,038	+		PP_3376	0.12	+0.8
3,821,039	-		PP_3376	0.13	-0.1
3,821,046	+		PP_3376	0.13	-1.8
3,821,189	-		PP_3376	0.28	+0.0
3,821,227	+		PP_3376	0.32	+0.6
3,821,227	+		PP_3376	0.32	+2.4
3,821,321	+		PP_3376	0.42	-0.3
3,821,322	-		PP_3376	0.42	+1.4
3,821,322	-		PP_3376	0.42	+0.3
3,821,437	+		PP_3376	0.54	+0.1
3,821,438	-		PP_3376	0.54	-0.4
3,821,643	-		PP_3376	0.75	+0.1
3,821,856	+				-0.2
3,821,858	+				-1.0
3,821,950	+				-0.5
3,821,951	-				+0.6
3,821,951	-				+0.0
3,822,006	+				+0.2
3,822,007	-				-0.9
3,822,007	-				+0.4
3,822,043	-		PP_3377	0.12	+0.9
3,822,162	+		PP_3377	0.21	-0.0
3,822,171	+		PP_3377	0.22	+0.9
3,822,171	+		PP_3377	0.22	-0.3
3,822,171	+				+0.6
3,822,171	+		PP_3377	0.22	+0.6
3,822,172	-		PP_3377	0.22	-0.5
3,822,172	-		PP_3377	0.22	-1.0
3,822,172	-		PP_3377	0.22	+0.0
3,822,172	-		PP_3377	0.22	-0.5
3,822,204	+		PP_3377	0.24	+0.2
3,822,204	+		PP_3377	0.24	-1.4
3,822,204	+		PP_3377	0.24	-0.3
3,822,237	+		PP_3377	0.27	+0.6
3,822,237	+		PP_3377	0.27	+0.9
3,822,237	+		PP_3377	0.27	-0.4
3,822,238	-		PP_3377	0.27	-0.1
3,822,238	-		PP_3377	0.27	+0.8
3,822,246	+		PP_3377	0.27	+0.2
3,822,246	+		PP_3377	0.27	-0.3
3,822,246	+		PP_3377	0.27	+0.2
3,822,246	+		PP_3377	0.27	+0.2
3,822,247	-		PP_3377	0.28	+1.7
3,822,247	-		PP_3377	0.28	-0.7
3,822,247	-		PP_3377	0.28	-0.2
3,822,247	-		PP_3377	0.28	+0.3
3,822,441	+		PP_3377	0.43	-0.3
3,822,442	-		PP_3377	0.43	+0.1
3,822,466	-		PP_3377	0.44	+0.9
3,822,466	-		PP_3377	0.44	+0.5
3,822,466	-		PP_3377	0.44	-0.3
3,822,513	+		PP_3377	0.48	+0.0
3,822,513	+		PP_3377	0.48	-0.4
3,822,514	-		PP_3377	0.48	+1.6
3,822,521	+		PP_3377	0.49	+0.0
3,822,521	+		PP_3377	0.49	-0.1
3,822,522	-		PP_3377	0.49	+0.2
3,822,533	-		PP_3377	0.50	-0.6
3,822,533	-		PP_3377	0.50	+0.9
3,822,691	-		PP_3377	0.62	-0.3
3,822,691	-		PP_3377	0.62	-0.6
3,822,807	+				+1.9
3,822,807	+		PP_3377	0.71	-0.6
3,822,808	-		PP_3377	0.71	+1.0
3,822,876	+		PP_3377	0.76	+0.9
3,822,877	-		PP_3377	0.76	+0.0
3,822,946	-		PP_3377	0.82	+0.1
3,822,969	+		PP_3377	0.83	+2.0
3,822,970	-		PP_3377	0.83	+0.2
3,822,970	-		PP_3377	0.83	-0.1
3,823,089	+				+0.1
3,823,090	-				-2.0
3,823,146	+				+0.4
3,823,146	+				-0.7
3,823,147	-				-0.3
3,823,147	-				+0.9
3,823,147	-				+0.3
3,823,147	-				-0.7
3,823,147	-				+0.4
3,823,261	+				+1.0
3,823,262	-				-1.1
3,823,262	-				+0.5
3,823,931	-		PP_3378	0.73	+0.2
3,823,931	-		PP_3378	0.73	-0.2