Strain Fitness in Pseudomonas putida KT2440 around PP_2873

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
3,274,483	+		PP_2872	0.27	-2.0
3,274,483	+		PP_2872	0.27	+0.3
3,274,483	+		PP_2872	0.27	+1.2
3,274,483	+		PP_2872	0.27	+1.0
3,274,483	+		PP_2872	0.27	-0.4
3,274,484	-		PP_2872	0.27	-0.0
3,274,484	-		PP_2872	0.27	-1.1
3,274,484	-		PP_2872	0.27	-0.1
3,274,720	-		PP_2872	0.54	+0.1
3,274,848	+		PP_2872	0.68	+0.5
3,274,848	+		PP_2872	0.68	-0.6
3,274,849	-		PP_2872	0.68	-0.8
3,274,849	-		PP_2872	0.68	+0.4
3,274,879	+		PP_2872	0.72	+0.3
3,274,879	+		PP_2872	0.72	+0.4
3,274,880	-		PP_2872	0.72	-0.3
3,274,880	-		PP_2872	0.72	-0.2
3,275,082	-				+0.0
3,275,082	-				-0.6
3,275,134	+				-1.1
3,275,134	+				-0.1
3,275,135	-				-0.7
3,275,159	-				-0.4
3,275,246	+		PP_2873	0.15	-1.1
3,275,246	+		PP_2873	0.15	-0.3
3,275,285	+		PP_2873	0.27	-0.5
3,275,286	-		PP_2873	0.27	-0.7
3,275,286	-		PP_2873	0.27	+0.7
3,275,286	-		PP_2873	0.27	+0.7
3,275,464	-		PP_2873	0.83	-0.1
3,275,484	+		PP_2873	0.89	-0.9
3,275,484	+		PP_2873	0.89	-1.8
3,275,516	+				-0.1
3,275,516	+				+0.5
3,275,517	-				+0.1
3,275,913	+				+0.1
3,275,913	+				-0.3
3,276,014	+				-0.4
3,276,014	+				+0.1
3,276,140	+		PP_2874	0.49	+1.0
3,276,141	-		PP_2874	0.49	-0.2
3,276,141	-		PP_2874	0.49	+0.4
3,276,173	+		PP_2874	0.60	+1.0
3,276,173	+		PP_2874	0.60	-0.3
3,276,173	+		PP_2874	0.60	+0.3
3,276,173	+		PP_2874	0.60	+0.0
3,276,173	+		PP_2874	0.60	+0.5
3,276,174	-		PP_2874	0.60	+0.1
3,276,174	-		PP_2874	0.60	-0.3
3,276,174	-		PP_2874	0.60	-0.0
3,276,174	-		PP_2874	0.60	-0.4
3,276,174	-		PP_2874	0.60	+0.5
3,276,174	-		PP_2874	0.60	-0.3
3,276,174	-		PP_2874	0.60	-0.6
3,276,177	-		PP_2874	0.61	-0.8
3,276,312	-				+0.3
3,276,466	+		PP_2875	0.34	-2.2
3,276,485	-		PP_2875	0.40	+1.0